Isodon racemosus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067698.1 · 11–85 bp · −
psbA · NC_067698.1 · 393–1,451 bp · −
trnK-UUU · NC_067698.1 · 1,683–4,263 bp · −
matK · NC_067698.1 · 2,003–3,523 bp · −
ON968_pgp086 · NC_067698.1 · 4,788–5,933 bp · −
trnQ-UUG · NC_067698.1 · 6,878–6,949 bp · −
trnS-GCU · NC_067698.1 · 8,183–8,270 bp · −
atpA · NC_067698.1 · 10,165–11,688 bp · −
atpF · NC_067698.1 · 11,794–13,039 bp · −
atpH · NC_067698.1 · 13,331–13,576 bp · −
atpI · NC_067698.1 · 14,578–15,321 bp · −
rps2 · NC_067698.1 · 15,547–16,257 bp · −
rpoC2 · NC_067698.1 · 16,473–20,654 bp · −
rpoC1 · NC_067698.1 · 20,819–23,652 bp · −
rpoB · NC_067698.1 · 23,679–26,891 bp · −
psbM · NC_067698.1 · 29,397–29,501 bp · −
trnD-GUC · NC_067698.1 · 30,020–30,093 bp · −
trnY-GUA · NC_067698.1 · 30,204–30,287 bp · −
trnE-UUC · NC_067698.1 · 30,365–30,437 bp · −
trnS-UGA · NC_067698.1 · 35,102–35,194 bp · −
trnfM-CAU · NC_067698.1 · 36,229–36,302 bp · −
rps14 · NC_067698.1 · 36,448–36,750 bp · −
psaB · NC_067698.1 · 36,873–39,077 bp · −
psaA · NC_067698.1 · 39,103–41,355 bp · −
ycf3 · NC_067698.1 · 42,130–44,077 bp · −
rps4 · NC_067698.1 · 45,324–45,929 bp · −
trnT-UGU · NC_067698.1 · 46,343–46,415 bp · −
ndhJ · NC_067698.1 · 48,700–49,176 bp · −
ndhK · NC_067698.1 · 49,287–49,964 bp · −
ndhC · NC_067698.1 · 50,016–50,378 bp · −
trnV-UAC · NC_067698.1 · 51,341–51,997 bp · −
atpE · NC_067698.1 · 52,451–52,852 bp · −
atpB · NC_067698.1 · 52,849–54,345 bp · −
psbJ · NC_067698.1 · 64,068–64,190 bp · −
psbL · NC_067698.1 · 64,325–64,441 bp · −
psbF · NC_067698.1 · 64,465–64,584 bp · −
psbE · NC_067698.1 · 64,599–64,850 bp · −
trnW-CCA · NC_067698.1 · 66,249–66,322 bp · −
trnP-UGG · NC_067698.1 · 66,491–66,564 bp · −
rpl20 · NC_067698.1 · 68,349–68,735 bp · −
rps12 · NC_067698.1 · 69,467–69,580 bp · −
rps12 · NC_067698.1 · 96,872–97,664 bp · −
clpP · NC_067698.1 · 69,699–71,613 bp · −
psbN · NC_067698.1 · 73,963–74,094 bp · −
rpoA · NC_067698.1 · 77,468–78,475 bp · −
rps11 · NC_067698.1 · 78,547–78,963 bp · −
rpl36 · NC_067698.1 · 79,079–79,192 bp · −
infA · NC_067698.1 · 79,288–79,521 bp · −
rps8 · NC_067698.1 · 79,648–80,052 bp · −
rpl14 · NC_067698.1 · 80,235–80,603 bp · −
rpl16 · NC_067698.1 · 80,737–82,004 bp · −
rps3 · NC_067698.1 · 82,148–82,810 bp · −
rpl22 · NC_067698.1 · 82,795–83,268 bp · −
rps19 · NC_067698.1 · 83,333–83,611 bp · −
rpl2 · NC_067698.1 · 83,679–85,157 bp · −
rpl23 · NC_067698.1 · 85,176–85,457 bp · −
trnI-CAU · NC_067698.1 · 85,623–85,696 bp · −
trnL-CAA · NC_067698.1 · 93,221–93,301 bp · −
ndhB · NC_067698.1 · 93,873–96,080 bp · −
rps7 · NC_067698.1 · 96,351–96,818 bp · −
trnN-GUU · NC_067698.1 · 107,812–107,883 bp · −
ndhF · NC_067698.1 · 109,249–111,480 bp · −
ndhD · NC_067698.1 · 114,256–115,785 bp · −
psaC · NC_067698.1 · 115,876–116,121 bp · −
ndhE · NC_067698.1 · 116,377–116,682 bp · −
ndhG · NC_067698.1 · 116,897–117,427 bp · −
ndhI · NC_067698.1 · 117,786–118,292 bp · −
ndhA · NC_067698.1 · 118,373–120,505 bp · −
ndhH · NC_067698.1 · 120,507–121,688 bp · −
rps15 · NC_067698.1 · 121,803–122,075 bp · −
ycf1 · NC_067698.1 · 122,505–128,027 bp · −
trnR-ACG · NC_067698.1 · 129,003–129,076 bp · −
rrn5 · NC_067698.1 · 129,320–129,440 bp · −
rrn4.5 · NC_067698.1 · 129,696–129,798 bp · −
rrn23 · NC_067698.1 · 129,897–132,707 bp · −
trnA-UGC · NC_067698.1 · 132,879–133,757 bp · −
trnI-GAU · NC_067698.1 · 133,822–134,840 bp · −
rrn16 · NC_067698.1 · 135,138–136,628 bp · −
trnV-GAC · NC_067698.1 · 136,855–136,926 bp · −
ycf15 · NC_067698.1 · 143,292–143,441 bp · −
ycf2 · NC_067698.1 · 143,631–150,461 bp · −
psbK · NC_067698.1 · 7,343–7,528 bp · +
psbI · NC_067698.1 · 7,916–8,026 bp · +
trnG-UCC · NC_067698.1 · 9,040–9,799 bp · +
trnR-UCU · NC_067698.1 · 9,990–10,061 bp · +
trnC-GCA · NC_067698.1 · 28,081–28,151 bp · +
petN · NC_067698.1 · 28,314–28,403 bp · +
trnT-GGU · NC_067698.1 · 31,047–31,118 bp · +
psbD · NC_067698.1 · 32,436–33,497 bp · +
psbC · NC_067698.1 · 33,445–34,866 bp · +
psbZ · NC_067698.1 · 35,535–35,723 bp · +
trnG-GCC · NC_067698.1 · 35,968–36,038 bp · +
trnS-GGA · NC_067698.1 · 44,941–45,027 bp · +
trnL-UAA · NC_067698.1 · 47,102–47,666 bp · +
trnF-GAA · NC_067698.1 · 47,960–48,032 bp · +
trnM-CAU · NC_067698.1 · 52,178–52,250 bp · +
rbcL · NC_067698.1 · 55,137–56,570 bp · +
accD · NC_067698.1 · 57,281–58,762 bp · +
psaI · NC_067698.1 · 59,462–59,572 bp · +
ycf4 · NC_067698.1 · 60,019–60,573 bp · +
cemA · NC_067698.1 · 61,164–61,853 bp · +
petA · NC_067698.1 · 62,068–63,030 bp · +
petL · NC_067698.1 · 65,743–65,838 bp · +
petG · NC_067698.1 · 66,013–66,126 bp · +
psaJ · NC_067698.1 · 66,846–66,980 bp · +
rpl33 · NC_067698.1 · 67,442–67,642 bp · +
rps18 · NC_067698.1 · 67,809–68,114 bp · +
rps12 · NC_067698.1 · 138,588–139,380 bp · +
psbB · NC_067698.1 · 72,086–73,612 bp · +
psbT · NC_067698.1 · 73,796–73,897 bp · +
psbH · NC_067698.1 · 74,200–74,418 bp · +
petB · NC_067698.1 · 74,544–75,910 bp · +
petD · NC_067698.1 · 76,099–77,291 bp · +
ycf2 · NC_067698.1 · 85,791–92,621 bp · +
ycf15 · NC_067698.1 · 92,811–92,960 bp · +
trnV-GAC · NC_067698.1 · 99,326–99,397 bp · +
rrn16 · NC_067698.1 · 99,624–101,114 bp · +
trnI-GAU · NC_067698.1 · 101,412–102,430 bp · +
trnA-UGC · NC_067698.1 · 102,495–103,373 bp · +
rrn23 · NC_067698.1 · 103,545–106,355 bp · +
rrn4.5 · NC_067698.1 · 106,454–106,556 bp · +
rrn5 · NC_067698.1 · 106,812–106,932 bp · +
trnR-ACG · NC_067698.1 · 107,176–107,249 bp · +
ycf1 · NC_067698.1 · 108,225–109,355 bp · +
rpl32 · NC_067698.1 · 111,948–112,118 bp · +
trnL-UAG · NC_067698.1 · 112,884–112,963 bp · +
ccsA · NC_067698.1 · 113,052–114,023 bp · +
trnN-GUU · NC_067698.1 · 128,369–128,440 bp · +
rps7 · NC_067698.1 · 139,434–139,901 bp · +
ndhB · NC_067698.1 · 140,172–142,379 bp · +
trnL-CAA · NC_067698.1 · 142,951–143,031 bp · +
trnI-CAU · NC_067698.1 · 150,556–150,629 bp · +
rpl23 · NC_067698.1 · 150,795–151,076 bp · +
rpl2 · NC_067698.1 · 151,095–152,573 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon racemosus
ANNOTATED PLASTOME
NC_067698.1
152,683 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38171 76342 114512 152683 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK ON968_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1683 4263 2581 Locate
matK gene − 2003 3523 1521 Locate
ON968_pgp086 gene − 4788 5933 1146 Locate
trnQ-UUG gene − 6878 6949 72 Locate
psbK gene + 7343 7528 186 Locate
psbI gene + 7916 8026 111 Locate
trnS-GCU gene − 8183 8270 88 Locate
trnG-UCC gene + 9040 9799 760 Locate
trnR-UCU gene + 9990 10061 72 Locate
atpA gene − 10165 11688 1524 Locate
atpF gene − 11794 13039 1246 Locate
atpH gene − 13331 13576 246 Locate
atpI gene − 14578 15321 744 Locate
rps2 gene − 15547 16257 711 Locate
rpoC2 gene − 16473 20654 4182 Locate
rpoC1 gene − 20819 23652 2834 Locate
rpoB gene − 23679 26891 3213 Locate
trnC-GCA gene + 28081 28151 71 Locate
petN gene + 28314 28403 90 Locate
psbM gene − 29397 29501 105 Locate
trnD-GUC gene − 30020 30093 74 Locate
trnY-GUA gene − 30204 30287 84 Locate
trnE-UUC gene − 30365 30437 73 Locate
trnT-GGU gene + 31047 31118 72 Locate
psbD gene + 32436 33497 1062 Locate
psbC gene + 33445 34866 1422 Locate
trnS-UGA gene − 35102 35194 93 Locate
psbZ gene + 35535 35723 189 Locate
trnG-GCC gene + 35968 36038 71 Locate
trnfM-CAU gene − 36229 36302 74 Locate
rps14 gene − 36448 36750 303 Locate
psaB gene − 36873 39077 2205 Locate
psaA gene − 39103 41355 2253 Locate
ycf3 gene − 42130 44077 1948 Locate
trnS-GGA gene + 44941 45027 87 Locate
rps4 gene − 45324 45929 606 Locate
trnT-UGU gene − 46343 46415 73 Locate
trnL-UAA gene + 47102 47666 565 Locate
trnF-GAA gene + 47960 48032 73 Locate
ndhJ gene − 48700 49176 477 Locate
ndhK gene − 49287 49964 678 Locate
ndhC gene − 50016 50378 363 Locate
trnV-UAC gene − 51341 51997 657 Locate
trnM-CAU gene + 52178 52250 73 Locate
atpE gene − 52451 52852 402 Locate
atpB gene − 52849 54345 1497 Locate
rbcL gene + 55137 56570 1434 Locate
accD gene + 57281 58762 1482 Locate
psaI gene + 59462 59572 111 Locate
ycf4 gene + 60019 60573 555 Locate
cemA gene + 61164 61853 690 Locate
petA gene + 62068 63030 963 Locate
psbJ gene − 64068 64190 123 Locate
psbL gene − 64325 64441 117 Locate
psbF gene − 64465 64584 120 Locate
psbE gene − 64599 64850 252 Locate
petL gene + 65743 65838 96 Locate
petG gene + 66013 66126 114 Locate
trnW-CCA gene − 66249 66322 74 Locate
trnP-UGG gene − 66491 66564 74 Locate
psaJ gene + 66846 66980 135 Locate
rpl33 gene + 67442 67642 201 Locate
rps18 gene + 67809 68114 306 Locate
rpl20 gene − 68349 68735 387 Locate
rps12 gene − 69467 69580 114 Locate
clpP gene − 69699 71613 1915 Locate
psbB gene + 72086 73612 1527 Locate
psbT gene + 73796 73897 102 Locate
psbN gene − 73963 74094 132 Locate
psbH gene + 74200 74418 219 Locate
petB gene + 74544 75910 1367 Locate
petD gene + 76099 77291 1193 Locate
rpoA gene − 77468 78475 1008 Locate
rps11 gene − 78547 78963 417 Locate
rpl36 gene − 79079 79192 114 Locate
infA gene − 79288 79521 234 Locate
rps8 gene − 79648 80052 405 Locate
rpl14 gene − 80235 80603 369 Locate
rpl16 gene − 80737 82004 1268 Locate
rps3 gene − 82148 82810 663 Locate
rpl22 gene − 82795 83268 474 Locate
rps19 gene − 83333 83611 279 Locate
rpl2 gene − 83679 85157 1479 Locate
rpl23 gene − 85176 85457 282 Locate
trnI-CAU gene − 85623 85696 74 Locate
ycf2 gene + 85791 92621 6831 Locate
ycf15 gene + 92811 92960 150 Locate
trnL-CAA gene − 93221 93301 81 Locate
ndhB gene − 93873 96080 2208 Locate
rps7 gene − 96351 96818 468 Locate
rps12 gene − 96872 97664 793 Locate
trnV-GAC gene + 99326 99397 72 Locate
rrn16 gene + 99624 101114 1491 Locate
trnI-GAU gene + 101412 102430 1019 Locate
trnA-UGC gene + 102495 103373 879 Locate
rrn23 gene + 103545 106355 2811 Locate
rrn4.5 gene + 106454 106556 103 Locate
rrn5 gene + 106812 106932 121 Locate
trnR-ACG gene + 107176 107249 74 Locate
trnN-GUU gene − 107812 107883 72 Locate
ycf1 gene + 108225 109355 1131 Locate
ndhF gene − 109249 111480 2232 Locate
rpl32 gene + 111948 112118 171 Locate
trnL-UAG gene + 112884 112963 80 Locate
ccsA gene + 113052 114023 972 Locate
ndhD gene − 114256 115785 1530 Locate
psaC gene − 115876 116121 246 Locate
ndhE gene − 116377 116682 306 Locate
ndhG gene − 116897 117427 531 Locate
ndhI gene − 117786 118292 507 Locate
ndhA gene − 118373 120505 2133 Locate
ndhH gene − 120507 121688 1182 Locate
rps15 gene − 121803 122075 273 Locate
ycf1 gene − 122505 128027 5523 Locate
trnN-GUU gene + 128369 128440 72 Locate
trnR-ACG gene − 129003 129076 74 Locate
rrn5 gene − 129320 129440 121 Locate
rrn4.5 gene − 129696 129798 103 Locate
rrn23 gene − 129897 132707 2811 Locate
trnA-UGC gene − 132879 133757 879 Locate
trnI-GAU gene − 133822 134840 1019 Locate
rrn16 gene − 135138 136628 1491 Locate
trnV-GAC gene − 136855 136926 72 Locate
rps12 gene + 138588 139380 793 Locate
rps7 gene + 139434 139901 468 Locate
ndhB gene + 140172 142379 2208 Locate
trnL-CAA gene + 142951 143031 81 Locate
ycf15 gene − 143292 143441 150 Locate
ycf2 gene − 143631 150461 6831 Locate
trnI-CAU gene + 150556 150629 74 Locate
rpl23 gene + 150795 151076 282 Locate
rpl2 gene + 151095 152573 1479 Locate
Status Available
Accession NC_067698.1
Length 152,683 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources