Coordinate-aware organelle record

Isodon japonicus var. glaucocalyx chloroplast genome

Available ON858864.1 152,660 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	392	1451	1059
trnK-UUU	gene	translation-rna	−	1682	4263	2581
matK	gene	other	−	2002	3523	1521
trnQ-UUG	gene	translation-rna	−	6877	6949	72
psbK	gene	photosystem-ii	+	7342	7528	186
psbI	gene	photosystem-ii	+	7915	8026	111
trnS-GCU	gene	translation-rna	−	8181	8269	88
trnG-UCC	gene	translation-rna	+	9030	9790	760
trnR-UCU	gene	translation-rna	+	9980	10052	72
atpA	gene	atp-synthase	−	10155	11679	1524
atpF	gene	atp-synthase	−	11784	13030	1246
atpH	gene	atp-synthase	−	13321	13567	246
atpI	gene	atp-synthase	−	14568	15312	744
rps2	gene	ribosomal-protein	−	15537	16248	711
rpoC2	gene	rna-polymerase	−	16464	20646	4182
rpoC1	gene	rna-polymerase	−	20810	23649	2839
rpoB	gene	rna-polymerase	−	23675	26888	3213
trnC-GCA	gene	translation-rna	+	28077	28148	71
petN	gene	cytochrome	+	28310	28400	90
psbM	gene	photosystem-ii	−	29392	29497	105
trnD-GUC	gene	translation-rna	−	30015	30089	74
trnY-GUA	gene	translation-rna	−	30199	30283	84
trnE-UUC	gene	translation-rna	−	30360	30433	73
trnT-GGU	gene	translation-rna	+	31042	31114	72
psbD	gene	photosystem-ii	+	32431	33493	1062
psbC	gene	photosystem-ii	+	33440	34862	1422
trnS-UGA	gene	translation-rna	−	35097	35190	93
psbZ	gene	photosystem-ii	+	35530	35719	189
trnG-GCC	gene	translation-rna	+	35963	36034	71
trnfM-CAU	gene	translation-rna	−	36224	36298	74
rps14	gene	ribosomal-protein	−	36443	36746	303
psaB	gene	photosystem-i	−	36868	39073	2205
psaA	gene	photosystem-i	−	39098	41351	2253
ycf3	gene	other	−	42118	44066	1948
trnS-GGA	gene	translation-rna	+	44929	45016	87
rps4	gene	ribosomal-protein	−	45312	45918	606
trnT-UGU	gene	translation-rna	−	46333	46406	73
trnL-UAA	gene	translation-rna	+	47092	47657	565
trnF-GAA	gene	translation-rna	+	47950	48023	73
ndhJ	gene	nad-dehydrogenase	−	48690	49167	477
ndhK	gene	nad-dehydrogenase	−	49277	49955	678
ndhC	gene	nad-dehydrogenase	−	50006	50369	363
trnV-UAC	gene	translation-rna	−	51331	51987	656
trnM-CAU	gene	translation-rna	+	52167	52240	73
atpE	gene	atp-synthase	−	52440	52842	402
atpB	gene	atp-synthase	−	52838	54335	1497
rbcL	gene	other	+	55126	56560	1434
accD	gene	other	+	57264	58746	1482
psaI	gene	photosystem-i	+	59445	59556	111
ycf4	gene	other	+	60002	60557	555
cemA	gene	other	+	61147	61837	690
petA	gene	cytochrome	+	62058	63021	963
psbJ	gene	photosystem-ii	−	64059	64182	123
psbL	gene	photosystem-ii	−	64316	64433	117
psbF	gene	photosystem-ii	−	64456	64576	120
psbE	gene	photosystem-ii	−	64590	64842	252
petL	gene	cytochrome	+	65734	65830	96
petG	gene	cytochrome	+	66004	66118	114
trnW-CCA	gene	translation-rna	−	66240	66314	74
trnP-UGG	gene	translation-rna	−	66482	66556	74
psaJ	gene	photosystem-i	+	66837	66972	135
rpl33	gene	ribosomal-protein	+	67433	67634	201
rps18	gene	ribosomal-protein	+	67800	68106	306
rpl20	gene	ribosomal-protein	−	68340	68727	387
rps12	gene	ribosomal-protein	−	69458	97657	28199
rps12	gene	ribosomal-protein	+	69458	139357	69899
clpP	gene	other	−	69690	71605	1915
psbB	gene	photosystem-ii	+	72077	73604	1527
psbT	gene	photosystem-ii	+	73787	73889	102
psbN	gene	photosystem-ii	−	73954	74086	132
psbH	gene	photosystem-ii	+	74191	74410	219
petB	gene	cytochrome	+	74535	75902	1367
petD	gene	cytochrome	+	76090	77283	1193
rpoA	gene	rna-polymerase	−	77459	78467	1008
rps11	gene	ribosomal-protein	−	78538	78955	417
rpl36	gene	ribosomal-protein	−	79070	79184	114
infA	gene	other	−	79279	79513	234
rps8	gene	ribosomal-protein	−	79639	80044	405
rpl14	gene	ribosomal-protein	−	80226	80595	369
rpl16	gene	ribosomal-protein	−	80728	81997	1269
rps3	gene	ribosomal-protein	−	82140	82803	663
rpl22	gene	ribosomal-protein	−	82787	83261	474
rps19	gene	ribosomal-protein	−	83325	83604	279
rpl2	gene	ribosomal-protein	−	83671	85150	1479
rpl23	gene	ribosomal-protein	−	85168	85450	282
trnI-CAU	gene	translation-rna	−	85615	85689	74
ycf2	gene	other	+	85783	92614	6831
ycf15	gene	other	+	92803	92953	150
trnL-CAA	gene	translation-rna	−	93213	93294	81
ndhB	gene	nad-dehydrogenase	−	93865	96073	2208
rps7	gene	ribosomal-protein	−	96343	96811	468
trnV-GAC	gene	translation-rna	+	99318	99390	72
rrn16	gene	ribosomal-rna	+	99616	101107	1491
trnI-GAU	gene	translation-rna	+	101404	102423	1019
trnA-UGC	gene	translation-rna	+	102487	103366	879
rrn23	gene	ribosomal-rna	+	103537	106348	2811
rrn4.5	gene	ribosomal-rna	+	106446	106549	103
rrn5	gene	ribosomal-rna	+	106804	106925	121
trnR-ACG	gene	translation-rna	+	107168	107242	74
trnN-GUU	gene	translation-rna	−	107804	107876	72
ycf1	gene	other	+	108217	109348	1131
ndhF	gene	nad-dehydrogenase	−	109241	111473	2232
rpl32	gene	ribosomal-protein	+	111941	112112	171
trnL-UAG	gene	translation-rna	+	112870	112950	80
ccsA	gene	other	+	113038	114010	972
ndhD	gene	nad-dehydrogenase	−	114242	115772	1530
psaC	gene	photosystem-i	−	115862	116108	246
ndhE	gene	nad-dehydrogenase	−	116363	116669	306
ndhG	gene	nad-dehydrogenase	−	116883	117414	531
ndhI	gene	nad-dehydrogenase	−	117772	118279	507
ndhA	gene	nad-dehydrogenase	−	118359	120482	2123
ndhH	gene	nad-dehydrogenase	−	120483	121665	1182
rps15	gene	ribosomal-protein	−	121779	122052	273
ycf1	gene	other	−	122481	128004	5523
trnN-GUU	gene	translation-rna	+	128345	128417	72
trnR-ACG	gene	translation-rna	−	128979	129053	74
rrn5	gene	ribosomal-rna	−	129296	129417	121
rrn4.5	gene	ribosomal-rna	−	129672	129775	103
rrn23	gene	ribosomal-rna	−	129873	132684	2811
trnA-UGC	gene	translation-rna	−	132855	133734	879
trnI-GAU	gene	translation-rna	−	133798	134817	1019
rrn16	gene	ribosomal-rna	−	135114	136605	1491
trnV-GAC	gene	translation-rna	−	136831	136903	72
rps7	gene	ribosomal-protein	+	139410	139878	468
ndhB	gene	nad-dehydrogenase	+	140148	142356	2208
trnL-CAA	gene	translation-rna	+	142927	143008	81
ycf15	gene	other	−	143268	143418	150
ycf2	gene	other	−	143607	150438	6831
trnI-CAU	gene	translation-rna	+	150532	150606	74
rpl23	gene	ribosomal-protein	+	150771	151053	282
rpl2	gene	ribosomal-protein	+	151071	152550	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeON858864.1DNA · accDON858864DNA · atpBON858864DNA · matKON858864DNA · ndhFON858864DNA · psbAON858864DNA · rbcLON858864DNA · rps12ON858864DNA · ycf1ON858864