Isodon lungshengensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067668.1 · 11–85 bp · −
psbA · NC_067668.1 · 397–1,455 bp · −
trnK-UUU · NC_067668.1 · 1,687–4,267 bp · −
matK · NC_067668.1 · 2,007–3,527 bp · −
OOC29_pgp086 · NC_067668.1 · 4,794–5,939 bp · −
trnQ-UUG · NC_067668.1 · 6,885–6,956 bp · −
trnS-GCU · NC_067668.1 · 8,190–8,277 bp · −
atpA · NC_067668.1 · 10,164–11,687 bp · −
atpF · NC_067668.1 · 11,796–13,042 bp · −
atpH · NC_067668.1 · 13,334–13,579 bp · −
atpI · NC_067668.1 · 14,580–15,323 bp · −
rps2 · NC_067668.1 · 15,554–16,264 bp · −
rpoC2 · NC_067668.1 · 16,482–20,663 bp · −
rpoC1 · NC_067668.1 · 20,828–23,661 bp · −
rpoB · NC_067668.1 · 23,688–26,900 bp · −
psbM · NC_067668.1 · 28,938–29,042 bp · −
trnD-GUC · NC_067668.1 · 29,553–29,626 bp · −
trnY-GUA · NC_067668.1 · 29,737–29,820 bp · −
trnE-UUC · NC_067668.1 · 29,898–29,970 bp · −
trnS-UGA · NC_067668.1 · 34,637–34,729 bp · −
trnfM-CAU · NC_067668.1 · 35,761–35,834 bp · −
rps14 · NC_067668.1 · 35,980–36,282 bp · −
psaB · NC_067668.1 · 36,405–38,609 bp · −
psaA · NC_067668.1 · 38,635–40,887 bp · −
ycf3 · NC_067668.1 · 41,663–43,610 bp · −
rps4 · NC_067668.1 · 44,855–45,460 bp · −
trnT-UGU · NC_067668.1 · 45,842–45,914 bp · −
ndhJ · NC_067668.1 · 48,199–48,675 bp · −
ndhK · NC_067668.1 · 48,786–49,463 bp · −
ndhC · NC_067668.1 · 49,515–49,877 bp · −
trnV-UAC · NC_067668.1 · 50,834–51,489 bp · −
atpE · NC_067668.1 · 51,943–52,344 bp · −
atpB · NC_067668.1 · 52,341–53,837 bp · −
psbJ · NC_067668.1 · 63,555–63,677 bp · −
psbL · NC_067668.1 · 63,812–63,928 bp · −
psbF · NC_067668.1 · 63,952–64,071 bp · −
psbE · NC_067668.1 · 64,086–64,337 bp · −
trnW-CCA · NC_067668.1 · 65,735–65,808 bp · −
trnP-UGG · NC_067668.1 · 65,977–66,050 bp · −
rpl20 · NC_067668.1 · 67,897–68,283 bp · −
rps12 · NC_067668.1 · 69,016–69,129 bp · −
rps12 · NC_067668.1 · 96,443–97,235 bp · −
clpP · NC_067668.1 · 69,248–71,183 bp · −
psbN · NC_067668.1 · 73,534–73,665 bp · −
rpoA · NC_067668.1 · 77,039–78,046 bp · −
rps11 · NC_067668.1 · 78,118–78,534 bp · −
rpl36 · NC_067668.1 · 78,650–78,763 bp · −
infA · NC_067668.1 · 78,859–79,092 bp · −
rps8 · NC_067668.1 · 79,219–79,623 bp · −
rpl14 · NC_067668.1 · 79,806–80,174 bp · −
rpl16 · NC_067668.1 · 80,308–81,575 bp · −
rps3 · NC_067668.1 · 81,719–82,381 bp · −
rpl22 · NC_067668.1 · 82,366–82,839 bp · −
rps19 · NC_067668.1 · 82,904–83,182 bp · −
rpl2 · NC_067668.1 · 83,250–84,728 bp · −
rpl23 · NC_067668.1 · 84,747–85,028 bp · −
trnI-CAU · NC_067668.1 · 85,194–85,267 bp · −
trnL-CAA · NC_067668.1 · 92,792–92,872 bp · −
ndhB · NC_067668.1 · 93,444–95,651 bp · −
rps7 · NC_067668.1 · 95,922–96,389 bp · −
trnN-GUU · NC_067668.1 · 107,387–107,458 bp · −
ndhF · NC_067668.1 · 108,824–111,055 bp · −
ndhD · NC_067668.1 · 113,832–115,361 bp · −
psaC · NC_067668.1 · 115,452–115,697 bp · −
ndhE · NC_067668.1 · 115,953–116,258 bp · −
ndhG · NC_067668.1 · 116,473–117,003 bp · −
ndhI · NC_067668.1 · 117,362–117,868 bp · −
ndhA · NC_067668.1 · 117,949–120,071 bp · −
ndhH · NC_067668.1 · 120,073–121,254 bp · −
rps15 · NC_067668.1 · 121,369–121,641 bp · −
ycf1 · NC_067668.1 · 122,071–127,593 bp · −
trnR-ACG · NC_067668.1 · 128,573–128,646 bp · −
rrn5 · NC_067668.1 · 128,890–129,010 bp · −
rrn4.5 · NC_067668.1 · 129,266–129,368 bp · −
rrn23 · NC_067668.1 · 129,467–132,277 bp · −
trnA-UGC · NC_067668.1 · 132,449–133,327 bp · −
trnI-GAU · NC_067668.1 · 133,392–134,410 bp · −
rrn16 · NC_067668.1 · 134,708–136,198 bp · −
trnV-GAC · NC_067668.1 · 136,425–136,496 bp · −
ycf15 · NC_067668.1 · 142,862–143,011 bp · −
ycf2 · NC_067668.1 · 143,201–150,031 bp · −
psbK · NC_067668.1 · 7,350–7,535 bp · +
psbI · NC_067668.1 · 7,923–8,033 bp · +
trnG-UCC · NC_067668.1 · 9,039–9,798 bp · +
trnR-UCU · NC_067668.1 · 9,989–10,060 bp · +
trnC-GCA · NC_067668.1 · 28,089–28,159 bp · +
petN · NC_067668.1 · 28,322–28,411 bp · +
trnT-GGU · NC_067668.1 · 30,580–30,651 bp · +
psbD · NC_067668.1 · 31,969–33,030 bp · +
psbC · NC_067668.1 · 32,978–34,399 bp · +
psbZ · NC_067668.1 · 35,070–35,258 bp · +
trnG-GCC · NC_067668.1 · 35,503–35,573 bp · +
trnS-GGA · NC_067668.1 · 44,472–44,558 bp · +
trnL-UAA · NC_067668.1 · 46,601–47,165 bp · +
trnF-GAA · NC_067668.1 · 47,459–47,531 bp · +
trnM-CAU · NC_067668.1 · 51,670–51,742 bp · +
rbcL · NC_067668.1 · 54,628–56,061 bp · +
accD · NC_067668.1 · 56,766–58,247 bp · +
psaI · NC_067668.1 · 58,948–59,058 bp · +
ycf4 · NC_067668.1 · 59,506–60,060 bp · +
cemA · NC_067668.1 · 60,651–61,340 bp · +
petA · NC_067668.1 · 61,555–62,517 bp · +
petL · NC_067668.1 · 65,229–65,324 bp · +
petG · NC_067668.1 · 65,499–65,612 bp · +
psaJ · NC_067668.1 · 66,332–66,466 bp · +
rpl33 · NC_067668.1 · 66,990–67,190 bp · +
rps18 · NC_067668.1 · 67,357–67,662 bp · +
rps12 · NC_067668.1 · 138,158–138,950 bp · +
psbB · NC_067668.1 · 71,656–73,182 bp · +
psbT · NC_067668.1 · 73,367–73,468 bp · +
psbH · NC_067668.1 · 73,771–73,989 bp · +
petB · NC_067668.1 · 74,115–75,481 bp · +
petD · NC_067668.1 · 75,670–76,862 bp · +
ycf2 · NC_067668.1 · 85,362–92,192 bp · +
ycf15 · NC_067668.1 · 92,382–92,531 bp · +
trnV-GAC · NC_067668.1 · 98,897–98,968 bp · +
rrn16 · NC_067668.1 · 99,195–100,685 bp · +
trnI-GAU · NC_067668.1 · 100,983–102,001 bp · +
trnA-UGC · NC_067668.1 · 102,066–102,944 bp · +
rrn23 · NC_067668.1 · 103,116–105,926 bp · +
rrn4.5 · NC_067668.1 · 106,025–106,127 bp · +
rrn5 · NC_067668.1 · 106,383–106,503 bp · +
trnR-ACG · NC_067668.1 · 106,747–106,820 bp · +
ycf1 · NC_067668.1 · 107,800–108,930 bp · +
rpl32 · NC_067668.1 · 111,524–111,694 bp · +
trnL-UAG · NC_067668.1 · 112,460–112,539 bp · +
ccsA · NC_067668.1 · 112,628–113,599 bp · +
trnN-GUU · NC_067668.1 · 127,935–128,006 bp · +
rps7 · NC_067668.1 · 139,004–139,471 bp · +
ndhB · NC_067668.1 · 139,742–141,949 bp · +
trnL-CAA · NC_067668.1 · 142,521–142,601 bp · +
trnI-CAU · NC_067668.1 · 150,126–150,199 bp · +
rpl23 · NC_067668.1 · 150,365–150,646 bp · +
rpl2 · NC_067668.1 · 150,665–152,143 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon lungshengensis
ANNOTATED PLASTOME
NC_067668.1
152,253 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38063 76126 114190 152253 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK OOC29_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 397 1455 1059 Locate
trnK-UUU gene − 1687 4267 2581 Locate
matK gene − 2007 3527 1521 Locate
OOC29_pgp086 gene − 4794 5939 1146 Locate
trnQ-UUG gene − 6885 6956 72 Locate
psbK gene + 7350 7535 186 Locate
psbI gene + 7923 8033 111 Locate
trnS-GCU gene − 8190 8277 88 Locate
trnG-UCC gene + 9039 9798 760 Locate
trnR-UCU gene + 9989 10060 72 Locate
atpA gene − 10164 11687 1524 Locate
atpF gene − 11796 13042 1247 Locate
atpH gene − 13334 13579 246 Locate
atpI gene − 14580 15323 744 Locate
rps2 gene − 15554 16264 711 Locate
rpoC2 gene − 16482 20663 4182 Locate
rpoC1 gene − 20828 23661 2834 Locate
rpoB gene − 23688 26900 3213 Locate
trnC-GCA gene + 28089 28159 71 Locate
petN gene + 28322 28411 90 Locate
psbM gene − 28938 29042 105 Locate
trnD-GUC gene − 29553 29626 74 Locate
trnY-GUA gene − 29737 29820 84 Locate
trnE-UUC gene − 29898 29970 73 Locate
trnT-GGU gene + 30580 30651 72 Locate
psbD gene + 31969 33030 1062 Locate
psbC gene + 32978 34399 1422 Locate
trnS-UGA gene − 34637 34729 93 Locate
psbZ gene + 35070 35258 189 Locate
trnG-GCC gene + 35503 35573 71 Locate
trnfM-CAU gene − 35761 35834 74 Locate
rps14 gene − 35980 36282 303 Locate
psaB gene − 36405 38609 2205 Locate
psaA gene − 38635 40887 2253 Locate
ycf3 gene − 41663 43610 1948 Locate
trnS-GGA gene + 44472 44558 87 Locate
rps4 gene − 44855 45460 606 Locate
trnT-UGU gene − 45842 45914 73 Locate
trnL-UAA gene + 46601 47165 565 Locate
trnF-GAA gene + 47459 47531 73 Locate
ndhJ gene − 48199 48675 477 Locate
ndhK gene − 48786 49463 678 Locate
ndhC gene − 49515 49877 363 Locate
trnV-UAC gene − 50834 51489 656 Locate
trnM-CAU gene + 51670 51742 73 Locate
atpE gene − 51943 52344 402 Locate
atpB gene − 52341 53837 1497 Locate
rbcL gene + 54628 56061 1434 Locate
accD gene + 56766 58247 1482 Locate
psaI gene + 58948 59058 111 Locate
ycf4 gene + 59506 60060 555 Locate
cemA gene + 60651 61340 690 Locate
petA gene + 61555 62517 963 Locate
psbJ gene − 63555 63677 123 Locate
psbL gene − 63812 63928 117 Locate
psbF gene − 63952 64071 120 Locate
psbE gene − 64086 64337 252 Locate
petL gene + 65229 65324 96 Locate
petG gene + 65499 65612 114 Locate
trnW-CCA gene − 65735 65808 74 Locate
trnP-UGG gene − 65977 66050 74 Locate
psaJ gene + 66332 66466 135 Locate
rpl33 gene + 66990 67190 201 Locate
rps18 gene + 67357 67662 306 Locate
rpl20 gene − 67897 68283 387 Locate
rps12 gene − 69016 69129 114 Locate
clpP gene − 69248 71183 1936 Locate
psbB gene + 71656 73182 1527 Locate
psbT gene + 73367 73468 102 Locate
psbN gene − 73534 73665 132 Locate
psbH gene + 73771 73989 219 Locate
petB gene + 74115 75481 1367 Locate
petD gene + 75670 76862 1193 Locate
rpoA gene − 77039 78046 1008 Locate
rps11 gene − 78118 78534 417 Locate
rpl36 gene − 78650 78763 114 Locate
infA gene − 78859 79092 234 Locate
rps8 gene − 79219 79623 405 Locate
rpl14 gene − 79806 80174 369 Locate
rpl16 gene − 80308 81575 1268 Locate
rps3 gene − 81719 82381 663 Locate
rpl22 gene − 82366 82839 474 Locate
rps19 gene − 82904 83182 279 Locate
rpl2 gene − 83250 84728 1479 Locate
rpl23 gene − 84747 85028 282 Locate
trnI-CAU gene − 85194 85267 74 Locate
ycf2 gene + 85362 92192 6831 Locate
ycf15 gene + 92382 92531 150 Locate
trnL-CAA gene − 92792 92872 81 Locate
ndhB gene − 93444 95651 2208 Locate
rps7 gene − 95922 96389 468 Locate
rps12 gene − 96443 97235 793 Locate
trnV-GAC gene + 98897 98968 72 Locate
rrn16 gene + 99195 100685 1491 Locate
trnI-GAU gene + 100983 102001 1019 Locate
trnA-UGC gene + 102066 102944 879 Locate
rrn23 gene + 103116 105926 2811 Locate
rrn4.5 gene + 106025 106127 103 Locate
rrn5 gene + 106383 106503 121 Locate
trnR-ACG gene + 106747 106820 74 Locate
trnN-GUU gene − 107387 107458 72 Locate
ycf1 gene + 107800 108930 1131 Locate
ndhF gene − 108824 111055 2232 Locate
rpl32 gene + 111524 111694 171 Locate
trnL-UAG gene + 112460 112539 80 Locate
ccsA gene + 112628 113599 972 Locate
ndhD gene − 113832 115361 1530 Locate
psaC gene − 115452 115697 246 Locate
ndhE gene − 115953 116258 306 Locate
ndhG gene − 116473 117003 531 Locate
ndhI gene − 117362 117868 507 Locate
ndhA gene − 117949 120071 2123 Locate
ndhH gene − 120073 121254 1182 Locate
rps15 gene − 121369 121641 273 Locate
ycf1 gene − 122071 127593 5523 Locate
trnN-GUU gene + 127935 128006 72 Locate
trnR-ACG gene − 128573 128646 74 Locate
rrn5 gene − 128890 129010 121 Locate
rrn4.5 gene − 129266 129368 103 Locate
rrn23 gene − 129467 132277 2811 Locate
trnA-UGC gene − 132449 133327 879 Locate
trnI-GAU gene − 133392 134410 1019 Locate
rrn16 gene − 134708 136198 1491 Locate
trnV-GAC gene − 136425 136496 72 Locate
rps12 gene + 138158 138950 793 Locate
rps7 gene + 139004 139471 468 Locate
ndhB gene + 139742 141949 2208 Locate
trnL-CAA gene + 142521 142601 81 Locate
ycf15 gene − 142862 143011 150 Locate
ycf2 gene − 143201 150031 6831 Locate
trnI-CAU gene + 150126 150199 74 Locate
rpl23 gene + 150365 150646 282 Locate
rpl2 gene + 150665 152143 1479 Locate
Status Available
Accession NC_067668.1
Length 152,253 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources