Coordinate-aware organelle record

Isodon loxothyrsus chloroplast genome

Available NC_067667.1 152,640 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	392	1451	1059
trnK-UUU	gene	translation-rna	−	1682	4264	2582
matK	gene	other	−	2003	3524	1521
OOC30_pgp086	gene	other	−	4789	5935	1146
trnQ-UUG	gene	translation-rna	−	6874	6946	72
psbK	gene	photosystem-ii	+	7339	7525	186
psbI	gene	photosystem-ii	+	7912	8023	111
trnS-GCU	gene	translation-rna	−	8179	8267	88
trnG-UCC	gene	translation-rna	+	9037	9798	761
trnR-UCU	gene	translation-rna	+	9988	10060	72
atpA	gene	atp-synthase	−	10163	11687	1524
atpF	gene	atp-synthase	−	11796	13042	1246
atpH	gene	atp-synthase	−	13333	13579	246
atpI	gene	atp-synthase	−	14579	15323	744
rps2	gene	ribosomal-protein	−	15548	16259	711
rpoC2	gene	rna-polymerase	−	16475	20657	4182
rpoC1	gene	rna-polymerase	−	20821	23655	2834
rpoB	gene	rna-polymerase	−	23681	26894	3213
trnC-GCA	gene	translation-rna	+	28082	28153	71
petN	gene	cytochrome	+	28315	28405	90
psbM	gene	photosystem-ii	−	29396	29501	105
trnD-GUC	gene	translation-rna	−	30019	30093	74
trnY-GUA	gene	translation-rna	−	30203	30287	84
trnE-UUC	gene	translation-rna	−	30364	30437	73
trnT-GGU	gene	translation-rna	+	31046	31118	72
psbD	gene	photosystem-ii	+	32435	33497	1062
psbC	gene	photosystem-ii	+	33444	34866	1422
trnS-UGA	gene	translation-rna	−	35101	35194	93
psbZ	gene	photosystem-ii	+	35534	35723	189
trnG-GCC	gene	translation-rna	+	35967	36038	71
trnfM-CAU	gene	translation-rna	−	36225	36299	74
rps14	gene	ribosomal-protein	−	36444	36747	303
psaB	gene	photosystem-i	−	36869	39074	2205
psaA	gene	photosystem-i	−	39099	41352	2253
ycf3	gene	other	−	42120	44068	1948
trnS-GGA	gene	translation-rna	+	44931	45018	87
rps4	gene	ribosomal-protein	−	45318	45924	606
trnT-UGU	gene	translation-rna	−	46318	46391	73
trnL-UAA	gene	translation-rna	+	47076	47641	565
trnF-GAA	gene	translation-rna	+	47934	48007	73
ndhJ	gene	nad-dehydrogenase	−	48674	49151	477
ndhK	gene	nad-dehydrogenase	−	49261	49939	678
ndhC	gene	nad-dehydrogenase	−	49990	50353	363
trnV-UAC	gene	translation-rna	−	51304	51961	657
trnM-CAU	gene	translation-rna	+	52141	52214	73
atpE	gene	atp-synthase	−	52414	52816	402
atpB	gene	atp-synthase	−	52812	54309	1497
rbcL	gene	other	+	55099	56533	1434
accD	gene	other	+	57222	58704	1482
psaI	gene	photosystem-i	+	59404	59515	111
ycf4	gene	other	+	59965	60520	555
cemA	gene	other	+	61103	61793	690
petA	gene	cytochrome	+	62007	62970	963
psbJ	gene	photosystem-ii	−	64008	64131	123
psbL	gene	photosystem-ii	−	64265	64382	117
psbF	gene	photosystem-ii	−	64405	64525	120
psbE	gene	photosystem-ii	−	64539	64791	252
petL	gene	cytochrome	+	65683	65779	96
petG	gene	cytochrome	+	65953	66067	114
trnW-CCA	gene	translation-rna	−	66189	66263	74
trnP-UGG	gene	translation-rna	−	66431	66505	74
psaJ	gene	photosystem-i	+	66786	66921	135
rpl33	gene	ribosomal-protein	+	67382	67583	201
rps18	gene	ribosomal-protein	+	67749	68055	306
rpl20	gene	ribosomal-protein	−	68291	68678	387
rps12	gene	ribosomal-protein	−	69414	97614	28200
rps12	gene	ribosomal-protein	+	69414	139337	69923
clpP	gene	other	−	69646	71564	1918
psbB	gene	photosystem-ii	+	72036	73563	1527
psbT	gene	photosystem-ii	+	73746	73848	102
psbN	gene	photosystem-ii	−	73913	74045	132
psbH	gene	photosystem-ii	+	74150	74369	219
petB	gene	cytochrome	+	74494	75855	1361
petD	gene	cytochrome	+	76043	77236	1193
rpoA	gene	rna-polymerase	−	77412	78426	1014
rps11	gene	ribosomal-protein	−	78497	78914	417
rpl36	gene	ribosomal-protein	−	79029	79143	114
infA	gene	other	−	79238	79472	234
rps8	gene	ribosomal-protein	−	79598	80003	405
rpl14	gene	ribosomal-protein	−	80185	80554	369
rpl16	gene	ribosomal-protein	−	80686	81954	1268
rps3	gene	ribosomal-protein	−	82097	82760	663
rpl22	gene	ribosomal-protein	−	82744	83218	474
rps19	gene	ribosomal-protein	−	83282	83561	279
rpl2	gene	ribosomal-protein	−	83628	85107	1479
rpl23	gene	ribosomal-protein	−	85125	85407	282
trnI-CAU	gene	translation-rna	−	85572	85646	74
ycf2	gene	other	+	85740	92571	6831
ycf15	gene	other	+	92760	92910	150
trnL-CAA	gene	translation-rna	−	93170	93251	81
ndhB	gene	nad-dehydrogenase	−	93822	96030	2208
rps7	gene	ribosomal-protein	−	96300	96768	468
trnV-GAC	gene	translation-rna	+	99275	99347	72
rrn16	gene	ribosomal-rna	+	99573	101064	1491
trnI-GAU	gene	translation-rna	+	101361	102380	1019
trnA-UGC	gene	translation-rna	+	102444	103323	879
rrn23	gene	ribosomal-rna	+	103494	106305	2811
rrn4.5	gene	ribosomal-rna	+	106403	106506	103
rrn5	gene	ribosomal-rna	+	106761	106882	121
trnR-ACG	gene	translation-rna	+	107125	107199	74
trnN-GUU	gene	translation-rna	−	107765	107837	72
ycf1	gene	other	+	108178	109309	1131
ndhF	gene	nad-dehydrogenase	−	109202	111434	2232
rpl32	gene	ribosomal-protein	+	111909	112080	171
trnL-UAG	gene	translation-rna	+	112845	112925	80
ccsA	gene	other	+	113013	113985	972
ndhD	gene	nad-dehydrogenase	−	114216	115746	1530
psaC	gene	photosystem-i	−	115836	116082	246
ndhE	gene	nad-dehydrogenase	−	116337	116643	306
ndhG	gene	nad-dehydrogenase	−	116857	117388	531
ndhI	gene	nad-dehydrogenase	−	117747	118254	507
ndhA	gene	nad-dehydrogenase	−	118334	120458	2124
ndhH	gene	nad-dehydrogenase	−	120459	121641	1182
rps15	gene	ribosomal-protein	−	121755	122028	273
ycf1	gene	other	−	122457	127980	5523
trnN-GUU	gene	translation-rna	+	128321	128393	72
trnR-ACG	gene	translation-rna	−	128959	129033	74
rrn5	gene	ribosomal-rna	−	129276	129397	121
rrn4.5	gene	ribosomal-rna	−	129652	129755	103
rrn23	gene	ribosomal-rna	−	129853	132664	2811
trnA-UGC	gene	translation-rna	−	132835	133714	879
trnI-GAU	gene	translation-rna	−	133778	134797	1019
rrn16	gene	ribosomal-rna	−	135094	136585	1491
trnV-GAC	gene	translation-rna	−	136811	136883	72
rps7	gene	ribosomal-protein	+	139390	139858	468
ndhB	gene	nad-dehydrogenase	+	140128	142336	2208
trnL-CAA	gene	translation-rna	+	142907	142988	81
ycf15	gene	other	−	143248	143398	150
ycf2	gene	other	−	143587	150418	6831
trnI-CAU	gene	translation-rna	+	150512	150586	74
rpl23	gene	ribosomal-protein	+	150751	151033	282
rpl2	gene	ribosomal-protein	+	151051	152530	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_067667.1DNA · accDNC_067667DNA · atpBNC_067667DNA · matKNC_067667DNA · ndhFNC_067667DNA · psbANC_067667DNA · rbcLNC_067667DNA · rps12NC_067667DNA · ycf1NC_067667