Isodon leucophyllus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067665.1 · 11–85 bp · −
psbA · NC_067665.1 · 394–1,452 bp · −
trnK-UUU · NC_067665.1 · 1,684–4,265 bp · −
matK · NC_067665.1 · 2,005–3,525 bp · −
OOC31_pgp086 · NC_067665.1 · 4,792–5,937 bp · −
trnQ-UUG · NC_067665.1 · 6,889–6,960 bp · −
trnS-GCU · NC_067665.1 · 8,194–8,281 bp · −
atpA · NC_067665.1 · 10,167–11,690 bp · −
atpF · NC_067665.1 · 11,797–13,042 bp · −
atpH · NC_067665.1 · 13,334–13,579 bp · −
atpI · NC_067665.1 · 14,580–15,323 bp · −
rps2 · NC_067665.1 · 15,549–16,259 bp · −
rpoC2 · NC_067665.1 · 16,475–20,656 bp · −
rpoC1 · NC_067665.1 · 20,821–23,655 bp · −
rpoB · NC_067665.1 · 23,682–26,894 bp · −
psbM · NC_067665.1 · 29,405–29,509 bp · −
trnD-GUC · NC_067665.1 · 30,028–30,101 bp · −
trnY-GUA · NC_067665.1 · 30,212–30,295 bp · −
trnE-UUC · NC_067665.1 · 30,373–30,445 bp · −
trnS-UGA · NC_067665.1 · 35,111–35,203 bp · −
trnfM-CAU · NC_067665.1 · 36,234–36,307 bp · −
rps14 · NC_067665.1 · 36,453–36,755 bp · −
psaB · NC_067665.1 · 36,878–39,082 bp · −
psaA · NC_067665.1 · 39,108–41,360 bp · −
ycf3 · NC_067665.1 · 42,133–44,079 bp · −
rps4 · NC_067665.1 · 45,327–45,932 bp · −
trnT-UGU · NC_067665.1 · 46,361–46,433 bp · −
ndhJ · NC_067665.1 · 48,712–49,188 bp · −
ndhK · NC_067665.1 · 49,299–49,976 bp · −
ndhC · NC_067665.1 · 50,028–50,390 bp · −
trnV-UAC · NC_067665.1 · 51,348–52,003 bp · −
atpE · NC_067665.1 · 52,457–52,858 bp · −
atpB · NC_067665.1 · 52,855–54,351 bp · −
psbJ · NC_067665.1 · 64,066–64,188 bp · −
psbL · NC_067665.1 · 64,323–64,439 bp · −
psbF · NC_067665.1 · 64,463–64,582 bp · −
psbE · NC_067665.1 · 64,597–64,848 bp · −
trnW-CCA · NC_067665.1 · 66,247–66,320 bp · −
trnP-UGG · NC_067665.1 · 66,489–66,562 bp · −
rpl20 · NC_067665.1 · 68,349–68,735 bp · −
rps12 · NC_067665.1 · 69,469–69,582 bp · −
rps12 · NC_067665.1 · 96,875–97,667 bp · −
clpP · NC_067665.1 · 69,701–71,616 bp · −
psbN · NC_067665.1 · 73,967–74,098 bp · −
rpoA · NC_067665.1 · 77,471–78,478 bp · −
rps11 · NC_067665.1 · 78,550–78,966 bp · −
rpl36 · NC_067665.1 · 79,082–79,195 bp · −
infA · NC_067665.1 · 79,291–79,524 bp · −
rps8 · NC_067665.1 · 79,651–80,055 bp · −
rpl14 · NC_067665.1 · 80,238–80,606 bp · −
rpl16 · NC_067665.1 · 80,740–82,007 bp · −
rps3 · NC_067665.1 · 82,151–82,813 bp · −
rpl22 · NC_067665.1 · 82,798–83,271 bp · −
rps19 · NC_067665.1 · 83,336–83,614 bp · −
rpl2 · NC_067665.1 · 83,682–85,160 bp · −
rpl23 · NC_067665.1 · 85,179–85,460 bp · −
trnI-CAU · NC_067665.1 · 85,626–85,699 bp · −
trnL-CAA · NC_067665.1 · 93,224–93,304 bp · −
ndhB · NC_067665.1 · 93,876–96,083 bp · −
rps7 · NC_067665.1 · 96,354–96,821 bp · −
trnN-GUU · NC_067665.1 · 107,819–107,890 bp · −
ndhF · NC_067665.1 · 109,256–111,487 bp · −
ndhD · NC_067665.1 · 114,262–115,791 bp · −
psaC · NC_067665.1 · 115,882–116,127 bp · −
ndhE · NC_067665.1 · 116,383–116,688 bp · −
ndhG · NC_067665.1 · 116,903–117,433 bp · −
ndhI · NC_067665.1 · 117,794–118,300 bp · −
ndhA · NC_067665.1 · 118,381–120,504 bp · −
ndhH · NC_067665.1 · 120,506–121,687 bp · −
rps15 · NC_067665.1 · 121,802–122,074 bp · −
ycf1 · NC_067665.1 · 122,511–128,033 bp · −
trnR-ACG · NC_067665.1 · 129,013–129,086 bp · −
rrn5 · NC_067665.1 · 129,330–129,450 bp · −
rrn4.5 · NC_067665.1 · 129,706–129,808 bp · −
rrn23 · NC_067665.1 · 129,907–132,717 bp · −
trnA-UGC · NC_067665.1 · 132,889–133,767 bp · −
trnI-GAU · NC_067665.1 · 133,832–134,850 bp · −
rrn16 · NC_067665.1 · 135,148–136,638 bp · −
trnV-GAC · NC_067665.1 · 136,865–136,936 bp · −
ycf15 · NC_067665.1 · 143,302–143,451 bp · −
ycf2 · NC_067665.1 · 143,641–150,471 bp · −
psbK · NC_067665.1 · 7,354–7,539 bp · +
psbI · NC_067665.1 · 7,927–8,037 bp · +
trnG-UCC · NC_067665.1 · 9,043–9,801 bp · +
trnR-UCU · NC_067665.1 · 9,992–10,063 bp · +
trnC-GCA · NC_067665.1 · 28,090–28,160 bp · +
petN · NC_067665.1 · 28,323–28,412 bp · +
trnT-GGU · NC_067665.1 · 31,055–31,126 bp · +
psbD · NC_067665.1 · 32,444–33,505 bp · +
psbC · NC_067665.1 · 33,453–34,874 bp · +
psbZ · NC_067665.1 · 35,544–35,732 bp · +
trnG-GCC · NC_067665.1 · 35,977–36,047 bp · +
trnS-GGA · NC_067665.1 · 44,944–45,030 bp · +
trnL-UAA · NC_067665.1 · 47,135–47,678 bp · +
trnF-GAA · NC_067665.1 · 47,972–48,044 bp · +
trnM-CAU · NC_067665.1 · 52,184–52,256 bp · +
rbcL · NC_067665.1 · 55,143–56,576 bp · +
accD · NC_067665.1 · 57,281–58,762 bp · +
psaI · NC_067665.1 · 59,463–59,573 bp · +
ycf4 · NC_067665.1 · 60,020–60,574 bp · +
cemA · NC_067665.1 · 61,166–61,855 bp · +
petA · NC_067665.1 · 62,070–63,032 bp · +
petL · NC_067665.1 · 65,741–65,836 bp · +
petG · NC_067665.1 · 66,011–66,124 bp · +
psaJ · NC_067665.1 · 66,844–66,978 bp · +
rpl33 · NC_067665.1 · 67,441–67,641 bp · +
rps18 · NC_067665.1 · 67,808–68,113 bp · +
rps12 · NC_067665.1 · 138,598–139,390 bp · +
psbB · NC_067665.1 · 72,089–73,615 bp · +
psbT · NC_067665.1 · 73,800–73,901 bp · +
psbH · NC_067665.1 · 74,204–74,422 bp · +
petB · NC_067665.1 · 74,548–75,913 bp · +
petD · NC_067665.1 · 76,102–77,294 bp · +
ycf2 · NC_067665.1 · 85,794–92,624 bp · +
ycf15 · NC_067665.1 · 92,814–92,963 bp · +
trnV-GAC · NC_067665.1 · 99,329–99,400 bp · +
rrn16 · NC_067665.1 · 99,627–101,117 bp · +
trnI-GAU · NC_067665.1 · 101,415–102,433 bp · +
trnA-UGC · NC_067665.1 · 102,498–103,376 bp · +
rrn23 · NC_067665.1 · 103,548–106,358 bp · +
rrn4.5 · NC_067665.1 · 106,457–106,559 bp · +
rrn5 · NC_067665.1 · 106,815–106,935 bp · +
trnR-ACG · NC_067665.1 · 107,179–107,252 bp · +
ycf1 · NC_067665.1 · 108,232–109,362 bp · +
rpl32 · NC_067665.1 · 111,957–112,127 bp · +
trnL-UAG · NC_067665.1 · 112,891–112,970 bp · +
ccsA · NC_067665.1 · 113,059–114,030 bp · +
trnN-GUU · NC_067665.1 · 128,375–128,446 bp · +
rps7 · NC_067665.1 · 139,444–139,911 bp · +
ndhB · NC_067665.1 · 140,182–142,389 bp · +
trnL-CAA · NC_067665.1 · 142,961–143,041 bp · +
trnI-CAU · NC_067665.1 · 150,566–150,639 bp · +
rpl23 · NC_067665.1 · 150,805–151,086 bp · +
rpl2 · NC_067665.1 · 151,105–152,583 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon leucophyllus
ANNOTATED PLASTOME
NC_067665.1
152,693 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38173 76346 114520 152693 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK OOC31_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 394 1452 1059 Locate
trnK-UUU gene − 1684 4265 2582 Locate
matK gene − 2005 3525 1521 Locate
OOC31_pgp086 gene − 4792 5937 1146 Locate
trnQ-UUG gene − 6889 6960 72 Locate
psbK gene + 7354 7539 186 Locate
psbI gene + 7927 8037 111 Locate
trnS-GCU gene − 8194 8281 88 Locate
trnG-UCC gene + 9043 9801 759 Locate
trnR-UCU gene + 9992 10063 72 Locate
atpA gene − 10167 11690 1524 Locate
atpF gene − 11797 13042 1246 Locate
atpH gene − 13334 13579 246 Locate
atpI gene − 14580 15323 744 Locate
rps2 gene − 15549 16259 711 Locate
rpoC2 gene − 16475 20656 4182 Locate
rpoC1 gene − 20821 23655 2835 Locate
rpoB gene − 23682 26894 3213 Locate
trnC-GCA gene + 28090 28160 71 Locate
petN gene + 28323 28412 90 Locate
psbM gene − 29405 29509 105 Locate
trnD-GUC gene − 30028 30101 74 Locate
trnY-GUA gene − 30212 30295 84 Locate
trnE-UUC gene − 30373 30445 73 Locate
trnT-GGU gene + 31055 31126 72 Locate
psbD gene + 32444 33505 1062 Locate
psbC gene + 33453 34874 1422 Locate
trnS-UGA gene − 35111 35203 93 Locate
psbZ gene + 35544 35732 189 Locate
trnG-GCC gene + 35977 36047 71 Locate
trnfM-CAU gene − 36234 36307 74 Locate
rps14 gene − 36453 36755 303 Locate
psaB gene − 36878 39082 2205 Locate
psaA gene − 39108 41360 2253 Locate
ycf3 gene − 42133 44079 1947 Locate
trnS-GGA gene + 44944 45030 87 Locate
rps4 gene − 45327 45932 606 Locate
trnT-UGU gene − 46361 46433 73 Locate
trnL-UAA gene + 47135 47678 544 Locate
trnF-GAA gene + 47972 48044 73 Locate
ndhJ gene − 48712 49188 477 Locate
ndhK gene − 49299 49976 678 Locate
ndhC gene − 50028 50390 363 Locate
trnV-UAC gene − 51348 52003 656 Locate
trnM-CAU gene + 52184 52256 73 Locate
atpE gene − 52457 52858 402 Locate
atpB gene − 52855 54351 1497 Locate
rbcL gene + 55143 56576 1434 Locate
accD gene + 57281 58762 1482 Locate
psaI gene + 59463 59573 111 Locate
ycf4 gene + 60020 60574 555 Locate
cemA gene + 61166 61855 690 Locate
petA gene + 62070 63032 963 Locate
psbJ gene − 64066 64188 123 Locate
psbL gene − 64323 64439 117 Locate
psbF gene − 64463 64582 120 Locate
psbE gene − 64597 64848 252 Locate
petL gene + 65741 65836 96 Locate
petG gene + 66011 66124 114 Locate
trnW-CCA gene − 66247 66320 74 Locate
trnP-UGG gene − 66489 66562 74 Locate
psaJ gene + 66844 66978 135 Locate
rpl33 gene + 67441 67641 201 Locate
rps18 gene + 67808 68113 306 Locate
rpl20 gene − 68349 68735 387 Locate
rps12 gene − 69469 69582 114 Locate
clpP gene − 69701 71616 1916 Locate
psbB gene + 72089 73615 1527 Locate
psbT gene + 73800 73901 102 Locate
psbN gene − 73967 74098 132 Locate
psbH gene + 74204 74422 219 Locate
petB gene + 74548 75913 1366 Locate
petD gene + 76102 77294 1193 Locate
rpoA gene − 77471 78478 1008 Locate
rps11 gene − 78550 78966 417 Locate
rpl36 gene − 79082 79195 114 Locate
infA gene − 79291 79524 234 Locate
rps8 gene − 79651 80055 405 Locate
rpl14 gene − 80238 80606 369 Locate
rpl16 gene − 80740 82007 1268 Locate
rps3 gene − 82151 82813 663 Locate
rpl22 gene − 82798 83271 474 Locate
rps19 gene − 83336 83614 279 Locate
rpl2 gene − 83682 85160 1479 Locate
rpl23 gene − 85179 85460 282 Locate
trnI-CAU gene − 85626 85699 74 Locate
ycf2 gene + 85794 92624 6831 Locate
ycf15 gene + 92814 92963 150 Locate
trnL-CAA gene − 93224 93304 81 Locate
ndhB gene − 93876 96083 2208 Locate
rps7 gene − 96354 96821 468 Locate
rps12 gene − 96875 97667 793 Locate
trnV-GAC gene + 99329 99400 72 Locate
rrn16 gene + 99627 101117 1491 Locate
trnI-GAU gene + 101415 102433 1019 Locate
trnA-UGC gene + 102498 103376 879 Locate
rrn23 gene + 103548 106358 2811 Locate
rrn4.5 gene + 106457 106559 103 Locate
rrn5 gene + 106815 106935 121 Locate
trnR-ACG gene + 107179 107252 74 Locate
trnN-GUU gene − 107819 107890 72 Locate
ycf1 gene + 108232 109362 1131 Locate
ndhF gene − 109256 111487 2232 Locate
rpl32 gene + 111957 112127 171 Locate
trnL-UAG gene + 112891 112970 80 Locate
ccsA gene + 113059 114030 972 Locate
ndhD gene − 114262 115791 1530 Locate
psaC gene − 115882 116127 246 Locate
ndhE gene − 116383 116688 306 Locate
ndhG gene − 116903 117433 531 Locate
ndhI gene − 117794 118300 507 Locate
ndhA gene − 118381 120504 2124 Locate
ndhH gene − 120506 121687 1182 Locate
rps15 gene − 121802 122074 273 Locate
ycf1 gene − 122511 128033 5523 Locate
trnN-GUU gene + 128375 128446 72 Locate
trnR-ACG gene − 129013 129086 74 Locate
rrn5 gene − 129330 129450 121 Locate
rrn4.5 gene − 129706 129808 103 Locate
rrn23 gene − 129907 132717 2811 Locate
trnA-UGC gene − 132889 133767 879 Locate
trnI-GAU gene − 133832 134850 1019 Locate
rrn16 gene − 135148 136638 1491 Locate
trnV-GAC gene − 136865 136936 72 Locate
rps12 gene + 138598 139390 793 Locate
rps7 gene + 139444 139911 468 Locate
ndhB gene + 140182 142389 2208 Locate
trnL-CAA gene + 142961 143041 81 Locate
ycf15 gene − 143302 143451 150 Locate
ycf2 gene − 143641 150471 6831 Locate
trnI-CAU gene + 150566 150639 74 Locate
rpl23 gene + 150805 151086 282 Locate
rpl2 gene + 151105 152583 1479 Locate
Status Available
Accession NC_067665.1
Length 152,693 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources