Coordinate-aware organelle record

Isodon leucophyllus chloroplast genome

Available NC_067665.1 152,693 bp 133 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 11-85 bp · − strandpsbA · gene · 394-1,452 bp · − strandtrnK-UUU · gene · 1,684-4,265 bp · − strandmatK · gene · 2,005-3,525 bp · − strandOOC31_pgp086 · gene · 4,792-5,937 bp · − strandtrnQ-UUG · gene · 6,889-6,960 bp · − strandpsbK · gene · 7,354-7,539 bp · + strandpsbI · gene · 7,927-8,037 bp · + strandtrnS-GCU · gene · 8,194-8,281 bp · − strandtrnG-UCC · gene · 9,043-9,801 bp · + strandtrnR-UCU · gene · 9,992-10,063 bp · + strandatpA · gene · 10,167-11,690 bp · − strandatpF · gene · 11,797-13,042 bp · − strandatpH · gene · 13,334-13,579 bp · − strandatpI · gene · 14,580-15,323 bp · − strandrps2 · gene · 15,549-16,259 bp · − strandrpoC2 · gene · 16,475-20,656 bp · − strandrpoC1 · gene · 20,821-23,655 bp · − strandrpoB · gene · 23,682-26,894 bp · − strandtrnC-GCA · gene · 28,090-28,160 bp · + strandpetN · gene · 28,323-28,412 bp · + strandpsbM · gene · 29,405-29,509 bp · − strandtrnD-GUC · gene · 30,028-30,101 bp · − strandtrnY-GUA · gene · 30,212-30,295 bp · − strandtrnE-UUC · gene · 30,373-30,445 bp · − strandtrnT-GGU · gene · 31,055-31,126 bp · + strandpsbD · gene · 32,444-33,505 bp · + strandpsbC · gene · 33,453-34,874 bp · + strandtrnS-UGA · gene · 35,111-35,203 bp · − strandpsbZ · gene · 35,544-35,732 bp · + strandtrnG-GCC · gene · 35,977-36,047 bp · + strandtrnfM-CAU · gene · 36,234-36,307 bp · − strandrps14 · gene · 36,453-36,755 bp · − strandpsaB · gene · 36,878-39,082 bp · − strandpsaA · gene · 39,108-41,360 bp · − strandycf3 · gene · 42,133-44,079 bp · − strandtrnS-GGA · gene · 44,944-45,030 bp · + strandrps4 · gene · 45,327-45,932 bp · − strandtrnT-UGU · gene · 46,361-46,433 bp · − strandtrnL-UAA · gene · 47,135-47,678 bp · + strandtrnF-GAA · gene · 47,972-48,044 bp · + strandndhJ · gene · 48,712-49,188 bp · − strandndhK · gene · 49,299-49,976 bp · − strandndhC · gene · 50,028-50,390 bp · − strandtrnV-UAC · gene · 51,348-52,003 bp · − strandtrnM-CAU · gene · 52,184-52,256 bp · + strandatpE · gene · 52,457-52,858 bp · − strandatpB · gene · 52,855-54,351 bp · − strandrbcL · gene · 55,143-56,576 bp · + strandaccD · gene · 57,281-58,762 bp · + strandpsaI · gene · 59,463-59,573 bp · + strandycf4 · gene · 60,020-60,574 bp · + strandcemA · gene · 61,166-61,855 bp · + strandpetA · gene · 62,070-63,032 bp · + strandpsbJ · gene · 64,066-64,188 bp · − strandpsbL · gene · 64,323-64,439 bp · − strandpsbF · gene · 64,463-64,582 bp · − strandpsbE · gene · 64,597-64,848 bp · − strandpetL · gene · 65,741-65,836 bp · + strandpetG · gene · 66,011-66,124 bp · + strandtrnW-CCA · gene · 66,247-66,320 bp · − strandtrnP-UGG · gene · 66,489-66,562 bp · − strandpsaJ · gene · 66,844-66,978 bp · + strandrpl33 · gene · 67,441-67,641 bp · + strandrps18 · gene · 67,808-68,113 bp · + strandrpl20 · gene · 68,349-68,735 bp · − strandrps12 · gene · 69,469-97,667 bp · − strandrps12 · gene · 69,469-139,390 bp · + strandclpP · gene · 69,701-71,616 bp · − strandpsbB · gene · 72,089-73,615 bp · + strandpsbT · gene · 73,800-73,901 bp · + strandpsbN · gene · 73,967-74,098 bp · − strandpsbH · gene · 74,204-74,422 bp · + strandpetB · gene · 74,548-75,913 bp · + strandpetD · gene · 76,102-77,294 bp · + strandrpoA · gene · 77,471-78,478 bp · − strandrps11 · gene · 78,550-78,966 bp · − strandrpl36 · gene · 79,082-79,195 bp · − strandinfA · gene · 79,291-79,524 bp · − strandrps8 · gene · 79,651-80,055 bp · − strandrpl14 · gene · 80,238-80,606 bp · − strandrpl16 · gene · 80,740-82,007 bp · − strandrps3 · gene · 82,151-82,813 bp · − strandrpl22 · gene · 82,798-83,271 bp · − strandrps19 · gene · 83,336-83,614 bp · − strandrpl2 · gene · 83,682-85,160 bp · − strandrpl23 · gene · 85,179-85,460 bp · − strandtrnI-CAU · gene · 85,626-85,699 bp · − strandycf2 · gene · 85,794-92,624 bp · + strandycf15 · gene · 92,814-92,963 bp · + strandtrnL-CAA · gene · 93,224-93,304 bp · − strandndhB · gene · 93,876-96,083 bp · − strandrps7 · gene · 96,354-96,821 bp · − strandtrnV-GAC · gene · 99,329-99,400 bp · + strandrrn16 · gene · 99,627-101,117 bp · + strandtrnI-GAU · gene · 101,415-102,433 bp · + strandtrnA-UGC · gene · 102,498-103,376 bp · + strandrrn23 · gene · 103,548-106,358 bp · + strandrrn4.5 · gene · 106,457-106,559 bp · + strandrrn5 · gene · 106,815-106,935 bp · + strandtrnR-ACG · gene · 107,179-107,252 bp · + strandtrnN-GUU · gene · 107,819-107,890 bp · − strandycf1 · gene · 108,232-109,362 bp · + strandndhF · gene · 109,256-111,487 bp · − strandrpl32 · gene · 111,957-112,127 bp · + strandtrnL-UAG · gene · 112,891-112,970 bp · + strandccsA · gene · 113,059-114,030 bp · + strandndhD · gene · 114,262-115,791 bp · − strandpsaC · gene · 115,882-116,127 bp · − strandndhE · gene · 116,383-116,688 bp · − strandndhG · gene · 116,903-117,433 bp · − strandndhI · gene · 117,794-118,300 bp · − strandndhA · gene · 118,381-120,504 bp · − strandndhH · gene · 120,506-121,687 bp · − strandrps15 · gene · 121,802-122,074 bp · − strandycf1 · gene · 122,511-128,033 bp · − strandtrnN-GUU · gene · 128,375-128,446 bp · + strandtrnR-ACG · gene · 129,013-129,086 bp · − strandrrn5 · gene · 129,330-129,450 bp · − strandrrn4.5 · gene · 129,706-129,808 bp · − strandrrn23 · gene · 129,907-132,717 bp · − strandtrnA-UGC · gene · 132,889-133,767 bp · − strandtrnI-GAU · gene · 133,832-134,850 bp · − strandrrn16 · gene · 135,148-136,638 bp · − strandtrnV-GAC · gene · 136,865-136,936 bp · − strandrps7 · gene · 139,444-139,911 bp · + strandndhB · gene · 140,182-142,389 bp · + strandtrnL-CAA · gene · 142,961-143,041 bp · + strandycf15 · gene · 143,302-143,451 bp · − strandycf2 · gene · 143,641-150,471 bp · − strandtrnI-CAU · gene · 150,566-150,639 bp · + strandrpl23 · gene · 150,805-151,086 bp · + strandrpl2 · gene · 151,105-152,583 bp · + strandIsodon leucophyllusANNOTATED PLASTOMENC_067665.1152,693 bp · 133 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherAtp SynthaseRibosomal ProteinRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: NC_067665.1Features: 133 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−108575
psbAgenephotosystem-ii−39314521059
trnK-UUUgenetranslation-rna−168342652582
matKgeneother−200435251521
OOC31_pgp086geneother−479159371146
trnQ-UUGgenetranslation-rna−6888696072
psbKgenephotosystem-ii+73537539186
psbIgenephotosystem-ii+79268037111
trnS-GCUgenetranslation-rna−8193828188
trnG-UCCgenetranslation-rna+90429801759
trnR-UCUgenetranslation-rna+99911006372
atpAgeneatp-synthase−10166116901524
atpFgeneatp-synthase−11796130421246
atpHgeneatp-synthase−1333313579246
atpIgeneatp-synthase−1457915323744
rps2generibosomal-protein−1554816259711
rpoC2generna-polymerase−16474206564182
rpoC1generna-polymerase−20820236552835
rpoBgenerna-polymerase−23681268943213
trnC-GCAgenetranslation-rna+280892816071
petNgenecytochrome+283222841290
psbMgenephotosystem-ii−2940429509105
trnD-GUCgenetranslation-rna−300273010174
trnY-GUAgenetranslation-rna−302113029584
trnE-UUCgenetranslation-rna−303723044573
trnT-GGUgenetranslation-rna+310543112672
psbDgenephotosystem-ii+32443335051062
psbCgenephotosystem-ii+33452348741422
trnS-UGAgenetranslation-rna−351103520393
psbZgenephotosystem-ii+3554335732189
trnG-GCCgenetranslation-rna+359763604771
trnfM-CAUgenetranslation-rna−362333630774
rps14generibosomal-protein−3645236755303
psaBgenephotosystem-i−36877390822205
psaAgenephotosystem-i−39107413602253
ycf3geneother−42132440791947
trnS-GGAgenetranslation-rna+449434503087
rps4generibosomal-protein−4532645932606
trnT-UGUgenetranslation-rna−463604643373
trnL-UAAgenetranslation-rna+4713447678544
trnF-GAAgenetranslation-rna+479714804473
ndhJgenenad-dehydrogenase−4871149188477
ndhKgenenad-dehydrogenase−4929849976678
ndhCgenenad-dehydrogenase−5002750390363
trnV-UACgenetranslation-rna−5134752003656
trnM-CAUgenetranslation-rna+521835225673
atpEgeneatp-synthase−5245652858402
atpBgeneatp-synthase−52854543511497
rbcLgeneother+55142565761434
accDgeneother+57280587621482
psaIgenephotosystem-i+5946259573111
ycf4geneother+6001960574555
cemAgeneother+6116561855690
petAgenecytochrome+6206963032963
psbJgenephotosystem-ii−6406564188123
psbLgenephotosystem-ii−6432264439117
psbFgenephotosystem-ii−6446264582120
psbEgenephotosystem-ii−6459664848252
petLgenecytochrome+657406583696
petGgenecytochrome+6601066124114
trnW-CCAgenetranslation-rna−662466632074
trnP-UGGgenetranslation-rna−664886656274
psaJgenephotosystem-i+6684366978135
rpl33generibosomal-protein+6744067641201
rps18generibosomal-protein+6780768113306
rpl20generibosomal-protein−6834868735387
rps12generibosomal-protein−694689766728199
rps12generibosomal-protein+6946813939069922
clpPgeneother−69700716161916
psbBgenephotosystem-ii+72088736151527
psbTgenephotosystem-ii+7379973901102
psbNgenephotosystem-ii−7396674098132
psbHgenephotosystem-ii+7420374422219
petBgenecytochrome+74547759131366
petDgenecytochrome+76101772941193
rpoAgenerna-polymerase−77470784781008
rps11generibosomal-protein−7854978966417
rpl36generibosomal-protein−7908179195114
infAgeneother−7929079524234
rps8generibosomal-protein−7965080055405
rpl14generibosomal-protein−8023780606369
rpl16generibosomal-protein−80739820071268
rps3generibosomal-protein−8215082813663
rpl22generibosomal-protein−8279783271474
rps19generibosomal-protein−8333583614279
rpl2generibosomal-protein−83681851601479
rpl23generibosomal-protein−8517885460282
trnI-CAUgenetranslation-rna−856258569974
ycf2geneother+85793926246831
ycf15geneother+9281392963150
trnL-CAAgenetranslation-rna−932239330481
ndhBgenenad-dehydrogenase−93875960832208
rps7generibosomal-protein−9635396821468
trnV-GACgenetranslation-rna+993289940072
rrn16generibosomal-rna+996261011171491
trnI-GAUgenetranslation-rna+1014141024331019
trnA-UGCgenetranslation-rna+102497103376879
rrn23generibosomal-rna+1035471063582811
rrn4.5generibosomal-rna+106456106559103
rrn5generibosomal-rna+106814106935121
trnR-ACGgenetranslation-rna+10717810725274
trnN-GUUgenetranslation-rna−10781810789072
ycf1geneother+1082311093621131
ndhFgenenad-dehydrogenase−1092551114872232
rpl32generibosomal-protein+111956112127171
trnL-UAGgenetranslation-rna+11289011297080
ccsAgeneother+113058114030972
ndhDgenenad-dehydrogenase−1142611157911530
psaCgenephotosystem-i−115881116127246
ndhEgenenad-dehydrogenase−116382116688306
ndhGgenenad-dehydrogenase−116902117433531
ndhIgenenad-dehydrogenase−117793118300507
ndhAgenenad-dehydrogenase−1183801205042124
ndhHgenenad-dehydrogenase−1205051216871182
rps15generibosomal-protein−121801122074273
ycf1geneother−1225101280335523
trnN-GUUgenetranslation-rna+12837412844672
trnR-ACGgenetranslation-rna−12901212908674
rrn5generibosomal-rna−129329129450121
rrn4.5generibosomal-rna−129705129808103
rrn23generibosomal-rna−1299061327172811
trnA-UGCgenetranslation-rna−132888133767879
trnI-GAUgenetranslation-rna−1338311348501019
rrn16generibosomal-rna−1351471366381491
trnV-GACgenetranslation-rna−13686413693672
rps7generibosomal-protein+139443139911468
ndhBgenenad-dehydrogenase+1401811423892208
trnL-CAAgenetranslation-rna+14296014304181
ycf15geneother−143301143451150
ycf2geneother−1436401504716831
trnI-CAUgenetranslation-rna+15056515063974
rpl23generibosomal-protein+150804151086282
rpl2generibosomal-protein+1511041525831479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources