Coordinate-aware organelle record

Isodon rugosiformis chloroplast genome

Available NC_067679.1 152,650 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	387	1446	1059
trnK-UUU	gene	translation-rna	−	1677	4258	2581
matK	gene	other	−	1997	3518	1521
OOC23_pgp086	gene	other	−	4784	5930	1146
trnQ-UUG	gene	translation-rna	−	6874	6946	72
psbK	gene	photosystem-ii	+	7339	7525	186
psbI	gene	photosystem-ii	+	7912	8023	111
trnS-GCU	gene	translation-rna	−	8178	8266	88
trnG-UCC	gene	translation-rna	+	9035	9795	760
trnR-UCU	gene	translation-rna	+	9985	10057	72
atpA	gene	atp-synthase	−	10160	11684	1524
atpF	gene	atp-synthase	−	11788	13034	1246
atpH	gene	atp-synthase	−	13325	13571	246
atpI	gene	atp-synthase	−	14571	15315	744
rps2	gene	ribosomal-protein	−	15540	16251	711
rpoC2	gene	rna-polymerase	−	16467	20649	4182
rpoC1	gene	rna-polymerase	−	20813	23647	2834
rpoB	gene	rna-polymerase	−	23673	26886	3213
trnC-GCA	gene	translation-rna	+	28068	28139	71
petN	gene	cytochrome	+	28301	28391	90
psbM	gene	photosystem-ii	−	29382	29487	105
trnD-GUC	gene	translation-rna	−	30005	30079	74
trnY-GUA	gene	translation-rna	−	30189	30273	84
trnE-UUC	gene	translation-rna	−	30351	30424	73
trnT-GGU	gene	translation-rna	+	31003	31075	72
psbD	gene	photosystem-ii	+	32392	33454	1062
psbC	gene	photosystem-ii	+	33401	34823	1422
trnS-UGA	gene	translation-rna	−	35058	35151	93
psbZ	gene	photosystem-ii	+	35491	35680	189
trnG-GCC	gene	translation-rna	+	35924	35995	71
trnfM-CAU	gene	translation-rna	−	36183	36257	74
rps14	gene	ribosomal-protein	−	36402	36705	303
psaB	gene	photosystem-i	−	36827	39032	2205
psaA	gene	photosystem-i	−	39057	41310	2253
ycf3	gene	other	−	42083	44030	1947
trnS-GGA	gene	translation-rna	+	44893	44980	87
rps4	gene	ribosomal-protein	−	45276	45882	606
trnT-UGU	gene	translation-rna	−	46306	46379	73
trnL-UAA	gene	translation-rna	+	47065	47630	565
trnF-GAA	gene	translation-rna	+	47922	47995	73
ndhJ	gene	nad-dehydrogenase	−	48662	49139	477
ndhK	gene	nad-dehydrogenase	−	49285	49927	642
ndhC	gene	nad-dehydrogenase	−	49978	50341	363
trnV-UAC	gene	translation-rna	−	51297	51953	656
trnM-CAU	gene	translation-rna	+	52133	52206	73
atpE	gene	atp-synthase	−	52406	52808	402
atpB	gene	atp-synthase	−	52804	54301	1497
rbcL	gene	other	+	55090	56524	1434
accD	gene	other	+	57228	58710	1482
psaI	gene	photosystem-i	+	59410	59521	111
ycf4	gene	other	+	59968	60523	555
cemA	gene	other	+	61113	61803	690
petA	gene	cytochrome	+	62017	62980	963
psbJ	gene	photosystem-ii	−	64017	64140	123
psbL	gene	photosystem-ii	−	64274	64391	117
psbF	gene	photosystem-ii	−	64414	64534	120
psbE	gene	photosystem-ii	−	64548	64800	252
petL	gene	cytochrome	+	65692	65788	96
petG	gene	cytochrome	+	65962	66076	114
trnW-CCA	gene	translation-rna	−	66198	66272	74
trnP-UGG	gene	translation-rna	−	66440	66514	74
psaJ	gene	photosystem-i	+	66800	66935	135
rpl33	gene	ribosomal-protein	+	67397	67598	201
rps18	gene	ribosomal-protein	+	67764	68070	306
rpl20	gene	ribosomal-protein	−	68305	68692	387
rps12	gene	ribosomal-protein	−	69424	97625	28201
rps12	gene	ribosomal-protein	+	69424	139347	69923
clpP	gene	other	−	69656	71572	1916
psbB	gene	photosystem-ii	+	72044	73571	1527
psbT	gene	photosystem-ii	+	73754	73856	102
psbN	gene	photosystem-ii	−	73921	74053	132
psbH	gene	photosystem-ii	+	74158	74377	219
petB	gene	cytochrome	+	74502	75870	1368
petD	gene	cytochrome	+	76058	77251	1193
rpoA	gene	rna-polymerase	−	77427	78435	1008
rps11	gene	ribosomal-protein	−	78506	78923	417
rpl36	gene	ribosomal-protein	−	79038	79152	114
infA	gene	other	−	79247	79481	234
rps8	gene	ribosomal-protein	−	79608	80013	405
rpl14	gene	ribosomal-protein	−	80195	80564	369
rpl16	gene	ribosomal-protein	−	80697	81965	1268
rps3	gene	ribosomal-protein	−	82108	82771	663
rpl22	gene	ribosomal-protein	−	82755	83229	474
rps19	gene	ribosomal-protein	−	83293	83572	279
rpl2	gene	ribosomal-protein	−	83639	85118	1479
rpl23	gene	ribosomal-protein	−	85136	85418	282
trnI-CAU	gene	translation-rna	−	85583	85657	74
ycf2	gene	other	+	85751	92582	6831
ycf15	gene	other	+	92771	92921	150
trnL-CAA	gene	translation-rna	−	93181	93262	81
ndhB	gene	nad-dehydrogenase	−	93833	96041	2208
rps7	gene	ribosomal-protein	−	96311	96779	468
trnV-GAC	gene	translation-rna	+	99286	99358	72
rrn16	gene	ribosomal-rna	+	99584	101075	1491
trnI-GAU	gene	translation-rna	+	101372	102391	1019
trnA-UGC	gene	translation-rna	+	102455	103334	879
rrn23	gene	ribosomal-rna	+	103505	106316	2811
rrn4.5	gene	ribosomal-rna	+	106414	106517	103
rrn5	gene	ribosomal-rna	+	106772	106893	121
trnR-ACG	gene	translation-rna	+	107136	107210	74
trnN-GUU	gene	translation-rna	−	107776	107848	72
ycf1	gene	other	+	108189	109320	1131
ndhF	gene	nad-dehydrogenase	−	109213	111445	2232
rpl32	gene	ribosomal-protein	+	111920	112091	171
trnL-UAG	gene	translation-rna	+	112855	112935	80
ccsA	gene	other	+	113023	113995	972
ndhD	gene	nad-dehydrogenase	−	114227	115757	1530
psaC	gene	photosystem-i	−	115847	116093	246
ndhE	gene	nad-dehydrogenase	−	116348	116654	306
ndhG	gene	nad-dehydrogenase	−	116868	117399	531
ndhI	gene	nad-dehydrogenase	−	117757	118264	507
ndhA	gene	nad-dehydrogenase	−	118344	120468	2124
ndhH	gene	nad-dehydrogenase	−	120469	121651	1182
rps15	gene	ribosomal-protein	−	121765	122038	273
ycf1	gene	other	−	122467	127990	5523
trnN-GUU	gene	translation-rna	+	128331	128403	72
trnR-ACG	gene	translation-rna	−	128969	129043	74
rrn5	gene	ribosomal-rna	−	129286	129407	121
rrn4.5	gene	ribosomal-rna	−	129662	129765	103
rrn23	gene	ribosomal-rna	−	129863	132674	2811
trnA-UGC	gene	translation-rna	−	132845	133724	879
trnI-GAU	gene	translation-rna	−	133788	134807	1019
rrn16	gene	ribosomal-rna	−	135104	136595	1491
trnV-GAC	gene	translation-rna	−	136821	136893	72
rps7	gene	ribosomal-protein	+	139400	139868	468
ndhB	gene	nad-dehydrogenase	+	140138	142346	2208
trnL-CAA	gene	translation-rna	+	142917	142998	81
ycf15	gene	other	−	143258	143408	150
ycf2	gene	other	−	143597	150428	6831
trnI-CAU	gene	translation-rna	+	150522	150596	74
rpl23	gene	ribosomal-protein	+	150761	151043	282
rpl2	gene	ribosomal-protein	+	151061	152540	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_067679.1DNA · accDNC_067679DNA · atpBNC_067679DNA · matKNC_067679DNA · ndhFNC_067679DNA · psbANC_067679DNA · rbcLNC_067679DNA · rps12NC_067679DNA · ycf1NC_067679