Isodon medilungensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067705.1 · 11–85 bp · −
psbA · NC_067705.1 · 393–1,451 bp · −
trnK-UUU · NC_067705.1 · 1,683–4,264 bp · −
matK · NC_067705.1 · 2,004–3,524 bp · −
ON850_pgp086 · NC_067705.1 · 4,792–5,937 bp · −
trnQ-UUG · NC_067705.1 · 6,883–6,954 bp · −
trnS-GCU · NC_067705.1 · 8,186–8,273 bp · −
atpA · NC_067705.1 · 10,160–11,683 bp · −
atpF · NC_067705.1 · 11,788–13,033 bp · −
atpH · NC_067705.1 · 13,325–13,570 bp · −
atpI · NC_067705.1 · 14,576–15,319 bp · −
rps2 · NC_067705.1 · 15,545–16,255 bp · −
rpoC2 · NC_067705.1 · 16,472–20,653 bp · −
rpoC1 · NC_067705.1 · 20,818–23,651 bp · −
rpoB · NC_067705.1 · 23,678–26,890 bp · −
psbM · NC_067705.1 · 29,401–29,505 bp · −
trnD-GUC · NC_067705.1 · 30,024–30,097 bp · −
trnY-GUA · NC_067705.1 · 30,208–30,291 bp · −
trnE-UUC · NC_067705.1 · 30,369–30,441 bp · −
trnS-UGA · NC_067705.1 · 35,107–35,199 bp · −
trnfM-CAU · NC_067705.1 · 36,230–36,303 bp · −
rps14 · NC_067705.1 · 36,449–36,751 bp · −
psaB · NC_067705.1 · 36,874–39,078 bp · −
psaA · NC_067705.1 · 39,104–41,356 bp · −
ycf3 · NC_067705.1 · 42,130–44,077 bp · −
rps4 · NC_067705.1 · 45,324–45,929 bp · −
trnT-UGU · NC_067705.1 · 46,354–46,426 bp · −
ndhJ · NC_067705.1 · 48,692–49,168 bp · −
ndhK · NC_067705.1 · 49,279–49,956 bp · −
ndhC · NC_067705.1 · 50,008–50,370 bp · −
trnV-UAC · NC_067705.1 · 51,347–52,002 bp · −
atpE · NC_067705.1 · 52,456–52,857 bp · −
atpB · NC_067705.1 · 52,854–54,350 bp · −
psbJ · NC_067705.1 · 64,068–64,190 bp · −
psbL · NC_067705.1 · 64,325–64,441 bp · −
psbF · NC_067705.1 · 64,465–64,584 bp · −
psbE · NC_067705.1 · 64,599–64,850 bp · −
trnW-CCA · NC_067705.1 · 66,249–66,322 bp · −
trnP-UGG · NC_067705.1 · 66,491–66,564 bp · −
rpl20 · NC_067705.1 · 68,342–68,728 bp · −
rps12 · NC_067705.1 · 69,461–69,574 bp · −
rps12 · NC_067705.1 · 96,904–97,696 bp · −
clpP · NC_067705.1 · 69,693–71,609 bp · −
psbN · NC_067705.1 · 73,960–74,091 bp · −
rpoA · NC_067705.1 · 77,500–78,507 bp · −
rps11 · NC_067705.1 · 78,579–78,995 bp · −
rpl36 · NC_067705.1 · 79,111–79,224 bp · −
infA · NC_067705.1 · 79,320–79,553 bp · −
rps8 · NC_067705.1 · 79,680–80,084 bp · −
rpl14 · NC_067705.1 · 80,267–80,635 bp · −
rpl16 · NC_067705.1 · 80,769–82,036 bp · −
rps3 · NC_067705.1 · 82,180–82,842 bp · −
rpl22 · NC_067705.1 · 82,827–83,300 bp · −
rps19 · NC_067705.1 · 83,365–83,643 bp · −
rpl2 · NC_067705.1 · 83,711–85,189 bp · −
rpl23 · NC_067705.1 · 85,208–85,489 bp · −
trnI-CAU · NC_067705.1 · 85,655–85,728 bp · −
trnL-CAA · NC_067705.1 · 93,253–93,333 bp · −
ndhB · NC_067705.1 · 93,905–96,112 bp · −
rps7 · NC_067705.1 · 96,383–96,850 bp · −
trnN-GUU · NC_067705.1 · 107,848–107,919 bp · −
ndhF · NC_067705.1 · 109,285–111,516 bp · −
ndhD · NC_067705.1 · 114,292–115,821 bp · −
psaC · NC_067705.1 · 115,912–116,157 bp · −
ndhE · NC_067705.1 · 116,413–116,718 bp · −
ndhG · NC_067705.1 · 116,933–117,463 bp · −
ndhI · NC_067705.1 · 117,822–118,328 bp · −
ndhA · NC_067705.1 · 118,409–120,532 bp · −
ndhH · NC_067705.1 · 120,534–121,715 bp · −
rps15 · NC_067705.1 · 121,830–122,102 bp · −
ycf1 · NC_067705.1 · 122,532–128,054 bp · −
trnR-ACG · NC_067705.1 · 129,034–129,107 bp · −
rrn5 · NC_067705.1 · 129,351–129,471 bp · −
rrn4.5 · NC_067705.1 · 129,727–129,829 bp · −
rrn23 · NC_067705.1 · 129,928–132,738 bp · −
trnA-UGC · NC_067705.1 · 132,910–133,788 bp · −
trnI-GAU · NC_067705.1 · 133,853–134,871 bp · −
rrn16 · NC_067705.1 · 135,169–136,659 bp · −
trnV-GAC · NC_067705.1 · 136,886–136,957 bp · −
ycf15 · NC_067705.1 · 143,323–143,472 bp · −
ycf2 · NC_067705.1 · 143,662–150,492 bp · −
psbK · NC_067705.1 · 7,348–7,533 bp · +
psbI · NC_067705.1 · 7,921–8,031 bp · +
trnG-UCC · NC_067705.1 · 9,035–9,794 bp · +
trnR-UCU · NC_067705.1 · 9,985–10,056 bp · +
trnC-GCA · NC_067705.1 · 28,086–28,156 bp · +
petN · NC_067705.1 · 28,319–28,408 bp · +
trnT-GGU · NC_067705.1 · 31,051–31,122 bp · +
psbD · NC_067705.1 · 32,440–33,501 bp · +
psbC · NC_067705.1 · 33,449–34,870 bp · +
psbZ · NC_067705.1 · 35,540–35,728 bp · +
trnG-GCC · NC_067705.1 · 35,973–36,043 bp · +
trnS-GGA · NC_067705.1 · 44,941–45,027 bp · +
trnL-UAA · NC_067705.1 · 47,115–47,658 bp · +
trnF-GAA · NC_067705.1 · 47,952–48,024 bp · +
trnM-CAU · NC_067705.1 · 52,183–52,255 bp · +
rbcL · NC_067705.1 · 55,141–56,574 bp · +
accD · NC_067705.1 · 57,279–58,760 bp · +
psaI · NC_067705.1 · 59,461–59,571 bp · +
ycf4 · NC_067705.1 · 60,018–60,572 bp · +
cemA · NC_067705.1 · 61,164–61,853 bp · +
petA · NC_067705.1 · 62,068–63,030 bp · +
petL · NC_067705.1 · 65,743–65,838 bp · +
petG · NC_067705.1 · 66,013–66,126 bp · +
psaJ · NC_067705.1 · 66,846–66,980 bp · +
rpl33 · NC_067705.1 · 67,435–67,635 bp · +
rps18 · NC_067705.1 · 67,802–68,107 bp · +
rps12 · NC_067705.1 · 138,619–139,411 bp · +
psbB · NC_067705.1 · 72,082–73,608 bp · +
psbT · NC_067705.1 · 73,793–73,894 bp · +
psbH · NC_067705.1 · 74,197–74,415 bp · +
petB · NC_067705.1 · 74,541–75,906 bp · +
petD · NC_067705.1 · 76,095–77,287 bp · +
ycf2 · NC_067705.1 · 85,823–92,653 bp · +
ycf15 · NC_067705.1 · 92,843–92,992 bp · +
trnV-GAC · NC_067705.1 · 99,358–99,429 bp · +
rrn16 · NC_067705.1 · 99,656–101,146 bp · +
trnI-GAU · NC_067705.1 · 101,444–102,462 bp · +
trnA-UGC · NC_067705.1 · 102,527–103,405 bp · +
rrn23 · NC_067705.1 · 103,577–106,387 bp · +
rrn4.5 · NC_067705.1 · 106,486–106,588 bp · +
rrn5 · NC_067705.1 · 106,844–106,964 bp · +
trnR-ACG · NC_067705.1 · 107,208–107,281 bp · +
ycf1 · NC_067705.1 · 108,261–109,391 bp · +
rpl32 · NC_067705.1 · 111,986–112,156 bp · +
trnL-UAG · NC_067705.1 · 112,921–113,000 bp · +
ccsA · NC_067705.1 · 113,089–114,060 bp · +
trnN-GUU · NC_067705.1 · 128,396–128,467 bp · +
rps7 · NC_067705.1 · 139,465–139,932 bp · +
ndhB · NC_067705.1 · 140,203–142,410 bp · +
trnL-CAA · NC_067705.1 · 142,982–143,062 bp · +
trnI-CAU · NC_067705.1 · 150,587–150,660 bp · +
rpl23 · NC_067705.1 · 150,826–151,107 bp · +
rpl2 · NC_067705.1 · 151,126–152,604 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon medilungensis
ANNOTATED PLASTOME
NC_067705.1
152,714 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38178 76357 114536 152714 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK ON850_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1683 4264 2582 Locate
matK gene − 2004 3524 1521 Locate
ON850_pgp086 gene − 4792 5937 1146 Locate
trnQ-UUG gene − 6883 6954 72 Locate
psbK gene + 7348 7533 186 Locate
psbI gene + 7921 8031 111 Locate
trnS-GCU gene − 8186 8273 88 Locate
trnG-UCC gene + 9035 9794 760 Locate
trnR-UCU gene + 9985 10056 72 Locate
atpA gene − 10160 11683 1524 Locate
atpF gene − 11788 13033 1246 Locate
atpH gene − 13325 13570 246 Locate
atpI gene − 14576 15319 744 Locate
rps2 gene − 15545 16255 711 Locate
rpoC2 gene − 16472 20653 4182 Locate
rpoC1 gene − 20818 23651 2834 Locate
rpoB gene − 23678 26890 3213 Locate
trnC-GCA gene + 28086 28156 71 Locate
petN gene + 28319 28408 90 Locate
psbM gene − 29401 29505 105 Locate
trnD-GUC gene − 30024 30097 74 Locate
trnY-GUA gene − 30208 30291 84 Locate
trnE-UUC gene − 30369 30441 73 Locate
trnT-GGU gene + 31051 31122 72 Locate
psbD gene + 32440 33501 1062 Locate
psbC gene + 33449 34870 1422 Locate
trnS-UGA gene − 35107 35199 93 Locate
psbZ gene + 35540 35728 189 Locate
trnG-GCC gene + 35973 36043 71 Locate
trnfM-CAU gene − 36230 36303 74 Locate
rps14 gene − 36449 36751 303 Locate
psaB gene − 36874 39078 2205 Locate
psaA gene − 39104 41356 2253 Locate
ycf3 gene − 42130 44077 1948 Locate
trnS-GGA gene + 44941 45027 87 Locate
rps4 gene − 45324 45929 606 Locate
trnT-UGU gene − 46354 46426 73 Locate
trnL-UAA gene + 47115 47658 544 Locate
trnF-GAA gene + 47952 48024 73 Locate
ndhJ gene − 48692 49168 477 Locate
ndhK gene − 49279 49956 678 Locate
ndhC gene − 50008 50370 363 Locate
trnV-UAC gene − 51347 52002 656 Locate
trnM-CAU gene + 52183 52255 73 Locate
atpE gene − 52456 52857 402 Locate
atpB gene − 52854 54350 1497 Locate
rbcL gene + 55141 56574 1434 Locate
accD gene + 57279 58760 1482 Locate
psaI gene + 59461 59571 111 Locate
ycf4 gene + 60018 60572 555 Locate
cemA gene + 61164 61853 690 Locate
petA gene + 62068 63030 963 Locate
psbJ gene − 64068 64190 123 Locate
psbL gene − 64325 64441 117 Locate
psbF gene − 64465 64584 120 Locate
psbE gene − 64599 64850 252 Locate
petL gene + 65743 65838 96 Locate
petG gene + 66013 66126 114 Locate
trnW-CCA gene − 66249 66322 74 Locate
trnP-UGG gene − 66491 66564 74 Locate
psaJ gene + 66846 66980 135 Locate
rpl33 gene + 67435 67635 201 Locate
rps18 gene + 67802 68107 306 Locate
rpl20 gene − 68342 68728 387 Locate
rps12 gene − 69461 69574 114 Locate
clpP gene − 69693 71609 1917 Locate
psbB gene + 72082 73608 1527 Locate
psbT gene + 73793 73894 102 Locate
psbN gene − 73960 74091 132 Locate
psbH gene + 74197 74415 219 Locate
petB gene + 74541 75906 1366 Locate
petD gene + 76095 77287 1193 Locate
rpoA gene − 77500 78507 1008 Locate
rps11 gene − 78579 78995 417 Locate
rpl36 gene − 79111 79224 114 Locate
infA gene − 79320 79553 234 Locate
rps8 gene − 79680 80084 405 Locate
rpl14 gene − 80267 80635 369 Locate
rpl16 gene − 80769 82036 1268 Locate
rps3 gene − 82180 82842 663 Locate
rpl22 gene − 82827 83300 474 Locate
rps19 gene − 83365 83643 279 Locate
rpl2 gene − 83711 85189 1479 Locate
rpl23 gene − 85208 85489 282 Locate
trnI-CAU gene − 85655 85728 74 Locate
ycf2 gene + 85823 92653 6831 Locate
ycf15 gene + 92843 92992 150 Locate
trnL-CAA gene − 93253 93333 81 Locate
ndhB gene − 93905 96112 2208 Locate
rps7 gene − 96383 96850 468 Locate
rps12 gene − 96904 97696 793 Locate
trnV-GAC gene + 99358 99429 72 Locate
rrn16 gene + 99656 101146 1491 Locate
trnI-GAU gene + 101444 102462 1019 Locate
trnA-UGC gene + 102527 103405 879 Locate
rrn23 gene + 103577 106387 2811 Locate
rrn4.5 gene + 106486 106588 103 Locate
rrn5 gene + 106844 106964 121 Locate
trnR-ACG gene + 107208 107281 74 Locate
trnN-GUU gene − 107848 107919 72 Locate
ycf1 gene + 108261 109391 1131 Locate
ndhF gene − 109285 111516 2232 Locate
rpl32 gene + 111986 112156 171 Locate
trnL-UAG gene + 112921 113000 80 Locate
ccsA gene + 113089 114060 972 Locate
ndhD gene − 114292 115821 1530 Locate
psaC gene − 115912 116157 246 Locate
ndhE gene − 116413 116718 306 Locate
ndhG gene − 116933 117463 531 Locate
ndhI gene − 117822 118328 507 Locate
ndhA gene − 118409 120532 2124 Locate
ndhH gene − 120534 121715 1182 Locate
rps15 gene − 121830 122102 273 Locate
ycf1 gene − 122532 128054 5523 Locate
trnN-GUU gene + 128396 128467 72 Locate
trnR-ACG gene − 129034 129107 74 Locate
rrn5 gene − 129351 129471 121 Locate
rrn4.5 gene − 129727 129829 103 Locate
rrn23 gene − 129928 132738 2811 Locate
trnA-UGC gene − 132910 133788 879 Locate
trnI-GAU gene − 133853 134871 1019 Locate
rrn16 gene − 135169 136659 1491 Locate
trnV-GAC gene − 136886 136957 72 Locate
rps12 gene + 138619 139411 793 Locate
rps7 gene + 139465 139932 468 Locate
ndhB gene + 140203 142410 2208 Locate
trnL-CAA gene + 142982 143062 81 Locate
ycf15 gene − 143323 143472 150 Locate
ycf2 gene − 143662 150492 6831 Locate
trnI-CAU gene + 150587 150660 74 Locate
rpl23 gene + 150826 151107 282 Locate
rpl2 gene + 151126 152604 1479 Locate
Status Available
Accession NC_067705.1
Length 152,714 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources