Isodon oresbius chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067673.1 · 11–85 bp · −
psbA · NC_067673.1 · 393–1,451 bp · −
trnK-UUU · NC_067673.1 · 1,683–4,263 bp · −
matK · NC_067673.1 · 2,003–3,523 bp · −
ON848_pgp086 · NC_067673.1 · 4,789–5,934 bp · −
trnQ-UUG · NC_067673.1 · 6,880–6,951 bp · −
trnS-GCU · NC_067673.1 · 8,184–8,271 bp · −
atpA · NC_067673.1 · 10,159–11,682 bp · −
atpF · NC_067673.1 · 11,788–13,033 bp · −
atpH · NC_067673.1 · 13,325–13,570 bp · −
atpI · NC_067673.1 · 14,571–15,314 bp · −
rps2 · NC_067673.1 · 15,540–16,250 bp · −
rpoC2 · NC_067673.1 · 16,466–20,647 bp · −
rpoC1 · NC_067673.1 · 20,812–23,645 bp · −
rpoB · NC_067673.1 · 23,672–26,884 bp · −
psbM · NC_067673.1 · 29,383–29,487 bp · −
trnD-GUC · NC_067673.1 · 30,006–30,079 bp · −
trnY-GUA · NC_067673.1 · 30,190–30,273 bp · −
trnE-UUC · NC_067673.1 · 30,351–30,423 bp · −
trnS-UGA · NC_067673.1 · 35,106–35,198 bp · −
trnfM-CAU · NC_067673.1 · 36,231–36,304 bp · −
rps14 · NC_067673.1 · 36,450–36,752 bp · −
psaB · NC_067673.1 · 36,875–39,079 bp · −
psaA · NC_067673.1 · 39,105–41,357 bp · −
ycf3 · NC_067673.1 · 42,105–44,052 bp · −
rps4 · NC_067673.1 · 45,300–45,905 bp · −
trnT-UGU · NC_067673.1 · 46,329–46,401 bp · −
ndhJ · NC_067673.1 · 48,642–49,118 bp · −
ndhK · NC_067673.1 · 49,229–49,906 bp · −
ndhC · NC_067673.1 · 49,958–50,320 bp · −
trnV-UAC · NC_067673.1 · 51,273–51,928 bp · −
atpE · NC_067673.1 · 52,382–52,783 bp · −
atpB · NC_067673.1 · 52,780–54,276 bp · −
psbJ · NC_067673.1 · 63,991–64,113 bp · −
psbL · NC_067673.1 · 64,248–64,364 bp · −
psbF · NC_067673.1 · 64,388–64,507 bp · −
psbE · NC_067673.1 · 64,522–64,773 bp · −
trnW-CCA · NC_067673.1 · 66,172–66,245 bp · −
trnP-UGG · NC_067673.1 · 66,414–66,487 bp · −
rpl20 · NC_067673.1 · 68,271–68,657 bp · −
rps12 · NC_067673.1 · 69,392–69,505 bp · −
rps12 · NC_067673.1 · 96,803–97,595 bp · −
clpP · NC_067673.1 · 69,624–71,539 bp · −
psbN · NC_067673.1 · 73,889–74,020 bp · −
rpoA · NC_067673.1 · 77,394–78,401 bp · −
rps11 · NC_067673.1 · 78,473–78,889 bp · −
rpl36 · NC_067673.1 · 79,005–79,118 bp · −
infA · NC_067673.1 · 79,214–79,447 bp · −
rps8 · NC_067673.1 · 79,574–79,978 bp · −
rpl14 · NC_067673.1 · 80,161–80,529 bp · −
rpl16 · NC_067673.1 · 80,663–81,930 bp · −
rps3 · NC_067673.1 · 82,079–82,741 bp · −
rpl22 · NC_067673.1 · 82,726–83,199 bp · −
rps19 · NC_067673.1 · 83,264–83,542 bp · −
rpl2 · NC_067673.1 · 83,610–85,088 bp · −
rpl23 · NC_067673.1 · 85,107–85,388 bp · −
trnI-CAU · NC_067673.1 · 85,554–85,627 bp · −
trnL-CAA · NC_067673.1 · 93,152–93,232 bp · −
ndhB · NC_067673.1 · 93,804–96,011 bp · −
rps7 · NC_067673.1 · 96,282–96,749 bp · −
trnN-GUU · NC_067673.1 · 107,747–107,818 bp · −
ndhF · NC_067673.1 · 109,184–111,415 bp · −
ndhD · NC_067673.1 · 114,198–115,733 bp · −
psaC · NC_067673.1 · 115,824–116,069 bp · −
ndhE · NC_067673.1 · 116,325–116,630 bp · −
ndhG · NC_067673.1 · 116,845–117,375 bp · −
ndhI · NC_067673.1 · 117,734–118,240 bp · −
ndhA · NC_067673.1 · 118,321–120,444 bp · −
ndhH · NC_067673.1 · 120,446–121,627 bp · −
rps15 · NC_067673.1 · 121,742–122,014 bp · −
ycf1 · NC_067673.1 · 122,444–127,966 bp · −
trnR-ACG · NC_067673.1 · 128,946–129,019 bp · −
rrn5 · NC_067673.1 · 129,263–129,383 bp · −
rrn4.5 · NC_067673.1 · 129,639–129,741 bp · −
rrn23 · NC_067673.1 · 129,840–132,650 bp · −
trnA-UGC · NC_067673.1 · 132,822–133,700 bp · −
trnI-GAU · NC_067673.1 · 133,765–134,782 bp · −
rrn16 · NC_067673.1 · 135,080–136,570 bp · −
trnV-GAC · NC_067673.1 · 136,797–136,868 bp · −
ycf15 · NC_067673.1 · 143,235–143,384 bp · −
ycf2 · NC_067673.1 · 143,574–150,404 bp · −
psbK · NC_067673.1 · 7,345–7,530 bp · +
psbI · NC_067673.1 · 7,918–8,028 bp · +
trnG-UCC · NC_067673.1 · 9,034–9,793 bp · +
trnR-UCU · NC_067673.1 · 9,984–10,055 bp · +
trnC-GCA · NC_067673.1 · 28,069–28,139 bp · +
petN · NC_067673.1 · 28,302–28,391 bp · +
trnT-GGU · NC_067673.1 · 31,044–31,115 bp · +
psbD · NC_067673.1 · 32,440–33,501 bp · +
psbC · NC_067673.1 · 33,449–34,870 bp · +
psbZ · NC_067673.1 · 35,539–35,727 bp · +
trnG-GCC · NC_067673.1 · 35,972–36,042 bp · +
trnS-GGA · NC_067673.1 · 44,917–45,003 bp · +
trnL-UAA · NC_067673.1 · 47,088–47,651 bp · +
trnF-GAA · NC_067673.1 · 47,945–48,017 bp · +
trnM-CAU · NC_067673.1 · 52,109–52,181 bp · +
rbcL · NC_067673.1 · 55,068–56,501 bp · +
accD · NC_067673.1 · 57,206–58,687 bp · +
psaI · NC_067673.1 · 59,387–59,497 bp · +
ycf4 · NC_067673.1 · 59,943–60,497 bp · +
cemA · NC_067673.1 · 61,088–61,777 bp · +
petA · NC_067673.1 · 61,992–62,954 bp · +
petL · NC_067673.1 · 65,666–65,761 bp · +
petG · NC_067673.1 · 65,936–66,049 bp · +
psaJ · NC_067673.1 · 66,768–66,902 bp · +
rpl33 · NC_067673.1 · 67,364–67,564 bp · +
rps18 · NC_067673.1 · 67,731–68,036 bp · +
rps12 · NC_067673.1 · 138,531–139,323 bp · +
psbB · NC_067673.1 · 72,012–73,538 bp · +
psbT · NC_067673.1 · 73,722–73,823 bp · +
psbH · NC_067673.1 · 74,126–74,344 bp · +
petB · NC_067673.1 · 74,470–75,836 bp · +
petD · NC_067673.1 · 76,025–77,217 bp · +
ycf2 · NC_067673.1 · 85,722–92,552 bp · +
ycf15 · NC_067673.1 · 92,742–92,891 bp · +
trnV-GAC · NC_067673.1 · 99,258–99,329 bp · +
rrn16 · NC_067673.1 · 99,556–101,046 bp · +
trnI-GAU · NC_067673.1 · 101,344–102,361 bp · +
trnA-UGC · NC_067673.1 · 102,426–103,304 bp · +
rrn23 · NC_067673.1 · 103,476–106,286 bp · +
rrn4.5 · NC_067673.1 · 106,385–106,487 bp · +
rrn5 · NC_067673.1 · 106,743–106,863 bp · +
trnR-ACG · NC_067673.1 · 107,107–107,180 bp · +
ycf1 · NC_067673.1 · 108,160–109,290 bp · +
rpl32 · NC_067673.1 · 111,891–112,061 bp · +
trnL-UAG · NC_067673.1 · 112,825–112,904 bp · +
ccsA · NC_067673.1 · 112,993–113,964 bp · +
trnN-GUU · NC_067673.1 · 128,308–128,379 bp · +
rps7 · NC_067673.1 · 139,377–139,844 bp · +
ndhB · NC_067673.1 · 140,115–142,322 bp · +
trnL-CAA · NC_067673.1 · 142,894–142,974 bp · +
trnI-CAU · NC_067673.1 · 150,499–150,572 bp · +
rpl23 · NC_067673.1 · 150,738–151,019 bp · +
rpl2 · NC_067673.1 · 151,038–152,516 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon oresbius
ANNOTATED PLASTOME
NC_067673.1
152,626 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38156 76313 114470 152626 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK ON848_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1683 4263 2581 Locate
matK gene − 2003 3523 1521 Locate
ON848_pgp086 gene − 4789 5934 1146 Locate
trnQ-UUG gene − 6880 6951 72 Locate
psbK gene + 7345 7530 186 Locate
psbI gene + 7918 8028 111 Locate
trnS-GCU gene − 8184 8271 88 Locate
trnG-UCC gene + 9034 9793 760 Locate
trnR-UCU gene + 9984 10055 72 Locate
atpA gene − 10159 11682 1524 Locate
atpF gene − 11788 13033 1246 Locate
atpH gene − 13325 13570 246 Locate
atpI gene − 14571 15314 744 Locate
rps2 gene − 15540 16250 711 Locate
rpoC2 gene − 16466 20647 4182 Locate
rpoC1 gene − 20812 23645 2834 Locate
rpoB gene − 23672 26884 3213 Locate
trnC-GCA gene + 28069 28139 71 Locate
petN gene + 28302 28391 90 Locate
psbM gene − 29383 29487 105 Locate
trnD-GUC gene − 30006 30079 74 Locate
trnY-GUA gene − 30190 30273 84 Locate
trnE-UUC gene − 30351 30423 73 Locate
trnT-GGU gene + 31044 31115 72 Locate
psbD gene + 32440 33501 1062 Locate
psbC gene + 33449 34870 1422 Locate
trnS-UGA gene − 35106 35198 93 Locate
psbZ gene + 35539 35727 189 Locate
trnG-GCC gene + 35972 36042 71 Locate
trnfM-CAU gene − 36231 36304 74 Locate
rps14 gene − 36450 36752 303 Locate
psaB gene − 36875 39079 2205 Locate
psaA gene − 39105 41357 2253 Locate
ycf3 gene − 42105 44052 1948 Locate
trnS-GGA gene + 44917 45003 87 Locate
rps4 gene − 45300 45905 606 Locate
trnT-UGU gene − 46329 46401 73 Locate
trnL-UAA gene + 47088 47651 564 Locate
trnF-GAA gene + 47945 48017 73 Locate
ndhJ gene − 48642 49118 477 Locate
ndhK gene − 49229 49906 678 Locate
ndhC gene − 49958 50320 363 Locate
trnV-UAC gene − 51273 51928 656 Locate
trnM-CAU gene + 52109 52181 73 Locate
atpE gene − 52382 52783 402 Locate
atpB gene − 52780 54276 1497 Locate
rbcL gene + 55068 56501 1434 Locate
accD gene + 57206 58687 1482 Locate
psaI gene + 59387 59497 111 Locate
ycf4 gene + 59943 60497 555 Locate
cemA gene + 61088 61777 690 Locate
petA gene + 61992 62954 963 Locate
psbJ gene − 63991 64113 123 Locate
psbL gene − 64248 64364 117 Locate
psbF gene − 64388 64507 120 Locate
psbE gene − 64522 64773 252 Locate
petL gene + 65666 65761 96 Locate
petG gene + 65936 66049 114 Locate
trnW-CCA gene − 66172 66245 74 Locate
trnP-UGG gene − 66414 66487 74 Locate
psaJ gene + 66768 66902 135 Locate
rpl33 gene + 67364 67564 201 Locate
rps18 gene + 67731 68036 306 Locate
rpl20 gene − 68271 68657 387 Locate
rps12 gene − 69392 69505 114 Locate
clpP gene − 69624 71539 1916 Locate
psbB gene + 72012 73538 1527 Locate
psbT gene + 73722 73823 102 Locate
psbN gene − 73889 74020 132 Locate
psbH gene + 74126 74344 219 Locate
petB gene + 74470 75836 1367 Locate
petD gene + 76025 77217 1193 Locate
rpoA gene − 77394 78401 1008 Locate
rps11 gene − 78473 78889 417 Locate
rpl36 gene − 79005 79118 114 Locate
infA gene − 79214 79447 234 Locate
rps8 gene − 79574 79978 405 Locate
rpl14 gene − 80161 80529 369 Locate
rpl16 gene − 80663 81930 1268 Locate
rps3 gene − 82079 82741 663 Locate
rpl22 gene − 82726 83199 474 Locate
rps19 gene − 83264 83542 279 Locate
rpl2 gene − 83610 85088 1479 Locate
rpl23 gene − 85107 85388 282 Locate
trnI-CAU gene − 85554 85627 74 Locate
ycf2 gene + 85722 92552 6831 Locate
ycf15 gene + 92742 92891 150 Locate
trnL-CAA gene − 93152 93232 81 Locate
ndhB gene − 93804 96011 2208 Locate
rps7 gene − 96282 96749 468 Locate
rps12 gene − 96803 97595 793 Locate
trnV-GAC gene + 99258 99329 72 Locate
rrn16 gene + 99556 101046 1491 Locate
trnI-GAU gene + 101344 102361 1018 Locate
trnA-UGC gene + 102426 103304 879 Locate
rrn23 gene + 103476 106286 2811 Locate
rrn4.5 gene + 106385 106487 103 Locate
rrn5 gene + 106743 106863 121 Locate
trnR-ACG gene + 107107 107180 74 Locate
trnN-GUU gene − 107747 107818 72 Locate
ycf1 gene + 108160 109290 1131 Locate
ndhF gene − 109184 111415 2232 Locate
rpl32 gene + 111891 112061 171 Locate
trnL-UAG gene + 112825 112904 80 Locate
ccsA gene + 112993 113964 972 Locate
ndhD gene − 114198 115733 1536 Locate
psaC gene − 115824 116069 246 Locate
ndhE gene − 116325 116630 306 Locate
ndhG gene − 116845 117375 531 Locate
ndhI gene − 117734 118240 507 Locate
ndhA gene − 118321 120444 2124 Locate
ndhH gene − 120446 121627 1182 Locate
rps15 gene − 121742 122014 273 Locate
ycf1 gene − 122444 127966 5523 Locate
trnN-GUU gene + 128308 128379 72 Locate
trnR-ACG gene − 128946 129019 74 Locate
rrn5 gene − 129263 129383 121 Locate
rrn4.5 gene − 129639 129741 103 Locate
rrn23 gene − 129840 132650 2811 Locate
trnA-UGC gene − 132822 133700 879 Locate
trnI-GAU gene − 133765 134782 1018 Locate
rrn16 gene − 135080 136570 1491 Locate
trnV-GAC gene − 136797 136868 72 Locate
rps12 gene + 138531 139323 793 Locate
rps7 gene + 139377 139844 468 Locate
ndhB gene + 140115 142322 2208 Locate
trnL-CAA gene + 142894 142974 81 Locate
ycf15 gene − 143235 143384 150 Locate
ycf2 gene − 143574 150404 6831 Locate
trnI-CAU gene + 150499 150572 74 Locate
rpl23 gene + 150738 151019 282 Locate
rpl2 gene + 151038 152516 1479 Locate
Status Available
Accession NC_067673.1
Length 152,626 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources