Isodon interruptus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067662.1 · 11–85 bp · −
psbA · NC_067662.1 · 393–1,451 bp · −
trnK-UUU · NC_067662.1 · 1,683–4,263 bp · −
matK · NC_067662.1 · 2,003–3,523 bp · −
ON975_pgp086 · NC_067662.1 · 4,789–5,954 bp · −
trnQ-UUG · NC_067662.1 · 6,900–6,971 bp · −
trnS-GCU · NC_067662.1 · 8,205–8,292 bp · −
atpA · NC_067662.1 · 10,180–11,703 bp · −
atpF · NC_067662.1 · 11,812–13,057 bp · −
atpH · NC_067662.1 · 13,349–13,594 bp · −
atpI · NC_067662.1 · 14,595–15,338 bp · −
rps2 · NC_067662.1 · 15,564–16,274 bp · −
rpoC2 · NC_067662.1 · 16,492–20,673 bp · −
rpoC1 · NC_067662.1 · 20,838–23,672 bp · −
rpoB · NC_067662.1 · 23,699–26,911 bp · −
psbM · NC_067662.1 · 29,411–29,515 bp · −
trnD-GUC · NC_067662.1 · 30,034–30,107 bp · −
trnY-GUA · NC_067662.1 · 30,218–30,301 bp · −
trnE-UUC · NC_067662.1 · 30,384–30,456 bp · −
trnS-UGA · NC_067662.1 · 35,122–35,214 bp · −
trnfM-CAU · NC_067662.1 · 36,247–36,320 bp · −
rps14 · NC_067662.1 · 36,466–36,768 bp · −
psaB · NC_067662.1 · 36,891–39,095 bp · −
psaA · NC_067662.1 · 39,121–41,373 bp · −
ycf3 · NC_067662.1 · 42,148–44,094 bp · −
rps4 · NC_067662.1 · 45,341–45,946 bp · −
trnT-UGU · NC_067662.1 · 46,342–46,414 bp · −
ndhJ · NC_067662.1 · 48,698–49,174 bp · −
ndhK · NC_067662.1 · 49,285–49,962 bp · −
ndhC · NC_067662.1 · 50,014–50,376 bp · −
trnV-UAC · NC_067662.1 · 51,333–51,988 bp · −
atpE · NC_067662.1 · 52,442–52,843 bp · −
atpB · NC_067662.1 · 52,840–54,336 bp · −
psbJ · NC_067662.1 · 64,024–64,146 bp · −
psbL · NC_067662.1 · 64,281–64,397 bp · −
psbF · NC_067662.1 · 64,421–64,540 bp · −
psbE · NC_067662.1 · 64,555–64,806 bp · −
trnW-CCA · NC_067662.1 · 66,205–66,278 bp · −
trnP-UGG · NC_067662.1 · 66,447–66,520 bp · −
rpl20 · NC_067662.1 · 68,306–68,692 bp · −
rps12 · NC_067662.1 · 69,425–69,538 bp · −
rps12 · NC_067662.1 · 96,833–97,625 bp · −
clpP · NC_067662.1 · 69,657–71,574 bp · −
psbN · NC_067662.1 · 73,923–74,054 bp · −
rpoA · NC_067662.1 · 77,428–78,435 bp · −
rps11 · NC_067662.1 · 78,507–78,923 bp · −
rpl36 · NC_067662.1 · 79,039–79,152 bp · −
infA · NC_067662.1 · 79,248–79,481 bp · −
rps8 · NC_067662.1 · 79,608–80,012 bp · −
rpl14 · NC_067662.1 · 80,195–80,563 bp · −
rpl16 · NC_067662.1 · 80,697–81,965 bp · −
rps3 · NC_067662.1 · 82,109–82,771 bp · −
rpl22 · NC_067662.1 · 82,756–83,229 bp · −
rps19 · NC_067662.1 · 83,294–83,572 bp · −
rpl2 · NC_067662.1 · 83,640–85,118 bp · −
rpl23 · NC_067662.1 · 85,137–85,418 bp · −
trnI-CAU · NC_067662.1 · 85,584–85,657 bp · −
trnL-CAA · NC_067662.1 · 93,182–93,262 bp · −
ndhB · NC_067662.1 · 93,834–96,041 bp · −
rps7 · NC_067662.1 · 96,312–96,779 bp · −
trnN-GUU · NC_067662.1 · 107,777–107,848 bp · −
ndhF · NC_067662.1 · 109,214–111,445 bp · −
ndhD · NC_067662.1 · 114,227–115,756 bp · −
psaC · NC_067662.1 · 115,847–116,092 bp · −
ndhE · NC_067662.1 · 116,348–116,653 bp · −
ndhG · NC_067662.1 · 116,869–117,399 bp · −
ndhI · NC_067662.1 · 117,760–118,266 bp · −
ndhA · NC_067662.1 · 118,347–120,470 bp · −
ndhH · NC_067662.1 · 120,472–121,653 bp · −
rps15 · NC_067662.1 · 121,768–122,040 bp · −
ycf1 · NC_067662.1 · 122,470–127,992 bp · −
trnR-ACG · NC_067662.1 · 128,972–129,045 bp · −
rrn5 · NC_067662.1 · 129,289–129,409 bp · −
rrn4.5 · NC_067662.1 · 129,665–129,767 bp · −
rrn23 · NC_067662.1 · 129,866–132,676 bp · −
trnA-UGC · NC_067662.1 · 132,848–133,726 bp · −
trnI-GAU · NC_067662.1 · 133,791–134,809 bp · −
rrn16 · NC_067662.1 · 135,107–136,597 bp · −
trnV-GAC · NC_067662.1 · 136,824–136,895 bp · −
ycf15 · NC_067662.1 · 143,261–143,410 bp · −
ycf2 · NC_067662.1 · 143,600–150,430 bp · −
psbK · NC_067662.1 · 7,365–7,550 bp · +
psbI · NC_067662.1 · 7,938–8,048 bp · +
trnG-UCC · NC_067662.1 · 9,055–9,814 bp · +
trnR-UCU · NC_067662.1 · 10,005–10,076 bp · +
trnC-GCA · NC_067662.1 · 28,097–28,167 bp · +
petN · NC_067662.1 · 28,330–28,419 bp · +
trnT-GGU · NC_067662.1 · 31,066–31,137 bp · +
psbD · NC_067662.1 · 32,456–33,517 bp · +
psbC · NC_067662.1 · 33,465–34,886 bp · +
psbZ · NC_067662.1 · 35,555–35,743 bp · +
trnG-GCC · NC_067662.1 · 35,988–36,058 bp · +
trnS-GGA · NC_067662.1 · 44,958–45,044 bp · +
trnL-UAA · NC_067662.1 · 47,100–47,664 bp · +
trnF-GAA · NC_067662.1 · 47,958–48,030 bp · +
trnM-CAU · NC_067662.1 · 52,169–52,241 bp · +
rbcL · NC_067662.1 · 55,129–56,562 bp · +
accD · NC_067662.1 · 57,245–58,726 bp · +
psaI · NC_067662.1 · 59,427–59,537 bp · +
ycf4 · NC_067662.1 · 59,981–60,535 bp · +
cemA · NC_067662.1 · 61,119–61,808 bp · +
petA · NC_067662.1 · 62,023–62,985 bp · +
petL · NC_067662.1 · 65,699–65,794 bp · +
petG · NC_067662.1 · 65,969–66,082 bp · +
psaJ · NC_067662.1 · 66,802–66,936 bp · +
rpl33 · NC_067662.1 · 67,397–67,597 bp · +
rps18 · NC_067662.1 · 67,764–68,069 bp · +
rps12 · NC_067662.1 · 138,557–139,349 bp · +
psbB · NC_067662.1 · 72,047–73,573 bp · +
psbT · NC_067662.1 · 73,756–73,857 bp · +
psbH · NC_067662.1 · 74,160–74,378 bp · +
petB · NC_067662.1 · 74,504–75,870 bp · +
petD · NC_067662.1 · 76,059–77,251 bp · +
ycf2 · NC_067662.1 · 85,752–92,582 bp · +
ycf15 · NC_067662.1 · 92,772–92,921 bp · +
trnV-GAC · NC_067662.1 · 99,287–99,358 bp · +
rrn16 · NC_067662.1 · 99,585–101,075 bp · +
trnI-GAU · NC_067662.1 · 101,373–102,391 bp · +
trnA-UGC · NC_067662.1 · 102,456–103,334 bp · +
rrn23 · NC_067662.1 · 103,506–106,316 bp · +
rrn4.5 · NC_067662.1 · 106,415–106,517 bp · +
rrn5 · NC_067662.1 · 106,773–106,893 bp · +
trnR-ACG · NC_067662.1 · 107,137–107,210 bp · +
ycf1 · NC_067662.1 · 108,190–109,320 bp · +
rpl32 · NC_067662.1 · 111,921–112,091 bp · +
trnL-UAG · NC_067662.1 · 112,856–112,935 bp · +
ccsA · NC_067662.1 · 113,024–113,995 bp · +
trnN-GUU · NC_067662.1 · 128,334–128,405 bp · +
rps7 · NC_067662.1 · 139,403–139,870 bp · +
ndhB · NC_067662.1 · 140,141–142,348 bp · +
trnL-CAA · NC_067662.1 · 142,920–143,000 bp · +
trnI-CAU · NC_067662.1 · 150,525–150,598 bp · +
rpl23 · NC_067662.1 · 150,764–151,045 bp · +
rpl2 · NC_067662.1 · 151,064–152,542 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon interruptus
ANNOTATED PLASTOME
NC_067662.1
152,652 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38163 76326 114489 152652 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK ON975_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1683 4263 2581 Locate
matK gene − 2003 3523 1521 Locate
ON975_pgp086 gene − 4789 5954 1166 Locate
trnQ-UUG gene − 6900 6971 72 Locate
psbK gene + 7365 7550 186 Locate
psbI gene + 7938 8048 111 Locate
trnS-GCU gene − 8205 8292 88 Locate
trnG-UCC gene + 9055 9814 760 Locate
trnR-UCU gene + 10005 10076 72 Locate
atpA gene − 10180 11703 1524 Locate
atpF gene − 11812 13057 1246 Locate
atpH gene − 13349 13594 246 Locate
atpI gene − 14595 15338 744 Locate
rps2 gene − 15564 16274 711 Locate
rpoC2 gene − 16492 20673 4182 Locate
rpoC1 gene − 20838 23672 2835 Locate
rpoB gene − 23699 26911 3213 Locate
trnC-GCA gene + 28097 28167 71 Locate
petN gene + 28330 28419 90 Locate
psbM gene − 29411 29515 105 Locate
trnD-GUC gene − 30034 30107 74 Locate
trnY-GUA gene − 30218 30301 84 Locate
trnE-UUC gene − 30384 30456 73 Locate
trnT-GGU gene + 31066 31137 72 Locate
psbD gene + 32456 33517 1062 Locate
psbC gene + 33465 34886 1422 Locate
trnS-UGA gene − 35122 35214 93 Locate
psbZ gene + 35555 35743 189 Locate
trnG-GCC gene + 35988 36058 71 Locate
trnfM-CAU gene − 36247 36320 74 Locate
rps14 gene − 36466 36768 303 Locate
psaB gene − 36891 39095 2205 Locate
psaA gene − 39121 41373 2253 Locate
ycf3 gene − 42148 44094 1947 Locate
trnS-GGA gene + 44958 45044 87 Locate
rps4 gene − 45341 45946 606 Locate
trnT-UGU gene − 46342 46414 73 Locate
trnL-UAA gene + 47100 47664 565 Locate
trnF-GAA gene + 47958 48030 73 Locate
ndhJ gene − 48698 49174 477 Locate
ndhK gene − 49285 49962 678 Locate
ndhC gene − 50014 50376 363 Locate
trnV-UAC gene − 51333 51988 656 Locate
trnM-CAU gene + 52169 52241 73 Locate
atpE gene − 52442 52843 402 Locate
atpB gene − 52840 54336 1497 Locate
rbcL gene + 55129 56562 1434 Locate
accD gene + 57245 58726 1482 Locate
psaI gene + 59427 59537 111 Locate
ycf4 gene + 59981 60535 555 Locate
cemA gene + 61119 61808 690 Locate
petA gene + 62023 62985 963 Locate
psbJ gene − 64024 64146 123 Locate
psbL gene − 64281 64397 117 Locate
psbF gene − 64421 64540 120 Locate
psbE gene − 64555 64806 252 Locate
petL gene + 65699 65794 96 Locate
petG gene + 65969 66082 114 Locate
trnW-CCA gene − 66205 66278 74 Locate
trnP-UGG gene − 66447 66520 74 Locate
psaJ gene + 66802 66936 135 Locate
rpl33 gene + 67397 67597 201 Locate
rps18 gene + 67764 68069 306 Locate
rpl20 gene − 68306 68692 387 Locate
rps12 gene − 69425 69538 114 Locate
clpP gene − 69657 71574 1918 Locate
psbB gene + 72047 73573 1527 Locate
psbT gene + 73756 73857 102 Locate
psbN gene − 73923 74054 132 Locate
psbH gene + 74160 74378 219 Locate
petB gene + 74504 75870 1367 Locate
petD gene + 76059 77251 1193 Locate
rpoA gene − 77428 78435 1008 Locate
rps11 gene − 78507 78923 417 Locate
rpl36 gene − 79039 79152 114 Locate
infA gene − 79248 79481 234 Locate
rps8 gene − 79608 80012 405 Locate
rpl14 gene − 80195 80563 369 Locate
rpl16 gene − 80697 81965 1269 Locate
rps3 gene − 82109 82771 663 Locate
rpl22 gene − 82756 83229 474 Locate
rps19 gene − 83294 83572 279 Locate
rpl2 gene − 83640 85118 1479 Locate
rpl23 gene − 85137 85418 282 Locate
trnI-CAU gene − 85584 85657 74 Locate
ycf2 gene + 85752 92582 6831 Locate
ycf15 gene + 92772 92921 150 Locate
trnL-CAA gene − 93182 93262 81 Locate
ndhB gene − 93834 96041 2208 Locate
rps7 gene − 96312 96779 468 Locate
rps12 gene − 96833 97625 793 Locate
trnV-GAC gene + 99287 99358 72 Locate
rrn16 gene + 99585 101075 1491 Locate
trnI-GAU gene + 101373 102391 1019 Locate
trnA-UGC gene + 102456 103334 879 Locate
rrn23 gene + 103506 106316 2811 Locate
rrn4.5 gene + 106415 106517 103 Locate
rrn5 gene + 106773 106893 121 Locate
trnR-ACG gene + 107137 107210 74 Locate
trnN-GUU gene − 107777 107848 72 Locate
ycf1 gene + 108190 109320 1131 Locate
ndhF gene − 109214 111445 2232 Locate
rpl32 gene + 111921 112091 171 Locate
trnL-UAG gene + 112856 112935 80 Locate
ccsA gene + 113024 113995 972 Locate
ndhD gene − 114227 115756 1530 Locate
psaC gene − 115847 116092 246 Locate
ndhE gene − 116348 116653 306 Locate
ndhG gene − 116869 117399 531 Locate
ndhI gene − 117760 118266 507 Locate
ndhA gene − 118347 120470 2124 Locate
ndhH gene − 120472 121653 1182 Locate
rps15 gene − 121768 122040 273 Locate
ycf1 gene − 122470 127992 5523 Locate
trnN-GUU gene + 128334 128405 72 Locate
trnR-ACG gene − 128972 129045 74 Locate
rrn5 gene − 129289 129409 121 Locate
rrn4.5 gene − 129665 129767 103 Locate
rrn23 gene − 129866 132676 2811 Locate
trnA-UGC gene − 132848 133726 879 Locate
trnI-GAU gene − 133791 134809 1019 Locate
rrn16 gene − 135107 136597 1491 Locate
trnV-GAC gene − 136824 136895 72 Locate
rps12 gene + 138557 139349 793 Locate
rps7 gene + 139403 139870 468 Locate
ndhB gene + 140141 142348 2208 Locate
trnL-CAA gene + 142920 143000 81 Locate
ycf15 gene − 143261 143410 150 Locate
ycf2 gene − 143600 150430 6831 Locate
trnI-CAU gene + 150525 150598 74 Locate
rpl23 gene + 150764 151045 282 Locate
rpl2 gene + 151064 152542 1479 Locate
Status Available
Accession NC_067662.1
Length 152,652 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources