Isodon phyllopodus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067707.1 · 11–85 bp · −
psbA · NC_067707.1 · 317–1,375 bp · −
trnK-UUU · NC_067707.1 · 1,607–4,186 bp · −
matK · NC_067707.1 · 1,927–3,447 bp · −
OOC27_pgp086 · NC_067707.1 · 4,725–5,865 bp · −
trnQ-UUG · NC_067707.1 · 6,717–6,788 bp · −
trnS-GCU · NC_067707.1 · 8,024–8,111 bp · −
atpA · NC_067707.1 · 9,898–11,421 bp · −
atpF · NC_067707.1 · 11,522–12,768 bp · −
atpH · NC_067707.1 · 13,060–13,305 bp · −
atpI · NC_067707.1 · 14,250–14,993 bp · −
rps2 · NC_067707.1 · 15,219–15,929 bp · −
rpoC2 · NC_067707.1 · 16,144–20,331 bp · −
rpoC1 · NC_067707.1 · 20,496–23,329 bp · −
rpoB · NC_067707.1 · 23,356–26,568 bp · −
psbM · NC_067707.1 · 29,075–29,179 bp · −
trnD-GUC · NC_067707.1 · 29,698–29,771 bp · −
trnY-GUA · NC_067707.1 · 29,882–29,965 bp · −
trnE-UUC · NC_067707.1 · 30,043–30,115 bp · −
trnS-UGA · NC_067707.1 · 34,801–34,893 bp · −
trnfM-CAU · NC_067707.1 · 35,903–35,976 bp · −
rps14 · NC_067707.1 · 36,121–36,423 bp · −
psaB · NC_067707.1 · 36,546–38,750 bp · −
psaA · NC_067707.1 · 38,776–41,028 bp · −
ycf3 · NC_067707.1 · 41,827–43,787 bp · −
rps4 · NC_067707.1 · 45,016–45,621 bp · −
trnT-UGU · NC_067707.1 · 46,034–46,106 bp · −
ndhJ · NC_067707.1 · 48,395–48,871 bp · −
ndhK · NC_067707.1 · 48,982–49,659 bp · −
ndhC · NC_067707.1 · 49,711–50,073 bp · −
trnV-UAC · NC_067707.1 · 51,028–51,685 bp · −
atpE · NC_067707.1 · 52,144–52,545 bp · −
atpB · NC_067707.1 · 52,542–54,038 bp · −
psbJ · NC_067707.1 · 63,711–63,833 bp · −
psbL · NC_067707.1 · 63,968–64,084 bp · −
psbF · NC_067707.1 · 64,108–64,227 bp · −
psbE · NC_067707.1 · 64,242–64,493 bp · −
trnW-CCA · NC_067707.1 · 65,893–65,966 bp · −
trnP-UGG · NC_067707.1 · 66,136–66,209 bp · −
rpl20 · NC_067707.1 · 67,982–68,368 bp · −
rps12 · NC_067707.1 · 69,100–69,213 bp · −
rps12 · NC_067707.1 · 96,475–97,258 bp · −
clpP · NC_067707.1 · 69,332–71,256 bp · −
psbN · NC_067707.1 · 73,607–73,738 bp · −
rpoA · NC_067707.1 · 77,112–78,119 bp · −
rps11 · NC_067707.1 · 78,191–78,607 bp · −
rpl36 · NC_067707.1 · 78,717–78,830 bp · −
infA · NC_067707.1 · 78,926–79,159 bp · −
rps8 · NC_067707.1 · 79,285–79,689 bp · −
rpl14 · NC_067707.1 · 79,861–80,229 bp · −
rpl16 · NC_067707.1 · 80,366–81,634 bp · −
rps3 · NC_067707.1 · 81,787–82,449 bp · −
rpl22 · NC_067707.1 · 82,434–82,907 bp · −
rps19 · NC_067707.1 · 82,972–83,250 bp · −
rpl2 · NC_067707.1 · 83,318–84,796 bp · −
rpl23 · NC_067707.1 · 84,815–85,096 bp · −
trnI-CAU · NC_067707.1 · 85,262–85,335 bp · −
trnL-CAA · NC_067707.1 · 92,833–92,913 bp · −
ndhB · NC_067707.1 · 93,476–95,683 bp · −
rps7 · NC_067707.1 · 95,954–96,421 bp · −
trnN-GUU · NC_067707.1 · 107,401–107,472 bp · −
ndhF · NC_067707.1 · 108,837–111,068 bp · −
ndhD · NC_067707.1 · 113,843–115,372 bp · −
psaC · NC_067707.1 · 115,463–115,708 bp · −
ndhE · NC_067707.1 · 115,964–116,269 bp · −
ndhG · NC_067707.1 · 116,484–117,014 bp · −
ndhI · NC_067707.1 · 117,383–117,889 bp · −
ndhA · NC_067707.1 · 117,970–120,079 bp · −
ndhH · NC_067707.1 · 120,081–121,262 bp · −
rps15 · NC_067707.1 · 121,377–121,640 bp · −
ycf1 · NC_067707.1 · 122,080–127,635 bp · −
trnR-ACG · NC_067707.1 · 128,620–128,693 bp · −
rrn5 · NC_067707.1 · 128,937–129,057 bp · −
rrn4.5 · NC_067707.1 · 129,313–129,415 bp · −
rrn23 · NC_067707.1 · 129,514–132,324 bp · −
trnA-UGC · NC_067707.1 · 132,488–133,366 bp · −
trnI-GAU · NC_067707.1 · 133,431–134,449 bp · −
rrn16 · NC_067707.1 · 134,747–136,237 bp · −
trnV-GAC · NC_067707.1 · 136,464–136,535 bp · −
ycf15 · NC_067707.1 · 142,876–143,025 bp · −
ycf2 · NC_067707.1 · 143,215–150,018 bp · −
psbK · NC_067707.1 · 7,183–7,368 bp · +
psbI · NC_067707.1 · 7,759–7,869 bp · +
trnG-UCC · NC_067707.1 · 8,773–9,532 bp · +
trnR-UCU · NC_067707.1 · 9,722–9,793 bp · +
trnC-GCA · NC_067707.1 · 27,760–27,830 bp · +
petN · NC_067707.1 · 27,993–28,082 bp · +
trnT-GGU · NC_067707.1 · 30,691–30,762 bp · +
psbD · NC_067707.1 · 32,135–33,196 bp · +
psbC · NC_067707.1 · 33,144–34,565 bp · +
psbZ · NC_067707.1 · 35,234–35,422 bp · +
trnG-GCC · NC_067707.1 · 35,660–35,730 bp · +
trnS-GGA · NC_067707.1 · 44,633–44,719 bp · +
trnL-UAA · NC_067707.1 · 46,801–47,344 bp · +
trnF-GAA · NC_067707.1 · 47,644–47,716 bp · +
trnM-CAU · NC_067707.1 · 51,866–51,938 bp · +
rbcL · NC_067707.1 · 54,837–56,282 bp · +
accD · NC_067707.1 · 56,965–58,446 bp · +
psaI · NC_067707.1 · 59,144–59,254 bp · +
ycf4 · NC_067707.1 · 59,699–60,253 bp · +
cemA · NC_067707.1 · 60,839–61,528 bp · +
petA · NC_067707.1 · 61,743–62,705 bp · +
petL · NC_067707.1 · 65,387–65,482 bp · +
petG · NC_067707.1 · 65,657–65,770 bp · +
psaJ · NC_067707.1 · 66,493–66,627 bp · +
rpl33 · NC_067707.1 · 67,075–67,275 bp · +
rps18 · NC_067707.1 · 67,442–67,747 bp · +
rps12 · NC_067707.1 · 138,190–138,973 bp · +
psbB · NC_067707.1 · 71,729–73,255 bp · +
psbT · NC_067707.1 · 73,440–73,541 bp · +
psbH · NC_067707.1 · 73,844–74,062 bp · +
petB · NC_067707.1 · 74,197–75,553 bp · +
petD · NC_067707.1 · 75,742–76,935 bp · +
ycf2 · NC_067707.1 · 85,430–92,233 bp · +
ycf15 · NC_067707.1 · 92,423–92,572 bp · +
trnV-GAC · NC_067707.1 · 98,913–98,984 bp · +
rrn16 · NC_067707.1 · 99,211–100,701 bp · +
trnI-GAU · NC_067707.1 · 100,999–102,017 bp · +
trnA-UGC · NC_067707.1 · 102,082–102,960 bp · +
rrn23 · NC_067707.1 · 103,124–105,934 bp · +
rrn4.5 · NC_067707.1 · 106,033–106,135 bp · +
rrn5 · NC_067707.1 · 106,391–106,511 bp · +
trnR-ACG · NC_067707.1 · 106,755–106,828 bp · +
ycf1 · NC_067707.1 · 107,813–108,943 bp · +
rpl32 · NC_067707.1 · 111,553–111,723 bp · +
trnL-UAG · NC_067707.1 · 112,481–112,560 bp · +
ccsA · NC_067707.1 · 112,648–113,619 bp · +
trnN-GUU · NC_067707.1 · 127,976–128,047 bp · +
rps7 · NC_067707.1 · 139,027–139,494 bp · +
ndhB · NC_067707.1 · 139,765–141,972 bp · +
trnL-CAA · NC_067707.1 · 142,535–142,620 bp · +
trnI-CAU · NC_067707.1 · 150,113–150,186 bp · +
rpl23 · NC_067707.1 · 150,352–150,633 bp · +
rpl2 · NC_067707.1 · 150,652–152,130 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon phyllopodus
ANNOTATED PLASTOME
NC_067707.1
152,240 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38060 76120 114180 152240 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK OOC27_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 317 1375 1059 Locate
trnK-UUU gene − 1607 4186 2580 Locate
matK gene − 1927 3447 1521 Locate
OOC27_pgp086 gene − 4725 5865 1141 Locate
trnQ-UUG gene − 6717 6788 72 Locate
psbK gene + 7183 7368 186 Locate
psbI gene + 7759 7869 111 Locate
trnS-GCU gene − 8024 8111 88 Locate
trnG-UCC gene + 8773 9532 760 Locate
trnR-UCU gene + 9722 9793 72 Locate
atpA gene − 9898 11421 1524 Locate
atpF gene − 11522 12768 1247 Locate
atpH gene − 13060 13305 246 Locate
atpI gene − 14250 14993 744 Locate
rps2 gene − 15219 15929 711 Locate
rpoC2 gene − 16144 20331 4188 Locate
rpoC1 gene − 20496 23329 2834 Locate
rpoB gene − 23356 26568 3213 Locate
trnC-GCA gene + 27760 27830 71 Locate
petN gene + 27993 28082 90 Locate
psbM gene − 29075 29179 105 Locate
trnD-GUC gene − 29698 29771 74 Locate
trnY-GUA gene − 29882 29965 84 Locate
trnE-UUC gene − 30043 30115 73 Locate
trnT-GGU gene + 30691 30762 72 Locate
psbD gene + 32135 33196 1062 Locate
psbC gene + 33144 34565 1422 Locate
trnS-UGA gene − 34801 34893 93 Locate
psbZ gene + 35234 35422 189 Locate
trnG-GCC gene + 35660 35730 71 Locate
trnfM-CAU gene − 35903 35976 74 Locate
rps14 gene − 36121 36423 303 Locate
psaB gene − 36546 38750 2205 Locate
psaA gene − 38776 41028 2253 Locate
ycf3 gene − 41827 43787 1961 Locate
trnS-GGA gene + 44633 44719 87 Locate
rps4 gene − 45016 45621 606 Locate
trnT-UGU gene − 46034 46106 73 Locate
trnL-UAA gene + 46801 47344 544 Locate
trnF-GAA gene + 47644 47716 73 Locate
ndhJ gene − 48395 48871 477 Locate
ndhK gene − 48982 49659 678 Locate
ndhC gene − 49711 50073 363 Locate
trnV-UAC gene − 51028 51685 658 Locate
trnM-CAU gene + 51866 51938 73 Locate
atpE gene − 52144 52545 402 Locate
atpB gene − 52542 54038 1497 Locate
rbcL gene + 54837 56282 1446 Locate
accD gene + 56965 58446 1482 Locate
psaI gene + 59144 59254 111 Locate
ycf4 gene + 59699 60253 555 Locate
cemA gene + 60839 61528 690 Locate
petA gene + 61743 62705 963 Locate
psbJ gene − 63711 63833 123 Locate
psbL gene − 63968 64084 117 Locate
psbF gene − 64108 64227 120 Locate
psbE gene − 64242 64493 252 Locate
petL gene + 65387 65482 96 Locate
petG gene + 65657 65770 114 Locate
trnW-CCA gene − 65893 65966 74 Locate
trnP-UGG gene − 66136 66209 74 Locate
psaJ gene + 66493 66627 135 Locate
rpl33 gene + 67075 67275 201 Locate
rps18 gene + 67442 67747 306 Locate
rpl20 gene − 67982 68368 387 Locate
rps12 gene − 69100 69213 114 Locate
clpP gene − 69332 71256 1925 Locate
psbB gene + 71729 73255 1527 Locate
psbT gene + 73440 73541 102 Locate
psbN gene − 73607 73738 132 Locate
psbH gene + 73844 74062 219 Locate
petB gene + 74197 75553 1357 Locate
petD gene + 75742 76935 1194 Locate
rpoA gene − 77112 78119 1008 Locate
rps11 gene − 78191 78607 417 Locate
rpl36 gene − 78717 78830 114 Locate
infA gene − 78926 79159 234 Locate
rps8 gene − 79285 79689 405 Locate
rpl14 gene − 79861 80229 369 Locate
rpl16 gene − 80366 81634 1269 Locate
rps3 gene − 81787 82449 663 Locate
rpl22 gene − 82434 82907 474 Locate
rps19 gene − 82972 83250 279 Locate
rpl2 gene − 83318 84796 1479 Locate
rpl23 gene − 84815 85096 282 Locate
trnI-CAU gene − 85262 85335 74 Locate
ycf2 gene + 85430 92233 6804 Locate
ycf15 gene + 92423 92572 150 Locate
trnL-CAA gene − 92833 92913 81 Locate
ndhB gene − 93476 95683 2208 Locate
rps7 gene − 95954 96421 468 Locate
rps12 gene − 96475 97258 784 Locate
trnV-GAC gene + 98913 98984 72 Locate
rrn16 gene + 99211 100701 1491 Locate
trnI-GAU gene + 100999 102017 1019 Locate
trnA-UGC gene + 102082 102960 879 Locate
rrn23 gene + 103124 105934 2811 Locate
rrn4.5 gene + 106033 106135 103 Locate
rrn5 gene + 106391 106511 121 Locate
trnR-ACG gene + 106755 106828 74 Locate
trnN-GUU gene − 107401 107472 72 Locate
ycf1 gene + 107813 108943 1131 Locate
ndhF gene − 108837 111068 2232 Locate
rpl32 gene + 111553 111723 171 Locate
trnL-UAG gene + 112481 112560 80 Locate
ccsA gene + 112648 113619 972 Locate
ndhD gene − 113843 115372 1530 Locate
psaC gene − 115463 115708 246 Locate
ndhE gene − 115964 116269 306 Locate
ndhG gene − 116484 117014 531 Locate
ndhI gene − 117383 117889 507 Locate
ndhA gene − 117970 120079 2110 Locate
ndhH gene − 120081 121262 1182 Locate
rps15 gene − 121377 121640 264 Locate
ycf1 gene − 122080 127635 5556 Locate
trnN-GUU gene + 127976 128047 72 Locate
trnR-ACG gene − 128620 128693 74 Locate
rrn5 gene − 128937 129057 121 Locate
rrn4.5 gene − 129313 129415 103 Locate
rrn23 gene − 129514 132324 2811 Locate
trnA-UGC gene − 132488 133366 879 Locate
trnI-GAU gene − 133431 134449 1019 Locate
rrn16 gene − 134747 136237 1491 Locate
trnV-GAC gene − 136464 136535 72 Locate
rps12 gene + 138190 138973 784 Locate
rps7 gene + 139027 139494 468 Locate
ndhB gene + 139765 141972 2208 Locate
trnL-CAA gene + 142535 142620 86 Locate
ycf15 gene − 142876 143025 150 Locate
ycf2 gene − 143215 150018 6804 Locate
trnI-CAU gene + 150113 150186 74 Locate
rpl23 gene + 150352 150633 282 Locate
rpl2 gene + 150652 152130 1479 Locate
Status Available
Accession NC_067707.1
Length 152,240 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources