Isodon forrestii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067659.1 · 11–85 bp · −
psbA · NC_067659.1 · 393–1,451 bp · −
trnK-UUU · NC_067659.1 · 1,683–4,263 bp · −
matK · NC_067659.1 · 2,003–3,523 bp · −
OOC33_pgp086 · NC_067659.1 · 4,790–5,935 bp · −
trnQ-UUG · NC_067659.1 · 6,881–6,952 bp · −
trnS-GCU · NC_067659.1 · 8,185–8,272 bp · −
atpA · NC_067659.1 · 10,159–11,682 bp · −
atpF · NC_067659.1 · 11,793–13,038 bp · −
atpH · NC_067659.1 · 13,330–13,575 bp · −
atpI · NC_067659.1 · 14,576–15,319 bp · −
rps2 · NC_067659.1 · 15,545–16,255 bp · −
rpoC2 · NC_067659.1 · 16,472–20,653 bp · −
rpoC1 · NC_067659.1 · 20,818–23,657 bp · −
rpoB · NC_067659.1 · 23,684–26,896 bp · −
psbM · NC_067659.1 · 29,402–29,506 bp · −
trnD-GUC · NC_067659.1 · 30,025–30,098 bp · −
trnY-GUA · NC_067659.1 · 30,209–30,292 bp · −
trnE-UUC · NC_067659.1 · 30,370–30,442 bp · −
trnS-UGA · NC_067659.1 · 35,108–35,200 bp · −
trnfM-CAU · NC_067659.1 · 36,233–36,306 bp · −
rps14 · NC_067659.1 · 36,452–36,754 bp · −
psaB · NC_067659.1 · 36,877–39,081 bp · −
psaA · NC_067659.1 · 39,107–41,359 bp · −
ycf3 · NC_067659.1 · 42,134–44,080 bp · −
rps4 · NC_067659.1 · 45,326–45,931 bp · −
trnT-UGU · NC_067659.1 · 46,325–46,397 bp · −
ndhJ · NC_067659.1 · 48,661–49,137 bp · −
ndhK · NC_067659.1 · 49,248–49,925 bp · −
ndhC · NC_067659.1 · 49,977–50,339 bp · −
trnV-UAC · NC_067659.1 · 51,304–51,961 bp · −
atpE · NC_067659.1 · 52,415–52,816 bp · −
atpB · NC_067659.1 · 52,813–54,309 bp · −
psbJ · NC_067659.1 · 64,010–64,132 bp · −
psbL · NC_067659.1 · 64,267–64,383 bp · −
psbF · NC_067659.1 · 64,407–64,526 bp · −
psbE · NC_067659.1 · 64,541–64,792 bp · −
trnW-CCA · NC_067659.1 · 66,191–66,264 bp · −
trnP-UGG · NC_067659.1 · 66,434–66,507 bp · −
rpl20 · NC_067659.1 · 68,299–68,685 bp · −
rps12 · NC_067659.1 · 69,417–69,530 bp · −
rps12 · NC_067659.1 · 96,825–97,617 bp · −
clpP · NC_067659.1 · 69,649–71,565 bp · −
psbN · NC_067659.1 · 73,915–74,046 bp · −
rpoA · NC_067659.1 · 77,405–78,427 bp · −
rps11 · NC_067659.1 · 78,499–78,915 bp · −
rpl36 · NC_067659.1 · 79,031–79,144 bp · −
infA · NC_067659.1 · 79,240–79,473 bp · −
rps8 · NC_067659.1 · 79,600–80,004 bp · −
rpl14 · NC_067659.1 · 80,187–80,555 bp · −
rpl16 · NC_067659.1 · 80,690–81,957 bp · −
rps3 · NC_067659.1 · 82,101–82,763 bp · −
rpl22 · NC_067659.1 · 82,748–83,221 bp · −
rps19 · NC_067659.1 · 83,286–83,564 bp · −
rpl2 · NC_067659.1 · 83,632–85,110 bp · −
rpl23 · NC_067659.1 · 85,129–85,410 bp · −
trnI-CAU · NC_067659.1 · 85,576–85,649 bp · −
trnL-CAA · NC_067659.1 · 93,174–93,254 bp · −
ndhB · NC_067659.1 · 93,826–96,033 bp · −
rps7 · NC_067659.1 · 96,304–96,771 bp · −
trnN-GUU · NC_067659.1 · 107,769–107,840 bp · −
ndhF · NC_067659.1 · 109,206–111,437 bp · −
ndhD · NC_067659.1 · 114,218–115,747 bp · −
psaC · NC_067659.1 · 115,838–116,083 bp · −
ndhE · NC_067659.1 · 116,339–116,644 bp · −
ndhG · NC_067659.1 · 116,859–117,389 bp · −
ndhI · NC_067659.1 · 117,751–118,257 bp · −
ndhA · NC_067659.1 · 118,338–120,461 bp · −
ndhH · NC_067659.1 · 120,463–121,644 bp · −
rps15 · NC_067659.1 · 121,759–122,031 bp · −
ycf1 · NC_067659.1 · 122,461–127,983 bp · −
trnR-ACG · NC_067659.1 · 128,963–129,036 bp · −
rrn5 · NC_067659.1 · 129,280–129,400 bp · −
rrn4.5 · NC_067659.1 · 129,656–129,758 bp · −
rrn23 · NC_067659.1 · 129,857–132,667 bp · −
trnA-UGC · NC_067659.1 · 132,839–133,717 bp · −
trnI-GAU · NC_067659.1 · 133,782–134,800 bp · −
rrn16 · NC_067659.1 · 135,098–136,588 bp · −
trnV-GAC · NC_067659.1 · 136,815–136,886 bp · −
ycf15 · NC_067659.1 · 143,252–143,401 bp · −
ycf2 · NC_067659.1 · 143,591–150,421 bp · −
psbK · NC_067659.1 · 7,346–7,531 bp · +
psbI · NC_067659.1 · 7,919–8,029 bp · +
trnG-UCC · NC_067659.1 · 9,034–9,793 bp · +
trnR-UCU · NC_067659.1 · 9,984–10,055 bp · +
trnC-GCA · NC_067659.1 · 28,082–28,152 bp · +
petN · NC_067659.1 · 28,315–28,404 bp · +
trnT-GGU · NC_067659.1 · 31,052–31,123 bp · +
psbD · NC_067659.1 · 32,441–33,502 bp · +
psbC · NC_067659.1 · 33,450–34,871 bp · +
psbZ · NC_067659.1 · 35,541–35,729 bp · +
trnG-GCC · NC_067659.1 · 35,974–36,044 bp · +
trnS-GGA · NC_067659.1 · 44,944–45,030 bp · +
trnL-UAA · NC_067659.1 · 47,084–47,627 bp · +
trnF-GAA · NC_067659.1 · 47,921–47,993 bp · +
trnM-CAU · NC_067659.1 · 52,142–52,214 bp · +
rbcL · NC_067659.1 · 55,100–56,533 bp · +
accD · NC_067659.1 · 57,229–58,710 bp · +
psaI · NC_067659.1 · 59,410–59,520 bp · +
ycf4 · NC_067659.1 · 59,967–60,521 bp · +
cemA · NC_067659.1 · 61,105–61,794 bp · +
petA · NC_067659.1 · 62,009–62,971 bp · +
petL · NC_067659.1 · 65,685–65,780 bp · +
petG · NC_067659.1 · 65,955–66,068 bp · +
psaJ · NC_067659.1 · 66,789–66,923 bp · +
rpl33 · NC_067659.1 · 67,385–67,585 bp · +
rps18 · NC_067659.1 · 67,758–68,063 bp · +
rps12 · NC_067659.1 · 138,548–139,340 bp · +
psbB · NC_067659.1 · 72,038–73,564 bp · +
psbT · NC_067659.1 · 73,748–73,849 bp · +
psbH · NC_067659.1 · 74,152–74,370 bp · +
petB · NC_067659.1 · 74,496–75,862 bp · +
petD · NC_067659.1 · 76,051–77,243 bp · +
ycf2 · NC_067659.1 · 85,744–92,574 bp · +
ycf15 · NC_067659.1 · 92,764–92,913 bp · +
trnV-GAC · NC_067659.1 · 99,279–99,350 bp · +
rrn16 · NC_067659.1 · 99,577–101,067 bp · +
trnI-GAU · NC_067659.1 · 101,365–102,383 bp · +
trnA-UGC · NC_067659.1 · 102,448–103,326 bp · +
rrn23 · NC_067659.1 · 103,498–106,308 bp · +
rrn4.5 · NC_067659.1 · 106,407–106,509 bp · +
rrn5 · NC_067659.1 · 106,765–106,885 bp · +
trnR-ACG · NC_067659.1 · 107,129–107,202 bp · +
ycf1 · NC_067659.1 · 108,182–109,312 bp · +
rpl32 · NC_067659.1 · 111,913–112,083 bp · +
trnL-UAG · NC_067659.1 · 112,847–112,926 bp · +
ccsA · NC_067659.1 · 113,015–114,019 bp · +
trnN-GUU · NC_067659.1 · 128,325–128,396 bp · +
rps7 · NC_067659.1 · 139,394–139,861 bp · +
ndhB · NC_067659.1 · 140,132–142,339 bp · +
trnL-CAA · NC_067659.1 · 142,911–142,991 bp · +
trnI-CAU · NC_067659.1 · 150,516–150,589 bp · +
rpl23 · NC_067659.1 · 150,755–151,036 bp · +
rpl2 · NC_067659.1 · 151,055–152,533 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon forrestii
ANNOTATED PLASTOME
NC_067659.1
152,643 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38161 76322 114482 152643 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK OOC33_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1683 4263 2581 Locate
matK gene − 2003 3523 1521 Locate
OOC33_pgp086 gene − 4790 5935 1146 Locate
trnQ-UUG gene − 6881 6952 72 Locate
psbK gene + 7346 7531 186 Locate
psbI gene + 7919 8029 111 Locate
trnS-GCU gene − 8185 8272 88 Locate
trnG-UCC gene + 9034 9793 760 Locate
trnR-UCU gene + 9984 10055 72 Locate
atpA gene − 10159 11682 1524 Locate
atpF gene − 11793 13038 1246 Locate
atpH gene − 13330 13575 246 Locate
atpI gene − 14576 15319 744 Locate
rps2 gene − 15545 16255 711 Locate
rpoC2 gene − 16472 20653 4182 Locate
rpoC1 gene − 20818 23657 2840 Locate
rpoB gene − 23684 26896 3213 Locate
trnC-GCA gene + 28082 28152 71 Locate
petN gene + 28315 28404 90 Locate
psbM gene − 29402 29506 105 Locate
trnD-GUC gene − 30025 30098 74 Locate
trnY-GUA gene − 30209 30292 84 Locate
trnE-UUC gene − 30370 30442 73 Locate
trnT-GGU gene + 31052 31123 72 Locate
psbD gene + 32441 33502 1062 Locate
psbC gene + 33450 34871 1422 Locate
trnS-UGA gene − 35108 35200 93 Locate
psbZ gene + 35541 35729 189 Locate
trnG-GCC gene + 35974 36044 71 Locate
trnfM-CAU gene − 36233 36306 74 Locate
rps14 gene − 36452 36754 303 Locate
psaB gene − 36877 39081 2205 Locate
psaA gene − 39107 41359 2253 Locate
ycf3 gene − 42134 44080 1947 Locate
trnS-GGA gene + 44944 45030 87 Locate
rps4 gene − 45326 45931 606 Locate
trnT-UGU gene − 46325 46397 73 Locate
trnL-UAA gene + 47084 47627 544 Locate
trnF-GAA gene + 47921 47993 73 Locate
ndhJ gene − 48661 49137 477 Locate
ndhK gene − 49248 49925 678 Locate
ndhC gene − 49977 50339 363 Locate
trnV-UAC gene − 51304 51961 658 Locate
trnM-CAU gene + 52142 52214 73 Locate
atpE gene − 52415 52816 402 Locate
atpB gene − 52813 54309 1497 Locate
rbcL gene + 55100 56533 1434 Locate
accD gene + 57229 58710 1482 Locate
psaI gene + 59410 59520 111 Locate
ycf4 gene + 59967 60521 555 Locate
cemA gene + 61105 61794 690 Locate
petA gene + 62009 62971 963 Locate
psbJ gene − 64010 64132 123 Locate
psbL gene − 64267 64383 117 Locate
psbF gene − 64407 64526 120 Locate
psbE gene − 64541 64792 252 Locate
petL gene + 65685 65780 96 Locate
petG gene + 65955 66068 114 Locate
trnW-CCA gene − 66191 66264 74 Locate
trnP-UGG gene − 66434 66507 74 Locate
psaJ gene + 66789 66923 135 Locate
rpl33 gene + 67385 67585 201 Locate
rps18 gene + 67758 68063 306 Locate
rpl20 gene − 68299 68685 387 Locate
rps12 gene − 69417 69530 114 Locate
clpP gene − 69649 71565 1917 Locate
psbB gene + 72038 73564 1527 Locate
psbT gene + 73748 73849 102 Locate
psbN gene − 73915 74046 132 Locate
psbH gene + 74152 74370 219 Locate
petB gene + 74496 75862 1367 Locate
petD gene + 76051 77243 1193 Locate
rpoA gene − 77405 78427 1023 Locate
rps11 gene − 78499 78915 417 Locate
rpl36 gene − 79031 79144 114 Locate
infA gene − 79240 79473 234 Locate
rps8 gene − 79600 80004 405 Locate
rpl14 gene − 80187 80555 369 Locate
rpl16 gene − 80690 81957 1268 Locate
rps3 gene − 82101 82763 663 Locate
rpl22 gene − 82748 83221 474 Locate
rps19 gene − 83286 83564 279 Locate
rpl2 gene − 83632 85110 1479 Locate
rpl23 gene − 85129 85410 282 Locate
trnI-CAU gene − 85576 85649 74 Locate
ycf2 gene + 85744 92574 6831 Locate
ycf15 gene + 92764 92913 150 Locate
trnL-CAA gene − 93174 93254 81 Locate
ndhB gene − 93826 96033 2208 Locate
rps7 gene − 96304 96771 468 Locate
rps12 gene − 96825 97617 793 Locate
trnV-GAC gene + 99279 99350 72 Locate
rrn16 gene + 99577 101067 1491 Locate
trnI-GAU gene + 101365 102383 1019 Locate
trnA-UGC gene + 102448 103326 879 Locate
rrn23 gene + 103498 106308 2811 Locate
rrn4.5 gene + 106407 106509 103 Locate
rrn5 gene + 106765 106885 121 Locate
trnR-ACG gene + 107129 107202 74 Locate
trnN-GUU gene − 107769 107840 72 Locate
ycf1 gene + 108182 109312 1131 Locate
ndhF gene − 109206 111437 2232 Locate
rpl32 gene + 111913 112083 171 Locate
trnL-UAG gene + 112847 112926 80 Locate
ccsA gene + 113015 114019 1005 Locate
ndhD gene − 114218 115747 1530 Locate
psaC gene − 115838 116083 246 Locate
ndhE gene − 116339 116644 306 Locate
ndhG gene − 116859 117389 531 Locate
ndhI gene − 117751 118257 507 Locate
ndhA gene − 118338 120461 2124 Locate
ndhH gene − 120463 121644 1182 Locate
rps15 gene − 121759 122031 273 Locate
ycf1 gene − 122461 127983 5523 Locate
trnN-GUU gene + 128325 128396 72 Locate
trnR-ACG gene − 128963 129036 74 Locate
rrn5 gene − 129280 129400 121 Locate
rrn4.5 gene − 129656 129758 103 Locate
rrn23 gene − 129857 132667 2811 Locate
trnA-UGC gene − 132839 133717 879 Locate
trnI-GAU gene − 133782 134800 1019 Locate
rrn16 gene − 135098 136588 1491 Locate
trnV-GAC gene − 136815 136886 72 Locate
rps12 gene + 138548 139340 793 Locate
rps7 gene + 139394 139861 468 Locate
ndhB gene + 140132 142339 2208 Locate
trnL-CAA gene + 142911 142991 81 Locate
ycf15 gene − 143252 143401 150 Locate
ycf2 gene − 143591 150421 6831 Locate
trnI-CAU gene + 150516 150589 74 Locate
rpl23 gene + 150755 151036 282 Locate
rpl2 gene + 151055 152533 1479 Locate
Status Available
Accession NC_067659.1
Length 152,643 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources