Isodon muliensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067700.1 · 11–85 bp · −
psbA · NC_067700.1 · 347–1,405 bp · −
trnK-UUU · NC_067700.1 · 1,637–4,217 bp · −
matK · NC_067700.1 · 1,957–3,477 bp · −
OOA39_pgp086 · NC_067700.1 · 4,743–5,888 bp · −
trnQ-UUG · NC_067700.1 · 6,850–6,921 bp · −
trnS-GCU · NC_067700.1 · 8,154–8,241 bp · −
atpA · NC_067700.1 · 10,136–11,659 bp · −
atpF · NC_067700.1 · 11,770–13,016 bp · −
atpH · NC_067700.1 · 13,308–13,553 bp · −
atpI · NC_067700.1 · 14,554–15,297 bp · −
rps2 · NC_067700.1 · 15,523–16,233 bp · −
rpoC2 · NC_067700.1 · 16,450–20,631 bp · −
rpoC1 · NC_067700.1 · 20,796–23,629 bp · −
rpoB · NC_067700.1 · 23,656–26,868 bp · −
psbM · NC_067700.1 · 29,365–29,469 bp · −
trnD-GUC · NC_067700.1 · 29,988–30,061 bp · −
trnY-GUA · NC_067700.1 · 30,172–30,255 bp · −
trnE-UUC · NC_067700.1 · 30,333–30,405 bp · −
trnS-UGA · NC_067700.1 · 35,072–35,164 bp · −
trnfM-CAU · NC_067700.1 · 36,199–36,272 bp · −
rps14 · NC_067700.1 · 36,418–36,720 bp · −
psaB · NC_067700.1 · 36,843–39,047 bp · −
psaA · NC_067700.1 · 39,073–41,325 bp · −
ycf3 · NC_067700.1 · 42,098–44,044 bp · −
rps4 · NC_067700.1 · 45,291–45,896 bp · −
trnT-UGU · NC_067700.1 · 46,321–46,393 bp · −
ndhJ · NC_067700.1 · 48,678–49,154 bp · −
ndhK · NC_067700.1 · 49,301–49,942 bp · −
ndhC · NC_067700.1 · 49,994–50,356 bp · −
trnV-UAC · NC_067700.1 · 51,313–51,968 bp · −
atpE · NC_067700.1 · 52,422–52,823 bp · −
atpB · NC_067700.1 · 52,820–54,316 bp · −
psbJ · NC_067700.1 · 64,041–64,163 bp · −
psbL · NC_067700.1 · 64,298–64,414 bp · −
psbF · NC_067700.1 · 64,438–64,557 bp · −
psbE · NC_067700.1 · 64,572–64,823 bp · −
trnW-CCA · NC_067700.1 · 66,222–66,295 bp · −
trnP-UGG · NC_067700.1 · 66,464–66,537 bp · −
rpl20 · NC_067700.1 · 68,329–68,715 bp · −
rps12 · NC_067700.1 · 69,448–69,561 bp · −
rps12 · NC_067700.1 · 96,857–97,649 bp · −
clpP · NC_067700.1 · 69,680–71,595 bp · −
psbN · NC_067700.1 · 73,947–74,078 bp · −
rpoA · NC_067700.1 · 77,453–78,460 bp · −
rps11 · NC_067700.1 · 78,532–78,948 bp · −
rpl36 · NC_067700.1 · 79,064–79,177 bp · −
infA · NC_067700.1 · 79,273–79,506 bp · −
rps8 · NC_067700.1 · 79,633–80,037 bp · −
rpl14 · NC_067700.1 · 80,220–80,588 bp · −
rpl16 · NC_067700.1 · 80,722–81,989 bp · −
rps3 · NC_067700.1 · 82,133–82,795 bp · −
rpl22 · NC_067700.1 · 82,780–83,253 bp · −
rps19 · NC_067700.1 · 83,318–83,596 bp · −
rpl2 · NC_067700.1 · 83,664–85,142 bp · −
rpl23 · NC_067700.1 · 85,161–85,442 bp · −
trnI-CAU · NC_067700.1 · 85,608–85,681 bp · −
trnL-CAA · NC_067700.1 · 93,206–93,286 bp · −
ndhB · NC_067700.1 · 93,858–96,065 bp · −
rps7 · NC_067700.1 · 96,336–96,803 bp · −
trnN-GUU · NC_067700.1 · 107,801–107,872 bp · −
ndhF · NC_067700.1 · 109,238–111,469 bp · −
ndhD · NC_067700.1 · 114,279–115,808 bp · −
psaC · NC_067700.1 · 115,899–116,144 bp · −
ndhE · NC_067700.1 · 116,400–116,705 bp · −
ndhG · NC_067700.1 · 116,920–117,450 bp · −
ndhI · NC_067700.1 · 117,809–118,315 bp · −
ndhA · NC_067700.1 · 118,396–120,519 bp · −
ndhH · NC_067700.1 · 120,521–121,702 bp · −
rps15 · NC_067700.1 · 121,817–122,089 bp · −
ycf1 · NC_067700.1 · 122,519–128,035 bp · −
trnR-ACG · NC_067700.1 · 129,015–129,088 bp · −
rrn5 · NC_067700.1 · 129,332–129,452 bp · −
rrn4.5 · NC_067700.1 · 129,708–129,810 bp · −
rrn23 · NC_067700.1 · 129,909–132,719 bp · −
trnA-UGC · NC_067700.1 · 132,891–133,769 bp · −
trnI-GAU · NC_067700.1 · 133,834–134,852 bp · −
rrn16 · NC_067700.1 · 135,150–136,640 bp · −
trnV-GAC · NC_067700.1 · 136,867–136,938 bp · −
ycf15 · NC_067700.1 · 143,304–143,453 bp · −
ycf2 · NC_067700.1 · 143,643–150,473 bp · −
psbK · NC_067700.1 · 7,315–7,500 bp · +
psbI · NC_067700.1 · 7,887–7,997 bp · +
trnG-UCC · NC_067700.1 · 9,011–9,770 bp · +
trnR-UCU · NC_067700.1 · 9,961–10,032 bp · +
trnC-GCA · NC_067700.1 · 28,051–28,121 bp · +
petN · NC_067700.1 · 28,284–28,373 bp · +
trnT-GGU · NC_067700.1 · 31,017–31,088 bp · +
psbD · NC_067700.1 · 32,406–33,467 bp · +
psbC · NC_067700.1 · 33,415–34,836 bp · +
psbZ · NC_067700.1 · 35,505–35,693 bp · +
trnG-GCC · NC_067700.1 · 35,939–36,009 bp · +
trnS-GGA · NC_067700.1 · 44,908–44,994 bp · +
trnL-UAA · NC_067700.1 · 47,080–47,644 bp · +
trnF-GAA · NC_067700.1 · 47,938–48,010 bp · +
trnM-CAU · NC_067700.1 · 52,149–52,221 bp · +
rbcL · NC_067700.1 · 55,108–56,541 bp · +
accD · NC_067700.1 · 57,245–58,726 bp · +
psaI · NC_067700.1 · 59,434–59,544 bp · +
ycf4 · NC_067700.1 · 59,991–60,545 bp · +
cemA · NC_067700.1 · 61,136–61,825 bp · +
petA · NC_067700.1 · 62,040–63,002 bp · +
petL · NC_067700.1 · 65,716–65,811 bp · +
petG · NC_067700.1 · 65,986–66,099 bp · +
psaJ · NC_067700.1 · 66,824–66,958 bp · +
rpl33 · NC_067700.1 · 67,421–67,621 bp · +
rps18 · NC_067700.1 · 67,788–68,093 bp · +
rps12 · NC_067700.1 · 138,600–139,392 bp · +
psbB · NC_067700.1 · 72,068–73,594 bp · +
psbT · NC_067700.1 · 73,780–73,881 bp · +
psbH · NC_067700.1 · 74,184–74,402 bp · +
petB · NC_067700.1 · 74,528–75,895 bp · +
petD · NC_067700.1 · 76,084–77,276 bp · +
ycf2 · NC_067700.1 · 85,776–92,606 bp · +
ycf15 · NC_067700.1 · 92,796–92,945 bp · +
trnV-GAC · NC_067700.1 · 99,311–99,382 bp · +
rrn16 · NC_067700.1 · 99,609–101,099 bp · +
trnI-GAU · NC_067700.1 · 101,397–102,415 bp · +
trnA-UGC · NC_067700.1 · 102,480–103,358 bp · +
rrn23 · NC_067700.1 · 103,530–106,340 bp · +
rrn4.5 · NC_067700.1 · 106,439–106,541 bp · +
rrn5 · NC_067700.1 · 106,797–106,917 bp · +
trnR-ACG · NC_067700.1 · 107,161–107,234 bp · +
ycf1 · NC_067700.1 · 108,214–109,344 bp · +
rpl32 · NC_067700.1 · 111,945–112,115 bp · +
trnL-UAG · NC_067700.1 · 112,880–112,959 bp · +
ccsA · NC_067700.1 · 113,048–114,019 bp · +
trnN-GUU · NC_067700.1 · 128,377–128,448 bp · +
rps7 · NC_067700.1 · 139,446–139,913 bp · +
ndhB · NC_067700.1 · 140,184–142,391 bp · +
trnL-CAA · NC_067700.1 · 142,963–143,043 bp · +
trnI-CAU · NC_067700.1 · 150,568–150,641 bp · +
rpl23 · NC_067700.1 · 150,807–151,088 bp · +
rpl2 · NC_067700.1 · 151,107–152,585 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon muliensis
ANNOTATED PLASTOME
NC_067700.1
152,695 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38174 76348 114521 152695 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK OOA39_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 347 1405 1059 Locate
trnK-UUU gene − 1637 4217 2581 Locate
matK gene − 1957 3477 1521 Locate
OOA39_pgp086 gene − 4743 5888 1146 Locate
trnQ-UUG gene − 6850 6921 72 Locate
psbK gene + 7315 7500 186 Locate
psbI gene + 7887 7997 111 Locate
trnS-GCU gene − 8154 8241 88 Locate
trnG-UCC gene + 9011 9770 760 Locate
trnR-UCU gene + 9961 10032 72 Locate
atpA gene − 10136 11659 1524 Locate
atpF gene − 11770 13016 1247 Locate
atpH gene − 13308 13553 246 Locate
atpI gene − 14554 15297 744 Locate
rps2 gene − 15523 16233 711 Locate
rpoC2 gene − 16450 20631 4182 Locate
rpoC1 gene − 20796 23629 2834 Locate
rpoB gene − 23656 26868 3213 Locate
trnC-GCA gene + 28051 28121 71 Locate
petN gene + 28284 28373 90 Locate
psbM gene − 29365 29469 105 Locate
trnD-GUC gene − 29988 30061 74 Locate
trnY-GUA gene − 30172 30255 84 Locate
trnE-UUC gene − 30333 30405 73 Locate
trnT-GGU gene + 31017 31088 72 Locate
psbD gene + 32406 33467 1062 Locate
psbC gene + 33415 34836 1422 Locate
trnS-UGA gene − 35072 35164 93 Locate
psbZ gene + 35505 35693 189 Locate
trnG-GCC gene + 35939 36009 71 Locate
trnfM-CAU gene − 36199 36272 74 Locate
rps14 gene − 36418 36720 303 Locate
psaB gene − 36843 39047 2205 Locate
psaA gene − 39073 41325 2253 Locate
ycf3 gene − 42098 44044 1947 Locate
trnS-GGA gene + 44908 44994 87 Locate
rps4 gene − 45291 45896 606 Locate
trnT-UGU gene − 46321 46393 73 Locate
trnL-UAA gene + 47080 47644 565 Locate
trnF-GAA gene + 47938 48010 73 Locate
ndhJ gene − 48678 49154 477 Locate
ndhK gene − 49301 49942 642 Locate
ndhC gene − 49994 50356 363 Locate
trnV-UAC gene − 51313 51968 656 Locate
trnM-CAU gene + 52149 52221 73 Locate
atpE gene − 52422 52823 402 Locate
atpB gene − 52820 54316 1497 Locate
rbcL gene + 55108 56541 1434 Locate
accD gene + 57245 58726 1482 Locate
psaI gene + 59434 59544 111 Locate
ycf4 gene + 59991 60545 555 Locate
cemA gene + 61136 61825 690 Locate
petA gene + 62040 63002 963 Locate
psbJ gene − 64041 64163 123 Locate
psbL gene − 64298 64414 117 Locate
psbF gene − 64438 64557 120 Locate
psbE gene − 64572 64823 252 Locate
petL gene + 65716 65811 96 Locate
petG gene + 65986 66099 114 Locate
trnW-CCA gene − 66222 66295 74 Locate
trnP-UGG gene − 66464 66537 74 Locate
psaJ gene + 66824 66958 135 Locate
rpl33 gene + 67421 67621 201 Locate
rps18 gene + 67788 68093 306 Locate
rpl20 gene − 68329 68715 387 Locate
rps12 gene − 69448 69561 114 Locate
clpP gene − 69680 71595 1916 Locate
psbB gene + 72068 73594 1527 Locate
psbT gene + 73780 73881 102 Locate
psbN gene − 73947 74078 132 Locate
psbH gene + 74184 74402 219 Locate
petB gene + 74528 75895 1368 Locate
petD gene + 76084 77276 1193 Locate
rpoA gene − 77453 78460 1008 Locate
rps11 gene − 78532 78948 417 Locate
rpl36 gene − 79064 79177 114 Locate
infA gene − 79273 79506 234 Locate
rps8 gene − 79633 80037 405 Locate
rpl14 gene − 80220 80588 369 Locate
rpl16 gene − 80722 81989 1268 Locate
rps3 gene − 82133 82795 663 Locate
rpl22 gene − 82780 83253 474 Locate
rps19 gene − 83318 83596 279 Locate
rpl2 gene − 83664 85142 1479 Locate
rpl23 gene − 85161 85442 282 Locate
trnI-CAU gene − 85608 85681 74 Locate
ycf2 gene + 85776 92606 6831 Locate
ycf15 gene + 92796 92945 150 Locate
trnL-CAA gene − 93206 93286 81 Locate
ndhB gene − 93858 96065 2208 Locate
rps7 gene − 96336 96803 468 Locate
rps12 gene − 96857 97649 793 Locate
trnV-GAC gene + 99311 99382 72 Locate
rrn16 gene + 99609 101099 1491 Locate
trnI-GAU gene + 101397 102415 1019 Locate
trnA-UGC gene + 102480 103358 879 Locate
rrn23 gene + 103530 106340 2811 Locate
rrn4.5 gene + 106439 106541 103 Locate
rrn5 gene + 106797 106917 121 Locate
trnR-ACG gene + 107161 107234 74 Locate
trnN-GUU gene − 107801 107872 72 Locate
ycf1 gene + 108214 109344 1131 Locate
ndhF gene − 109238 111469 2232 Locate
rpl32 gene + 111945 112115 171 Locate
trnL-UAG gene + 112880 112959 80 Locate
ccsA gene + 113048 114019 972 Locate
ndhD gene − 114279 115808 1530 Locate
psaC gene − 115899 116144 246 Locate
ndhE gene − 116400 116705 306 Locate
ndhG gene − 116920 117450 531 Locate
ndhI gene − 117809 118315 507 Locate
ndhA gene − 118396 120519 2124 Locate
ndhH gene − 120521 121702 1182 Locate
rps15 gene − 121817 122089 273 Locate
ycf1 gene − 122519 128035 5517 Locate
trnN-GUU gene + 128377 128448 72 Locate
trnR-ACG gene − 129015 129088 74 Locate
rrn5 gene − 129332 129452 121 Locate
rrn4.5 gene − 129708 129810 103 Locate
rrn23 gene − 129909 132719 2811 Locate
trnA-UGC gene − 132891 133769 879 Locate
trnI-GAU gene − 133834 134852 1019 Locate
rrn16 gene − 135150 136640 1491 Locate
trnV-GAC gene − 136867 136938 72 Locate
rps12 gene + 138600 139392 793 Locate
rps7 gene + 139446 139913 468 Locate
ndhB gene + 140184 142391 2208 Locate
trnL-CAA gene + 142963 143043 81 Locate
ycf15 gene − 143304 143453 150 Locate
ycf2 gene − 143643 150473 6831 Locate
trnI-CAU gene + 150568 150641 74 Locate
rpl23 gene + 150807 151088 282 Locate
rpl2 gene + 151107 152585 1479 Locate
Status Available
Accession NC_067700.1
Length 152,695 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources