Isodon nervosus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_058575.1 · 11–84 bp · −
psbA · NC_058575.1 · 393–1,451 bp · −
trnK-UUU · NC_058575.1 · 1,683–4,263 bp · −
matK · NC_058575.1 · 2,003–3,523 bp · −
rps16 · NC_058575.1 · 4,788–5,933 bp · −
trnQ-UUG · NC_058575.1 · 6,878–6,949 bp · −
trnS-GCU · NC_058575.1 · 8,182–8,269 bp · −
atpA · NC_058575.1 · 10,156–11,679 bp · −
atpF · NC_058575.1 · 11,789–13,034 bp · −
atpH · NC_058575.1 · 13,326–13,571 bp · −
atpI · NC_058575.1 · 14,573–15,316 bp · −
rps2 · NC_058575.1 · 15,543–16,253 bp · −
rpoC2 · NC_058575.1 · 16,470–20,651 bp · −
rpoC1 · NC_058575.1 · 20,816–23,649 bp · −
rpoB · NC_058575.1 · 23,676–26,888 bp · −
psbM · NC_058575.1 · 29,393–29,497 bp · −
trnD-GUC · NC_058575.1 · 30,016–30,089 bp · −
trnY-GUA · NC_058575.1 · 30,200–30,283 bp · −
trnE-UUC · NC_058575.1 · 30,361–30,433 bp · −
trnS-UGA · NC_058575.1 · 35,098–35,190 bp · −
trnfM-CAU · NC_058575.1 · 36,225–36,298 bp · −
rps14 · NC_058575.1 · 36,444–36,746 bp · −
psaB · NC_058575.1 · 36,869–39,073 bp · −
psaA · NC_058575.1 · 39,099–41,351 bp · −
ycf3 · NC_058575.1 · 42,125–44,072 bp · −
rps4 · NC_058575.1 · 45,319–45,924 bp · −
trnT-UGU · NC_058575.1 · 46,338–46,410 bp · −
ndhJ · NC_058575.1 · 48,695–49,171 bp · −
ndhK · NC_058575.1 · 49,282–49,959 bp · −
ndhC · NC_058575.1 · 50,011–50,373 bp · −
trnV-UAC · NC_058575.1 · 51,336–51,992 bp · −
atpE · NC_058575.1 · 52,446–52,847 bp · −
atpB · NC_058575.1 · 52,844–54,340 bp · −
psbJ · NC_058575.1 · 64,058–64,180 bp · −
psbL · NC_058575.1 · 64,315–64,431 bp · −
psbF · NC_058575.1 · 64,455–64,574 bp · −
psbE · NC_058575.1 · 64,589–64,840 bp · −
trnW-CCA · NC_058575.1 · 66,239–66,312 bp · −
trnP-UGG · NC_058575.1 · 66,481–66,554 bp · −
rpl20 · NC_058575.1 · 68,339–68,725 bp · −
rps12 · NC_058575.1 · 69,457–69,570 bp · −
rps12 · NC_058575.1 · 96,863–97,655 bp · −
clpP · NC_058575.1 · 69,689–71,604 bp · −
psbN · NC_058575.1 · 73,954–74,085 bp · −
rpoA · NC_058575.1 · 77,459–78,466 bp · −
rps11 · NC_058575.1 · 78,538–78,954 bp · −
rpl36 · NC_058575.1 · 79,070–79,183 bp · −
infA · NC_058575.1 · 79,279–79,512 bp · −
rps8 · NC_058575.1 · 79,639–80,043 bp · −
rpl14 · NC_058575.1 · 80,226–80,594 bp · −
rpl16 · NC_058575.1 · 80,728–81,995 bp · −
rps3 · NC_058575.1 · 82,139–82,801 bp · −
rpl22 · NC_058575.1 · 82,786–83,259 bp · −
rps19 · NC_058575.1 · 83,324–83,602 bp · −
rpl2 · NC_058575.1 · 83,670–85,148 bp · −
rpl23 · NC_058575.1 · 85,167–85,448 bp · −
trnI-CAU · NC_058575.1 · 85,614–85,687 bp · −
trnL-CAA · NC_058575.1 · 93,212–93,292 bp · −
ndhB · NC_058575.1 · 93,864–96,071 bp · −
rps7 · NC_058575.1 · 96,342–96,809 bp · −
trnN-GUU · NC_058575.1 · 107,803–107,874 bp · −
ndhF · NC_058575.1 · 109,240–111,471 bp · −
ndhD · NC_058575.1 · 114,247–115,776 bp · −
psaC · NC_058575.1 · 115,867–116,112 bp · −
ndhE · NC_058575.1 · 116,368–116,673 bp · −
ndhG · NC_058575.1 · 116,888–117,418 bp · −
ndhI · NC_058575.1 · 117,777–118,283 bp · −
ndhA · NC_058575.1 · 118,364–120,486 bp · −
ndhH · NC_058575.1 · 120,488–121,669 bp · −
rps15 · NC_058575.1 · 121,784–122,056 bp · −
ycf1 · NC_058575.1 · 122,491–128,013 bp · −
trnR-ACG · NC_058575.1 · 128,989–129,062 bp · −
rrn5 · NC_058575.1 · 129,306–129,426 bp · −
rrn4.5 · NC_058575.1 · 129,682–129,784 bp · −
rrn23 · NC_058575.1 · 129,883–132,693 bp · −
trnA-UGC · NC_058575.1 · 132,865–133,743 bp · −
trnI-GAU · NC_058575.1 · 133,808–134,826 bp · −
rrn16 · NC_058575.1 · 135,124–136,614 bp · −
trnV-GAC · NC_058575.1 · 136,841–136,912 bp · −
ycf15 · NC_058575.1 · 143,278–143,427 bp · −
ycf2 · NC_058575.1 · 143,617–150,447 bp · −
psbK · NC_058575.1 · 7,343–7,528 bp · +
psbI · NC_058575.1 · 7,916–8,026 bp · +
trnG · NC_058575.1 · 9,031–9,789 bp · +
trnR-UCU · NC_058575.1 · 9,981–10,052 bp · +
trnC-GCA · NC_058575.1 · 28,078–28,148 bp · +
petN · NC_058575.1 · 28,311–28,400 bp · +
trnT-GGU · NC_058575.1 · 31,043–31,114 bp · +
psbD · NC_058575.1 · 32,432–33,493 bp · +
psbC · NC_058575.1 · 33,441–34,862 bp · +
psbZ · NC_058575.1 · 35,531–35,719 bp · +
trnG-GCC · NC_058575.1 · 35,964–36,034 bp · +
trnS-GGA · NC_058575.1 · 44,936–45,022 bp · +
trnL-UAA · NC_058575.1 · 47,097–47,661 bp · +
trnF-GAA · NC_058575.1 · 47,955–48,027 bp · +
trnM-CAU · NC_058575.1 · 52,173–52,245 bp · +
rbcL · NC_058575.1 · 55,111–56,565 bp · +
accD · NC_058575.1 · 57,270–58,751 bp · +
psaI · NC_058575.1 · 59,451–59,561 bp · +
ycf4 · NC_058575.1 · 60,008–60,562 bp · +
cemA · NC_058575.1 · 61,153–61,842 bp · +
petA · NC_058575.1 · 62,057–63,019 bp · +
petL · NC_058575.1 · 65,733–65,828 bp · +
petG · NC_058575.1 · 66,003–66,116 bp · +
psaJ · NC_058575.1 · 66,836–66,970 bp · +
rpl33 · NC_058575.1 · 67,432–67,632 bp · +
rps18 · NC_058575.1 · 67,799–68,104 bp · +
rps12 · NC_058575.1 · 138,574–139,366 bp · +
psbB · NC_058575.1 · 72,077–73,603 bp · +
psbT · NC_058575.1 · 73,787–73,888 bp · +
psbH · NC_058575.1 · 74,191–74,409 bp · +
petB · NC_058575.1 · 74,535–75,901 bp · +
petD · NC_058575.1 · 76,090–77,282 bp · +
ycf2 · NC_058575.1 · 85,782–92,612 bp · +
ycf15 · NC_058575.1 · 92,802–92,951 bp · +
trnV-GAC · NC_058575.1 · 99,317–99,388 bp · +
rrn16 · NC_058575.1 · 99,615–101,105 bp · +
trnI-GAU · NC_058575.1 · 101,403–102,421 bp · +
trnA-UGC · NC_058575.1 · 102,486–103,364 bp · +
rrn23 · NC_058575.1 · 103,536–106,346 bp · +
rrn4.5 · NC_058575.1 · 106,445–106,547 bp · +
rrn5 · NC_058575.1 · 106,803–106,923 bp · +
trnR-ACG · NC_058575.1 · 107,167–107,240 bp · +
ycf1 · NC_058575.1 · 108,216–109,346 bp · +
rpl32 · NC_058575.1 · 111,940–112,110 bp · +
trnL-UAG · NC_058575.1 · 112,875–112,954 bp · +
ccsA · NC_058575.1 · 113,043–114,014 bp · +
trnN-GUU · NC_058575.1 · 128,355–128,426 bp · +
rps7 · NC_058575.1 · 139,420–139,887 bp · +
ndhB · NC_058575.1 · 140,158–142,365 bp · +
trnL-CAA · NC_058575.1 · 142,937–143,017 bp · +
trnI-CAU · NC_058575.1 · 150,542–150,615 bp · +
rpl23 · NC_058575.1 · 150,781–151,062 bp · +
rpl2 · NC_058575.1 · 151,081–152,559 bp · +
rps19 · NC_058575.1 · 152,627–152,669 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon nervosus
ANNOTATED PLASTOME
NC_058575.1
152,669 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38167 76334 114502 152669 bp
Forward strand 5′ → 3′
psbK psbI trnG trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1683 4263 2581 Locate
matK gene − 2003 3523 1521 Locate
rps16 gene − 4788 5933 1146 Locate
trnQ-UUG gene − 6878 6949 72 Locate
psbK gene + 7343 7528 186 Locate
psbI gene + 7916 8026 111 Locate
trnS-GCU gene − 8182 8269 88 Locate
trnG gene + 9031 9789 759 Locate
trnR-UCU gene + 9981 10052 72 Locate
atpA gene − 10156 11679 1524 Locate
atpF gene − 11789 13034 1246 Locate
atpH gene − 13326 13571 246 Locate
atpI gene − 14573 15316 744 Locate
rps2 gene − 15543 16253 711 Locate
rpoC2 gene − 16470 20651 4182 Locate
rpoC1 gene − 20816 23649 2834 Locate
rpoB gene − 23676 26888 3213 Locate
trnC-GCA gene + 28078 28148 71 Locate
petN gene + 28311 28400 90 Locate
psbM gene − 29393 29497 105 Locate
trnD-GUC gene − 30016 30089 74 Locate
trnY-GUA gene − 30200 30283 84 Locate
trnE-UUC gene − 30361 30433 73 Locate
trnT-GGU gene + 31043 31114 72 Locate
psbD gene + 32432 33493 1062 Locate
psbC gene + 33441 34862 1422 Locate
trnS-UGA gene − 35098 35190 93 Locate
psbZ gene + 35531 35719 189 Locate
trnG-GCC gene + 35964 36034 71 Locate
trnfM-CAU gene − 36225 36298 74 Locate
rps14 gene − 36444 36746 303 Locate
psaB gene − 36869 39073 2205 Locate
psaA gene − 39099 41351 2253 Locate
ycf3 gene − 42125 44072 1948 Locate
trnS-GGA gene + 44936 45022 87 Locate
rps4 gene − 45319 45924 606 Locate
trnT-UGU gene − 46338 46410 73 Locate
trnL-UAA gene + 47097 47661 565 Locate
trnF-GAA gene + 47955 48027 73 Locate
ndhJ gene − 48695 49171 477 Locate
ndhK gene − 49282 49959 678 Locate
ndhC gene − 50011 50373 363 Locate
trnV-UAC gene − 51336 51992 657 Locate
trnM-CAU gene + 52173 52245 73 Locate
atpE gene − 52446 52847 402 Locate
atpB gene − 52844 54340 1497 Locate
rbcL gene + 55111 56565 1455 Locate
accD gene + 57270 58751 1482 Locate
psaI gene + 59451 59561 111 Locate
ycf4 gene + 60008 60562 555 Locate
cemA gene + 61153 61842 690 Locate
petA gene + 62057 63019 963 Locate
psbJ gene − 64058 64180 123 Locate
psbL gene − 64315 64431 117 Locate
psbF gene − 64455 64574 120 Locate
psbE gene − 64589 64840 252 Locate
petL gene + 65733 65828 96 Locate
petG gene + 66003 66116 114 Locate
trnW-CCA gene − 66239 66312 74 Locate
trnP-UGG gene − 66481 66554 74 Locate
psaJ gene + 66836 66970 135 Locate
rpl33 gene + 67432 67632 201 Locate
rps18 gene + 67799 68104 306 Locate
rpl20 gene − 68339 68725 387 Locate
rps12 gene − 69457 69570 114 Locate
clpP gene − 69689 71604 1916 Locate
psbB gene + 72077 73603 1527 Locate
psbT gene + 73787 73888 102 Locate
psbN gene − 73954 74085 132 Locate
psbH gene + 74191 74409 219 Locate
petB gene + 74535 75901 1367 Locate
petD gene + 76090 77282 1193 Locate
rpoA gene − 77459 78466 1008 Locate
rps11 gene − 78538 78954 417 Locate
rpl36 gene − 79070 79183 114 Locate
infA gene − 79279 79512 234 Locate
rps8 gene − 79639 80043 405 Locate
rpl14 gene − 80226 80594 369 Locate
rpl16 gene − 80728 81995 1268 Locate
rps3 gene − 82139 82801 663 Locate
rpl22 gene − 82786 83259 474 Locate
rps19 gene − 83324 83602 279 Locate
rpl2 gene − 83670 85148 1479 Locate
rpl23 gene − 85167 85448 282 Locate
trnI-CAU gene − 85614 85687 74 Locate
ycf2 gene + 85782 92612 6831 Locate
ycf15 gene + 92802 92951 150 Locate
trnL-CAA gene − 93212 93292 81 Locate
ndhB gene − 93864 96071 2208 Locate
rps7 gene − 96342 96809 468 Locate
rps12 gene − 96863 97655 793 Locate
trnV-GAC gene + 99317 99388 72 Locate
rrn16 gene + 99615 101105 1491 Locate
trnI-GAU gene + 101403 102421 1019 Locate
trnA-UGC gene + 102486 103364 879 Locate
rrn23 gene + 103536 106346 2811 Locate
rrn4.5 gene + 106445 106547 103 Locate
rrn5 gene + 106803 106923 121 Locate
trnR-ACG gene + 107167 107240 74 Locate
trnN-GUU gene − 107803 107874 72 Locate
ycf1 gene + 108216 109346 1131 Locate
ndhF gene − 109240 111471 2232 Locate
rpl32 gene + 111940 112110 171 Locate
trnL-UAG gene + 112875 112954 80 Locate
ccsA gene + 113043 114014 972 Locate
ndhD gene − 114247 115776 1530 Locate
psaC gene − 115867 116112 246 Locate
ndhE gene − 116368 116673 306 Locate
ndhG gene − 116888 117418 531 Locate
ndhI gene − 117777 118283 507 Locate
ndhA gene − 118364 120486 2123 Locate
ndhH gene − 120488 121669 1182 Locate
rps15 gene − 121784 122056 273 Locate
ycf1 gene − 122491 128013 5523 Locate
trnN-GUU gene + 128355 128426 72 Locate
trnR-ACG gene − 128989 129062 74 Locate
rrn5 gene − 129306 129426 121 Locate
rrn4.5 gene − 129682 129784 103 Locate
rrn23 gene − 129883 132693 2811 Locate
trnA-UGC gene − 132865 133743 879 Locate
trnI-GAU gene − 133808 134826 1019 Locate
rrn16 gene − 135124 136614 1491 Locate
trnV-GAC gene − 136841 136912 72 Locate
rps12 gene + 138574 139366 793 Locate
rps7 gene + 139420 139887 468 Locate
ndhB gene + 140158 142365 2208 Locate
trnL-CAA gene + 142937 143017 81 Locate
ycf15 gene − 143278 143427 150 Locate
ycf2 gene − 143617 150447 6831 Locate
trnI-CAU gene + 150542 150615 74 Locate
rpl23 gene + 150781 151062 282 Locate
rpl2 gene + 151081 152559 1479 Locate
rps19 gene + 152627 152669 43 Locate
Status Available
Accession NC_058575.1
Length 152,669 bp
GC content 37.6%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources