Isodon gibbosus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067660.1 · 11–85 bp · −
psbA · NC_067660.1 · 393–1,451 bp · −
trnK-UUU · NC_067660.1 · 1,683–4,263 bp · −
matK · NC_067660.1 · 2,003–3,523 bp · −
OOA00_pgp086 · NC_067660.1 · 4,789–5,934 bp · −
trnQ-UUG · NC_067660.1 · 6,872–6,943 bp · −
trnS-GCU · NC_067660.1 · 8,175–8,262 bp · −
atpA · NC_067660.1 · 10,159–11,682 bp · −
atpF · NC_067660.1 · 11,788–13,034 bp · −
atpH · NC_067660.1 · 13,326–13,571 bp · −
atpI · NC_067660.1 · 14,578–15,321 bp · −
rps2 · NC_067660.1 · 15,552–16,262 bp · −
rpoC2 · NC_067660.1 · 16,479–20,660 bp · −
rpoC1 · NC_067660.1 · 20,825–23,658 bp · −
rpoB · NC_067660.1 · 23,685–26,897 bp · −
psbM · NC_067660.1 · 29,396–29,500 bp · −
trnD-GUC · NC_067660.1 · 30,011–30,084 bp · −
trnY-GUA · NC_067660.1 · 30,195–30,278 bp · −
trnE-UUC · NC_067660.1 · 30,356–30,428 bp · −
trnS-UGA · NC_067660.1 · 35,100–35,192 bp · −
trnfM-CAU · NC_067660.1 · 36,224–36,297 bp · −
rps14 · NC_067660.1 · 36,443–36,745 bp · −
psaB · NC_067660.1 · 36,868–39,072 bp · −
psaA · NC_067660.1 · 39,098–41,350 bp · −
ycf3 · NC_067660.1 · 42,126–44,073 bp · −
rps4 · NC_067660.1 · 45,319–45,924 bp · −
trnT-UGU · NC_067660.1 · 46,343–46,415 bp · −
ndhJ · NC_067660.1 · 48,700–49,176 bp · −
ndhK · NC_067660.1 · 49,287–49,964 bp · −
ndhC · NC_067660.1 · 50,016–50,378 bp · −
trnV-UAC · NC_067660.1 · 51,335–51,989 bp · −
atpE · NC_067660.1 · 52,443–52,844 bp · −
atpB · NC_067660.1 · 52,841–54,337 bp · −
psbJ · NC_067660.1 · 64,086–64,208 bp · −
psbL · NC_067660.1 · 64,343–64,459 bp · −
psbF · NC_067660.1 · 64,483–64,602 bp · −
psbE · NC_067660.1 · 64,617–64,868 bp · −
trnW-CCA · NC_067660.1 · 66,267–66,340 bp · −
trnP-UGG · NC_067660.1 · 66,509–66,582 bp · −
rpl20 · NC_067660.1 · 68,387–68,773 bp · −
rps12 · NC_067660.1 · 69,507–69,620 bp · −
rps12 · NC_067660.1 · 96,915–97,707 bp · −
clpP · NC_067660.1 · 69,739–71,655 bp · −
psbN · NC_067660.1 · 74,006–74,137 bp · −
rpoA · NC_067660.1 · 77,511–78,518 bp · −
rps11 · NC_067660.1 · 78,590–79,006 bp · −
rpl36 · NC_067660.1 · 79,122–79,235 bp · −
infA · NC_067660.1 · 79,331–79,564 bp · −
rps8 · NC_067660.1 · 79,691–80,095 bp · −
rpl14 · NC_067660.1 · 80,278–80,646 bp · −
rpl16 · NC_067660.1 · 80,780–82,047 bp · −
rps3 · NC_067660.1 · 82,191–82,853 bp · −
rpl22 · NC_067660.1 · 82,838–83,311 bp · −
rps19 · NC_067660.1 · 83,376–83,654 bp · −
rpl2 · NC_067660.1 · 83,722–85,200 bp · −
rpl23 · NC_067660.1 · 85,219–85,500 bp · −
trnI-CAU · NC_067660.1 · 85,666–85,739 bp · −
trnL-CAA · NC_067660.1 · 93,264–93,344 bp · −
ndhB · NC_067660.1 · 93,916–96,123 bp · −
rps7 · NC_067660.1 · 96,394–96,861 bp · −
trnN-GUU · NC_067660.1 · 107,858–107,929 bp · −
ndhF · NC_067660.1 · 109,295–111,526 bp · −
ndhD · NC_067660.1 · 114,297–115,826 bp · −
psaC · NC_067660.1 · 115,917–116,162 bp · −
ndhE · NC_067660.1 · 116,418–116,723 bp · −
ndhG · NC_067660.1 · 116,938–117,468 bp · −
ndhI · NC_067660.1 · 117,828–118,334 bp · −
ndhA · NC_067660.1 · 118,415–120,539 bp · −
ndhH · NC_067660.1 · 120,541–121,722 bp · −
rps15 · NC_067660.1 · 121,837–122,109 bp · −
ycf1 · NC_067660.1 · 122,539–128,061 bp · −
trnR-ACG · NC_067660.1 · 129,041–129,114 bp · −
rrn5 · NC_067660.1 · 129,358–129,478 bp · −
rrn4.5 · NC_067660.1 · 129,734–129,836 bp · −
rrn23 · NC_067660.1 · 129,935–132,745 bp · −
trnA-UGC · NC_067660.1 · 132,917–133,795 bp · −
trnI-GAU · NC_067660.1 · 133,860–134,878 bp · −
rrn16 · NC_067660.1 · 135,176–136,666 bp · −
trnV-GAC · NC_067660.1 · 136,893–136,964 bp · −
ycf15 · NC_067660.1 · 143,329–143,478 bp · −
ycf2 · NC_067660.1 · 143,668–150,498 bp · −
psbK · NC_067660.1 · 7,337–7,522 bp · +
psbI · NC_067660.1 · 7,910–8,020 bp · +
trnG-UCC · NC_067660.1 · 9,034–9,793 bp · +
trnR-UCU · NC_067660.1 · 9,984–10,055 bp · +
trnC-GCA · NC_067660.1 · 28,081–28,151 bp · +
petN · NC_067660.1 · 28,314–28,403 bp · +
trnT-GGU · NC_067660.1 · 31,044–31,115 bp · +
psbD · NC_067660.1 · 32,433–33,494 bp · +
psbC · NC_067660.1 · 33,442–34,863 bp · +
psbZ · NC_067660.1 · 35,533–35,721 bp · +
trnG-GCC · NC_067660.1 · 35,966–36,036 bp · +
trnS-GGA · NC_067660.1 · 44,936–45,022 bp · +
trnL-UAA · NC_067660.1 · 47,102–47,666 bp · +
trnF-GAA · NC_067660.1 · 47,960–48,032 bp · +
trnM-CAU · NC_067660.1 · 52,170–52,242 bp · +
rbcL · NC_067660.1 · 55,127–56,560 bp · +
accD · NC_067660.1 · 57,265–58,746 bp · +
psaI · NC_067660.1 · 59,446–59,556 bp · +
ycf4 · NC_067660.1 · 60,003–60,557 bp · +
cemA · NC_067660.1 · 61,148–61,837 bp · +
petA · NC_067660.1 · 62,052–63,014 bp · +
petL · NC_067660.1 · 65,761–65,856 bp · +
petG · NC_067660.1 · 66,031–66,144 bp · +
psaJ · NC_067660.1 · 66,864–66,998 bp · +
rpl33 · NC_067660.1 · 67,479–67,679 bp · +
rps18 · NC_067660.1 · 67,846–68,151 bp · +
rps12 · NC_067660.1 · 138,625–139,417 bp · +
psbB · NC_067660.1 · 72,128–73,654 bp · +
psbT · NC_067660.1 · 73,839–73,940 bp · +
psbH · NC_067660.1 · 74,243–74,461 bp · +
petB · NC_067660.1 · 74,587–75,953 bp · +
petD · NC_067660.1 · 76,142–77,334 bp · +
ycf2 · NC_067660.1 · 85,834–92,664 bp · +
ycf15 · NC_067660.1 · 92,854–93,003 bp · +
trnV-GAC · NC_067660.1 · 99,368–99,439 bp · +
rrn16 · NC_067660.1 · 99,666–101,156 bp · +
trnI-GAU · NC_067660.1 · 101,454–102,472 bp · +
trnA-UGC · NC_067660.1 · 102,537–103,415 bp · +
rrn23 · NC_067660.1 · 103,587–106,397 bp · +
rrn4.5 · NC_067660.1 · 106,496–106,598 bp · +
rrn5 · NC_067660.1 · 106,854–106,974 bp · +
trnR-ACG · NC_067660.1 · 107,218–107,291 bp · +
ycf1 · NC_067660.1 · 108,271–109,401 bp · +
rpl32 · NC_067660.1 · 111,995–112,165 bp · +
trnL-UAG · NC_067660.1 · 112,926–113,005 bp · +
ccsA · NC_067660.1 · 113,094–114,065 bp · +
trnN-GUU · NC_067660.1 · 128,403–128,474 bp · +
rps7 · NC_067660.1 · 139,471–139,938 bp · +
ndhB · NC_067660.1 · 140,209–142,416 bp · +
trnL-CAA · NC_067660.1 · 142,988–143,068 bp · +
trnI-CAU · NC_067660.1 · 150,593–150,666 bp · +
rpl23 · NC_067660.1 · 150,832–151,113 bp · +
rpl2 · NC_067660.1 · 151,132–152,610 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon gibbosus
ANNOTATED PLASTOME
NC_067660.1
152,720 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38180 76360 114540 152720 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK OOA00_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1683 4263 2581 Locate
matK gene − 2003 3523 1521 Locate
OOA00_pgp086 gene − 4789 5934 1146 Locate
trnQ-UUG gene − 6872 6943 72 Locate
psbK gene + 7337 7522 186 Locate
psbI gene + 7910 8020 111 Locate
trnS-GCU gene − 8175 8262 88 Locate
trnG-UCC gene + 9034 9793 760 Locate
trnR-UCU gene + 9984 10055 72 Locate
atpA gene − 10159 11682 1524 Locate
atpF gene − 11788 13034 1247 Locate
atpH gene − 13326 13571 246 Locate
atpI gene − 14578 15321 744 Locate
rps2 gene − 15552 16262 711 Locate
rpoC2 gene − 16479 20660 4182 Locate
rpoC1 gene − 20825 23658 2834 Locate
rpoB gene − 23685 26897 3213 Locate
trnC-GCA gene + 28081 28151 71 Locate
petN gene + 28314 28403 90 Locate
psbM gene − 29396 29500 105 Locate
trnD-GUC gene − 30011 30084 74 Locate
trnY-GUA gene − 30195 30278 84 Locate
trnE-UUC gene − 30356 30428 73 Locate
trnT-GGU gene + 31044 31115 72 Locate
psbD gene + 32433 33494 1062 Locate
psbC gene + 33442 34863 1422 Locate
trnS-UGA gene − 35100 35192 93 Locate
psbZ gene + 35533 35721 189 Locate
trnG-GCC gene + 35966 36036 71 Locate
trnfM-CAU gene − 36224 36297 74 Locate
rps14 gene − 36443 36745 303 Locate
psaB gene − 36868 39072 2205 Locate
psaA gene − 39098 41350 2253 Locate
ycf3 gene − 42126 44073 1948 Locate
trnS-GGA gene + 44936 45022 87 Locate
rps4 gene − 45319 45924 606 Locate
trnT-UGU gene − 46343 46415 73 Locate
trnL-UAA gene + 47102 47666 565 Locate
trnF-GAA gene + 47960 48032 73 Locate
ndhJ gene − 48700 49176 477 Locate
ndhK gene − 49287 49964 678 Locate
ndhC gene − 50016 50378 363 Locate
trnV-UAC gene − 51335 51989 655 Locate
trnM-CAU gene + 52170 52242 73 Locate
atpE gene − 52443 52844 402 Locate
atpB gene − 52841 54337 1497 Locate
rbcL gene + 55127 56560 1434 Locate
accD gene + 57265 58746 1482 Locate
psaI gene + 59446 59556 111 Locate
ycf4 gene + 60003 60557 555 Locate
cemA gene + 61148 61837 690 Locate
petA gene + 62052 63014 963 Locate
psbJ gene − 64086 64208 123 Locate
psbL gene − 64343 64459 117 Locate
psbF gene − 64483 64602 120 Locate
psbE gene − 64617 64868 252 Locate
petL gene + 65761 65856 96 Locate
petG gene + 66031 66144 114 Locate
trnW-CCA gene − 66267 66340 74 Locate
trnP-UGG gene − 66509 66582 74 Locate
psaJ gene + 66864 66998 135 Locate
rpl33 gene + 67479 67679 201 Locate
rps18 gene + 67846 68151 306 Locate
rpl20 gene − 68387 68773 387 Locate
rps12 gene − 69507 69620 114 Locate
clpP gene − 69739 71655 1917 Locate
psbB gene + 72128 73654 1527 Locate
psbT gene + 73839 73940 102 Locate
psbN gene − 74006 74137 132 Locate
psbH gene + 74243 74461 219 Locate
petB gene + 74587 75953 1367 Locate
petD gene + 76142 77334 1193 Locate
rpoA gene − 77511 78518 1008 Locate
rps11 gene − 78590 79006 417 Locate
rpl36 gene − 79122 79235 114 Locate
infA gene − 79331 79564 234 Locate
rps8 gene − 79691 80095 405 Locate
rpl14 gene − 80278 80646 369 Locate
rpl16 gene − 80780 82047 1268 Locate
rps3 gene − 82191 82853 663 Locate
rpl22 gene − 82838 83311 474 Locate
rps19 gene − 83376 83654 279 Locate
rpl2 gene − 83722 85200 1479 Locate
rpl23 gene − 85219 85500 282 Locate
trnI-CAU gene − 85666 85739 74 Locate
ycf2 gene + 85834 92664 6831 Locate
ycf15 gene + 92854 93003 150 Locate
trnL-CAA gene − 93264 93344 81 Locate
ndhB gene − 93916 96123 2208 Locate
rps7 gene − 96394 96861 468 Locate
rps12 gene − 96915 97707 793 Locate
trnV-GAC gene + 99368 99439 72 Locate
rrn16 gene + 99666 101156 1491 Locate
trnI-GAU gene + 101454 102472 1019 Locate
trnA-UGC gene + 102537 103415 879 Locate
rrn23 gene + 103587 106397 2811 Locate
rrn4.5 gene + 106496 106598 103 Locate
rrn5 gene + 106854 106974 121 Locate
trnR-ACG gene + 107218 107291 74 Locate
trnN-GUU gene − 107858 107929 72 Locate
ycf1 gene + 108271 109401 1131 Locate
ndhF gene − 109295 111526 2232 Locate
rpl32 gene + 111995 112165 171 Locate
trnL-UAG gene + 112926 113005 80 Locate
ccsA gene + 113094 114065 972 Locate
ndhD gene − 114297 115826 1530 Locate
psaC gene − 115917 116162 246 Locate
ndhE gene − 116418 116723 306 Locate
ndhG gene − 116938 117468 531 Locate
ndhI gene − 117828 118334 507 Locate
ndhA gene − 118415 120539 2125 Locate
ndhH gene − 120541 121722 1182 Locate
rps15 gene − 121837 122109 273 Locate
ycf1 gene − 122539 128061 5523 Locate
trnN-GUU gene + 128403 128474 72 Locate
trnR-ACG gene − 129041 129114 74 Locate
rrn5 gene − 129358 129478 121 Locate
rrn4.5 gene − 129734 129836 103 Locate
rrn23 gene − 129935 132745 2811 Locate
trnA-UGC gene − 132917 133795 879 Locate
trnI-GAU gene − 133860 134878 1019 Locate
rrn16 gene − 135176 136666 1491 Locate
trnV-GAC gene − 136893 136964 72 Locate
rps12 gene + 138625 139417 793 Locate
rps7 gene + 139471 139938 468 Locate
ndhB gene + 140209 142416 2208 Locate
trnL-CAA gene + 142988 143068 81 Locate
ycf15 gene − 143329 143478 150 Locate
ycf2 gene − 143668 150498 6831 Locate
trnI-CAU gene + 150593 150666 74 Locate
rpl23 gene + 150832 151113 282 Locate
rpl2 gene + 151132 152610 1479 Locate
Status Available
Accession NC_067660.1
Length 152,720 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources