Coordinate-aware organelle record

Isodon oreophilus chloroplast genome

Available NC_067672.1 152,274 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	337	1396	1059
trnK-UUU	gene	translation-rna	−	1627	4207	2580
matK	gene	other	−	1947	3468	1521
ON849_pgp086	gene	other	−	4745	5887	1142
trnQ-UUG	gene	translation-rna	−	6732	6804	72
psbK	gene	photosystem-ii	+	7198	7384	186
psbI	gene	photosystem-ii	+	7773	7884	111
trnS-GCU	gene	translation-rna	−	8038	8126	88
trnG-UCC	gene	translation-rna	+	8793	9553	760
trnR-UCU	gene	translation-rna	+	9742	9814	72
atpA	gene	atp-synthase	−	9918	11442	1524
atpF	gene	atp-synthase	−	11542	12791	1249
atpH	gene	atp-synthase	−	13082	13328	246
atpI	gene	atp-synthase	−	14272	15016	744
rps2	gene	ribosomal-protein	−	15241	15952	711
rpoC2	gene	rna-polymerase	−	16165	20353	4188
rpoC1	gene	rna-polymerase	−	20517	23351	2834
rpoB	gene	rna-polymerase	−	23377	26590	3213
trnC-GCA	gene	translation-rna	+	27781	27852	71
petN	gene	cytochrome	+	28014	28104	90
psbM	gene	photosystem-ii	−	29096	29201	105
trnD-GUC	gene	translation-rna	−	29719	29793	74
trnY-GUA	gene	translation-rna	−	29903	29987	84
trnE-UUC	gene	translation-rna	−	30064	30137	73
trnT-GGU	gene	translation-rna	+	30712	30784	72
psbD	gene	photosystem-ii	+	32156	33218	1062
psbC	gene	photosystem-ii	+	33165	34587	1422
trnS-UGA	gene	translation-rna	−	34822	34915	93
psbZ	gene	photosystem-ii	+	35255	35444	189
trnG-GCC	gene	translation-rna	+	35681	35752	71
trnfM-CAU	gene	translation-rna	−	35924	35998	74
rps14	gene	ribosomal-protein	−	36142	36445	303
psaB	gene	photosystem-i	−	36567	38772	2205
psaA	gene	photosystem-i	−	38797	41050	2253
ycf3	gene	other	−	41849	43810	1961
trnS-GGA	gene	translation-rna	+	44655	44742	87
rps4	gene	ribosomal-protein	−	45038	45644	606
trnT-UGU	gene	translation-rna	−	46056	46129	73
trnL-UAA	gene	translation-rna	+	46822	47366	544
trnF-GAA	gene	translation-rna	+	47665	47738	73
ndhJ	gene	nad-dehydrogenase	−	48416	48893	477
ndhK	gene	nad-dehydrogenase	−	49003	49681	678
ndhC	gene	nad-dehydrogenase	−	49732	50095	363
trnV-UAC	gene	translation-rna	−	51050	51708	658
trnM-CAU	gene	translation-rna	+	51888	51961	73
atpE	gene	atp-synthase	−	52166	52568	402
atpB	gene	atp-synthase	−	52564	54061	1497
rbcL	gene	other	+	54859	56305	1446
accD	gene	other	+	56987	58469	1482
psaI	gene	photosystem-i	+	59166	59277	111
ycf4	gene	other	+	59721	60276	555
cemA	gene	other	+	60861	61551	690
petA	gene	cytochrome	+	61765	62728	963
psbJ	gene	photosystem-ii	−	63733	63856	123
psbL	gene	photosystem-ii	−	63990	64107	117
psbF	gene	photosystem-ii	−	64130	64250	120
psbE	gene	photosystem-ii	−	64264	64516	252
petL	gene	cytochrome	+	65409	65505	96
petG	gene	cytochrome	+	65679	65793	114
trnW-CCA	gene	translation-rna	−	65915	65989	74
trnP-UGG	gene	translation-rna	−	66158	66232	74
psaJ	gene	photosystem-i	+	66515	66650	135
rpl33	gene	ribosomal-protein	+	67097	67298	201
rps18	gene	ribosomal-protein	+	67464	67770	306
rpl20	gene	ribosomal-protein	−	68004	68391	387
rps12	gene	ribosomal-protein	−	69122	97284	28162
rps12	gene	ribosomal-protein	+	69122	139006	69884
clpP	gene	other	−	69354	71280	1926
psbB	gene	photosystem-ii	+	71752	73279	1527
psbT	gene	photosystem-ii	+	73463	73565	102
psbN	gene	photosystem-ii	−	73630	73762	132
psbH	gene	photosystem-ii	+	73867	74086	219
petB	gene	cytochrome	+	74220	75577	1357
petD	gene	cytochrome	+	75765	76959	1194
rpoA	gene	rna-polymerase	−	77135	78143	1008
rps11	gene	ribosomal-protein	−	78214	78631	417
rpl36	gene	ribosomal-protein	−	78740	78854	114
infA	gene	other	−	78949	79183	234
rps8	gene	ribosomal-protein	−	79308	79713	405
rpl14	gene	ribosomal-protein	−	79884	80253	369
rpl16	gene	ribosomal-protein	−	80390	81659	1269
rps3	gene	ribosomal-protein	−	81811	82474	663
rpl22	gene	ribosomal-protein	−	82458	82932	474
rps19	gene	ribosomal-protein	−	82996	83275	279
rpl2	gene	ribosomal-protein	−	83343	84822	1479
rpl23	gene	ribosomal-protein	−	84840	85122	282
trnI-CAU	gene	translation-rna	−	85287	85361	74
ycf2	gene	other	+	85455	92259	6804
ycf15	gene	other	+	92448	92598	150
trnL-CAA	gene	translation-rna	−	92858	92939	81
ndhB	gene	nad-dehydrogenase	−	93501	95709	2208
rps7	gene	ribosomal-protein	−	95979	96447	468
trnV-GAC	gene	translation-rna	+	98938	99010	72
rrn16	gene	ribosomal-rna	+	99236	100727	1491
trnI-GAU	gene	translation-rna	+	101024	102043	1019
trnA-UGC	gene	translation-rna	+	102107	102986	879
rrn23	gene	ribosomal-rna	+	103149	105960	2811
rrn4.5	gene	ribosomal-rna	+	106058	106161	103
rrn5	gene	ribosomal-rna	+	106416	106537	121
trnR-ACG	gene	translation-rna	+	106780	106854	74
trnN-GUU	gene	translation-rna	−	107426	107498	72
ycf1	gene	other	+	107838	108969	1131
ndhF	gene	nad-dehydrogenase	−	108862	111094	2232
rpl32	gene	ribosomal-protein	+	111578	111749	171
trnL-UAG	gene	translation-rna	+	112506	112586	80
ccsA	gene	other	+	112673	113645	972
ndhD	gene	nad-dehydrogenase	−	113875	115405	1530
psaC	gene	photosystem-i	−	115495	115741	246
ndhE	gene	nad-dehydrogenase	−	115996	116302	306
ndhG	gene	nad-dehydrogenase	−	116516	117047	531
ndhI	gene	nad-dehydrogenase	−	117415	117922	507
ndhA	gene	nad-dehydrogenase	−	118002	120112	2110
ndhH	gene	nad-dehydrogenase	−	120113	121295	1182
rps15	gene	ribosomal-protein	−	121409	121673	264
ycf1	gene	other	−	122112	127668	5556
trnN-GUU	gene	translation-rna	+	128008	128080	72
trnR-ACG	gene	translation-rna	−	128652	128726	74
rrn5	gene	ribosomal-rna	−	128969	129090	121
rrn4.5	gene	ribosomal-rna	−	129345	129448	103
rrn23	gene	ribosomal-rna	−	129546	132357	2811
trnA-UGC	gene	translation-rna	−	132520	133399	879
trnI-GAU	gene	translation-rna	−	133463	134482	1019
rrn16	gene	ribosomal-rna	−	134779	136270	1491
trnV-GAC	gene	translation-rna	−	136496	136568	72
rps7	gene	ribosomal-protein	+	139059	139527	468
ndhB	gene	nad-dehydrogenase	+	139797	142005	2208
trnL-CAA	gene	translation-rna	+	142567	142653	86
ycf15	gene	other	−	142908	143058	150
ycf2	gene	other	−	143247	150051	6804
trnI-CAU	gene	translation-rna	+	150145	150219	74
rpl23	gene	ribosomal-protein	+	150384	150666	282
rpl2	gene	ribosomal-protein	+	150684	152163	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_067672.1DNA · accDNC_067672DNA · atpBNC_067672DNA · matKNC_067672DNA · ndhFNC_067672DNA · psbANC_067672DNA · rbcLNC_067672DNA · rps12NC_067672DNA · ycf1NC_067672