Isodon delavayi chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067655.1 · 11–85 bp · −
psbA · NC_067655.1 · 393–1,451 bp · −
trnK-UUU · NC_067655.1 · 1,683–4,263 bp · −
matK · NC_067655.1 · 2,003–3,523 bp · −
ON980_pgp086 · NC_067655.1 · 4,788–5,933 bp · −
trnQ-UUG · NC_067655.1 · 6,879–6,950 bp · −
trnS-GCU · NC_067655.1 · 8,183–8,270 bp · −
atpA · NC_067655.1 · 10,158–11,681 bp · −
atpF · NC_067655.1 · 11,790–13,034 bp · −
atpH · NC_067655.1 · 13,326–13,571 bp · −
atpI · NC_067655.1 · 14,572–15,315 bp · −
rps2 · NC_067655.1 · 15,541–16,251 bp · −
rpoC2 · NC_067655.1 · 16,469–20,650 bp · −
rpoC1 · NC_067655.1 · 20,815–23,648 bp · −
rpoB · NC_067655.1 · 23,675–26,887 bp · −
psbM · NC_067655.1 · 29,391–29,495 bp · −
trnD-GUC · NC_067655.1 · 30,014–30,087 bp · −
trnY-GUA · NC_067655.1 · 30,198–30,281 bp · −
trnE-UUC · NC_067655.1 · 30,359–30,431 bp · −
trnS-UGA · NC_067655.1 · 35,096–35,188 bp · −
trnfM-CAU · NC_067655.1 · 36,220–36,293 bp · −
rps14 · NC_067655.1 · 36,440–36,742 bp · −
psaB · NC_067655.1 · 36,865–39,069 bp · −
psaA · NC_067655.1 · 39,095–41,347 bp · −
ycf3 · NC_067655.1 · 42,122–44,069 bp · −
rps4 · NC_067655.1 · 45,316–45,921 bp · −
trnT-UGU · NC_067655.1 · 46,316–46,388 bp · −
ndhJ · NC_067655.1 · 48,673–49,149 bp · −
ndhK · NC_067655.1 · 49,260–49,937 bp · −
ndhC · NC_067655.1 · 49,989–50,351 bp · −
trnV-UAC · NC_067655.1 · 51,308–51,963 bp · −
atpE · NC_067655.1 · 52,417–52,818 bp · −
atpB · NC_067655.1 · 52,815–54,311 bp · −
psbJ · NC_067655.1 · 64,017–64,139 bp · −
psbL · NC_067655.1 · 64,274–64,390 bp · −
psbF · NC_067655.1 · 64,414–64,533 bp · −
psbE · NC_067655.1 · 64,548–64,799 bp · −
trnW-CCA · NC_067655.1 · 66,219–66,292 bp · −
trnP-UGG · NC_067655.1 · 66,461–66,534 bp · −
rpl20 · NC_067655.1 · 68,322–68,708 bp · −
rps12 · NC_067655.1 · 69,443–69,556 bp · −
rps12 · NC_067655.1 · 96,847–97,639 bp · −
clpP · NC_067655.1 · 69,675–71,594 bp · −
psbN · NC_067655.1 · 73,944–74,075 bp · −
rpoA · NC_067655.1 · 77,449–78,456 bp · −
rps11 · NC_067655.1 · 78,528–78,944 bp · −
rpl36 · NC_067655.1 · 79,060–79,173 bp · −
infA · NC_067655.1 · 79,269–79,502 bp · −
rps8 · NC_067655.1 · 79,630–80,034 bp · −
rpl14 · NC_067655.1 · 80,217–80,585 bp · −
rpl16 · NC_067655.1 · 80,719–81,979 bp · −
rps3 · NC_067655.1 · 82,123–82,785 bp · −
rpl22 · NC_067655.1 · 82,770–83,243 bp · −
rps19 · NC_067655.1 · 83,308–83,586 bp · −
rpl2 · NC_067655.1 · 83,654–85,132 bp · −
rpl23 · NC_067655.1 · 85,151–85,432 bp · −
trnI-CAU · NC_067655.1 · 85,598–85,671 bp · −
trnL-CAA · NC_067655.1 · 93,196–93,276 bp · −
ndhB · NC_067655.1 · 93,848–96,055 bp · −
rps7 · NC_067655.1 · 96,326–96,793 bp · −
trnN-GUU · NC_067655.1 · 107,789–107,860 bp · −
ndhF · NC_067655.1 · 109,226–111,457 bp · −
ndhD · NC_067655.1 · 114,239–115,768 bp · −
psaC · NC_067655.1 · 115,859–116,104 bp · −
ndhE · NC_067655.1 · 116,360–116,665 bp · −
ndhG · NC_067655.1 · 116,881–117,411 bp · −
ndhI · NC_067655.1 · 117,771–118,277 bp · −
ndhA · NC_067655.1 · 118,358–120,481 bp · −
ndhH · NC_067655.1 · 120,483–121,664 bp · −
rps15 · NC_067655.1 · 121,779–122,051 bp · −
ycf1 · NC_067655.1 · 122,481–128,003 bp · −
trnR-ACG · NC_067655.1 · 128,983–129,056 bp · −
rrn5 · NC_067655.1 · 129,290–129,410 bp · −
rrn4.5 · NC_067655.1 · 129,666–129,768 bp · −
rrn23 · NC_067655.1 · 129,867–132,677 bp · −
trnA-UGC · NC_067655.1 · 132,849–133,735 bp · −
trnI-GAU · NC_067655.1 · 133,800–134,818 bp · −
rrn16 · NC_067655.1 · 135,116–136,606 bp · −
trnV-GAC · NC_067655.1 · 136,833–136,904 bp · −
ycf15 · NC_067655.1 · 143,270–143,419 bp · −
ycf2 · NC_067655.1 · 143,609–150,439 bp · −
psbK · NC_067655.1 · 7,344–7,529 bp · +
psbI · NC_067655.1 · 7,917–8,027 bp · +
trnG-UCC · NC_067655.1 · 9,033–9,792 bp · +
trnR-UCU · NC_067655.1 · 9,983–10,054 bp · +
trnC-GCA · NC_067655.1 · 28,077–28,147 bp · +
petN · NC_067655.1 · 28,310–28,399 bp · +
trnT-GGU · NC_067655.1 · 31,041–31,112 bp · +
psbD · NC_067655.1 · 32,430–33,491 bp · +
psbC · NC_067655.1 · 33,439–34,860 bp · +
psbZ · NC_067655.1 · 35,529–35,717 bp · +
trnG-GCC · NC_067655.1 · 35,962–36,032 bp · +
trnS-GGA · NC_067655.1 · 44,933–45,019 bp · +
trnL-UAA · NC_067655.1 · 47,075–47,639 bp · +
trnF-GAA · NC_067655.1 · 47,933–48,005 bp · +
trnM-CAU · NC_067655.1 · 52,144–52,216 bp · +
rbcL · NC_067655.1 · 55,102–56,535 bp · +
accD · NC_067655.1 · 57,234–58,715 bp · +
psaI · NC_067655.1 · 59,416–59,526 bp · +
ycf4 · NC_067655.1 · 59,973–60,527 bp · +
cemA · NC_067655.1 · 61,111–61,800 bp · +
petA · NC_067655.1 · 62,015–62,977 bp · +
petL · NC_067655.1 · 65,713–65,808 bp · +
petG · NC_067655.1 · 65,983–66,096 bp · +
psaJ · NC_067655.1 · 66,816–66,950 bp · +
rpl33 · NC_067655.1 · 67,414–67,614 bp · +
rps18 · NC_067655.1 · 67,781–68,086 bp · +
rps12 · NC_067655.1 · 138,566–139,358 bp · +
psbB · NC_067655.1 · 72,067–73,593 bp · +
psbT · NC_067655.1 · 73,777–73,878 bp · +
psbH · NC_067655.1 · 74,181–74,399 bp · +
petB · NC_067655.1 · 74,525–75,891 bp · +
petD · NC_067655.1 · 76,080–77,272 bp · +
ycf2 · NC_067655.1 · 85,766–92,596 bp · +
ycf15 · NC_067655.1 · 92,786–92,935 bp · +
trnV-GAC · NC_067655.1 · 99,301–99,372 bp · +
rrn16 · NC_067655.1 · 99,599–101,089 bp · +
trnI-GAU · NC_067655.1 · 101,387–102,405 bp · +
trnA-UGC · NC_067655.1 · 102,470–103,356 bp · +
rrn23 · NC_067655.1 · 103,528–106,338 bp · +
rrn4.5 · NC_067655.1 · 106,437–106,539 bp · +
rrn5 · NC_067655.1 · 106,795–106,915 bp · +
trnR-ACG · NC_067655.1 · 107,149–107,222 bp · +
ycf1 · NC_067655.1 · 108,202–109,332 bp · +
rpl32 · NC_067655.1 · 111,933–112,103 bp · +
trnL-UAG · NC_067655.1 · 112,868–112,947 bp · +
ccsA · NC_067655.1 · 113,036–114,007 bp · +
trnN-GUU · NC_067655.1 · 128,345–128,416 bp · +
rps7 · NC_067655.1 · 139,412–139,879 bp · +
ndhB · NC_067655.1 · 140,150–142,357 bp · +
trnL-CAA · NC_067655.1 · 142,929–143,009 bp · +
trnI-CAU · NC_067655.1 · 150,534–150,607 bp · +
rpl23 · NC_067655.1 · 150,773–151,054 bp · +
rpl2 · NC_067655.1 · 151,073–152,551 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon delavayi
ANNOTATED PLASTOME
NC_067655.1
152,661 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38165 76330 114496 152661 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK ON980_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1683 4263 2581 Locate
matK gene − 2003 3523 1521 Locate
ON980_pgp086 gene − 4788 5933 1146 Locate
trnQ-UUG gene − 6879 6950 72 Locate
psbK gene + 7344 7529 186 Locate
psbI gene + 7917 8027 111 Locate
trnS-GCU gene − 8183 8270 88 Locate
trnG-UCC gene + 9033 9792 760 Locate
trnR-UCU gene + 9983 10054 72 Locate
atpA gene − 10158 11681 1524 Locate
atpF gene − 11790 13034 1245 Locate
atpH gene − 13326 13571 246 Locate
atpI gene − 14572 15315 744 Locate
rps2 gene − 15541 16251 711 Locate
rpoC2 gene − 16469 20650 4182 Locate
rpoC1 gene − 20815 23648 2834 Locate
rpoB gene − 23675 26887 3213 Locate
trnC-GCA gene + 28077 28147 71 Locate
petN gene + 28310 28399 90 Locate
psbM gene − 29391 29495 105 Locate
trnD-GUC gene − 30014 30087 74 Locate
trnY-GUA gene − 30198 30281 84 Locate
trnE-UUC gene − 30359 30431 73 Locate
trnT-GGU gene + 31041 31112 72 Locate
psbD gene + 32430 33491 1062 Locate
psbC gene + 33439 34860 1422 Locate
trnS-UGA gene − 35096 35188 93 Locate
psbZ gene + 35529 35717 189 Locate
trnG-GCC gene + 35962 36032 71 Locate
trnfM-CAU gene − 36220 36293 74 Locate
rps14 gene − 36440 36742 303 Locate
psaB gene − 36865 39069 2205 Locate
psaA gene − 39095 41347 2253 Locate
ycf3 gene − 42122 44069 1948 Locate
trnS-GGA gene + 44933 45019 87 Locate
rps4 gene − 45316 45921 606 Locate
trnT-UGU gene − 46316 46388 73 Locate
trnL-UAA gene + 47075 47639 565 Locate
trnF-GAA gene + 47933 48005 73 Locate
ndhJ gene − 48673 49149 477 Locate
ndhK gene − 49260 49937 678 Locate
ndhC gene − 49989 50351 363 Locate
trnV-UAC gene − 51308 51963 656 Locate
trnM-CAU gene + 52144 52216 73 Locate
atpE gene − 52417 52818 402 Locate
atpB gene − 52815 54311 1497 Locate
rbcL gene + 55102 56535 1434 Locate
accD gene + 57234 58715 1482 Locate
psaI gene + 59416 59526 111 Locate
ycf4 gene + 59973 60527 555 Locate
cemA gene + 61111 61800 690 Locate
petA gene + 62015 62977 963 Locate
psbJ gene − 64017 64139 123 Locate
psbL gene − 64274 64390 117 Locate
psbF gene − 64414 64533 120 Locate
psbE gene − 64548 64799 252 Locate
petL gene + 65713 65808 96 Locate
petG gene + 65983 66096 114 Locate
trnW-CCA gene − 66219 66292 74 Locate
trnP-UGG gene − 66461 66534 74 Locate
psaJ gene + 66816 66950 135 Locate
rpl33 gene + 67414 67614 201 Locate
rps18 gene + 67781 68086 306 Locate
rpl20 gene − 68322 68708 387 Locate
rps12 gene − 69443 69556 114 Locate
clpP gene − 69675 71594 1920 Locate
psbB gene + 72067 73593 1527 Locate
psbT gene + 73777 73878 102 Locate
psbN gene − 73944 74075 132 Locate
psbH gene + 74181 74399 219 Locate
petB gene + 74525 75891 1367 Locate
petD gene + 76080 77272 1193 Locate
rpoA gene − 77449 78456 1008 Locate
rps11 gene − 78528 78944 417 Locate
rpl36 gene − 79060 79173 114 Locate
infA gene − 79269 79502 234 Locate
rps8 gene − 79630 80034 405 Locate
rpl14 gene − 80217 80585 369 Locate
rpl16 gene − 80719 81979 1261 Locate
rps3 gene − 82123 82785 663 Locate
rpl22 gene − 82770 83243 474 Locate
rps19 gene − 83308 83586 279 Locate
rpl2 gene − 83654 85132 1479 Locate
rpl23 gene − 85151 85432 282 Locate
trnI-CAU gene − 85598 85671 74 Locate
ycf2 gene + 85766 92596 6831 Locate
ycf15 gene + 92786 92935 150 Locate
trnL-CAA gene − 93196 93276 81 Locate
ndhB gene − 93848 96055 2208 Locate
rps7 gene − 96326 96793 468 Locate
rps12 gene − 96847 97639 793 Locate
trnV-GAC gene + 99301 99372 72 Locate
rrn16 gene + 99599 101089 1491 Locate
trnI-GAU gene + 101387 102405 1019 Locate
trnA-UGC gene + 102470 103356 887 Locate
rrn23 gene + 103528 106338 2811 Locate
rrn4.5 gene + 106437 106539 103 Locate
rrn5 gene + 106795 106915 121 Locate
trnR-ACG gene + 107149 107222 74 Locate
trnN-GUU gene − 107789 107860 72 Locate
ycf1 gene + 108202 109332 1131 Locate
ndhF gene − 109226 111457 2232 Locate
rpl32 gene + 111933 112103 171 Locate
trnL-UAG gene + 112868 112947 80 Locate
ccsA gene + 113036 114007 972 Locate
ndhD gene − 114239 115768 1530 Locate
psaC gene − 115859 116104 246 Locate
ndhE gene − 116360 116665 306 Locate
ndhG gene − 116881 117411 531 Locate
ndhI gene − 117771 118277 507 Locate
ndhA gene − 118358 120481 2124 Locate
ndhH gene − 120483 121664 1182 Locate
rps15 gene − 121779 122051 273 Locate
ycf1 gene − 122481 128003 5523 Locate
trnN-GUU gene + 128345 128416 72 Locate
trnR-ACG gene − 128983 129056 74 Locate
rrn5 gene − 129290 129410 121 Locate
rrn4.5 gene − 129666 129768 103 Locate
rrn23 gene − 129867 132677 2811 Locate
trnA-UGC gene − 132849 133735 887 Locate
trnI-GAU gene − 133800 134818 1019 Locate
rrn16 gene − 135116 136606 1491 Locate
trnV-GAC gene − 136833 136904 72 Locate
rps12 gene + 138566 139358 793 Locate
rps7 gene + 139412 139879 468 Locate
ndhB gene + 140150 142357 2208 Locate
trnL-CAA gene + 142929 143009 81 Locate
ycf15 gene − 143270 143419 150 Locate
ycf2 gene − 143609 150439 6831 Locate
trnI-CAU gene + 150534 150607 74 Locate
rpl23 gene + 150773 151054 282 Locate
rpl2 gene + 151073 152551 1479 Locate
Status Available
Accession NC_067655.1
Length 152,661 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources