Coordinate-aware organelle record

Isodon rugosus chloroplast genome

Available NC_067680.1 152,677 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	387	1446	1059
trnK-UUU	gene	translation-rna	−	1677	4258	2581
matK	gene	other	−	1997	3518	1521
ON946_pgp086	gene	other	−	4783	5929	1146
trnQ-UUG	gene	translation-rna	−	6872	6944	72
psbK	gene	photosystem-ii	+	7337	7523	186
psbI	gene	photosystem-ii	+	7910	8021	111
trnS-GCU	gene	translation-rna	−	8175	8263	88
trnG-UCC	gene	translation-rna	+	9032	9792	760
trnR-UCU	gene	translation-rna	+	9982	10054	72
atpA	gene	atp-synthase	−	10157	11681	1524
atpF	gene	atp-synthase	−	11791	13037	1246
atpH	gene	atp-synthase	−	13328	13574	246
atpI	gene	atp-synthase	−	14574	15318	744
rps2	gene	ribosomal-protein	−	15543	16254	711
rpoC2	gene	rna-polymerase	−	16470	20652	4182
rpoC1	gene	rna-polymerase	−	20816	23650	2834
rpoB	gene	rna-polymerase	−	23676	26889	3213
trnC-GCA	gene	translation-rna	+	28071	28142	71
petN	gene	cytochrome	+	28304	28394	90
psbM	gene	photosystem-ii	−	29385	29490	105
trnD-GUC	gene	translation-rna	−	30008	30082	74
trnY-GUA	gene	translation-rna	−	30192	30276	84
trnE-UUC	gene	translation-rna	−	30353	30426	73
trnT-GGU	gene	translation-rna	+	31035	31107	72
psbD	gene	photosystem-ii	+	32424	33486	1062
psbC	gene	photosystem-ii	+	33433	34855	1422
trnS-UGA	gene	translation-rna	−	35090	35183	93
psbZ	gene	photosystem-ii	+	35523	35712	189
trnG-GCC	gene	translation-rna	+	35956	36027	71
trnfM-CAU	gene	translation-rna	−	36216	36290	74
rps14	gene	ribosomal-protein	−	36435	36738	303
psaB	gene	photosystem-i	−	36860	39065	2205
psaA	gene	photosystem-i	−	39090	41343	2253
ycf3	gene	other	−	42110	44057	1947
trnS-GGA	gene	translation-rna	+	44920	45007	87
rps4	gene	ribosomal-protein	−	45303	45909	606
trnT-UGU	gene	translation-rna	−	46332	46405	73
trnL-UAA	gene	translation-rna	+	47090	47655	565
trnF-GAA	gene	translation-rna	+	47948	48021	73
ndhJ	gene	nad-dehydrogenase	−	48688	49165	477
ndhK	gene	nad-dehydrogenase	−	49311	49953	642
ndhC	gene	nad-dehydrogenase	−	50004	50367	363
trnV-UAC	gene	translation-rna	−	51323	51979	656
trnM-CAU	gene	translation-rna	+	52159	52232	73
atpE	gene	atp-synthase	−	52432	52834	402
atpB	gene	atp-synthase	−	52830	54327	1497
rbcL	gene	other	+	55118	56552	1434
accD	gene	other	+	57256	58738	1482
psaI	gene	photosystem-i	+	59438	59549	111
ycf4	gene	other	+	59995	60550	555
cemA	gene	other	+	61140	61830	690
petA	gene	cytochrome	+	62044	63007	963
psbJ	gene	photosystem-ii	−	64043	64166	123
psbL	gene	photosystem-ii	−	64300	64417	117
psbF	gene	photosystem-ii	−	64440	64560	120
psbE	gene	photosystem-ii	−	64574	64826	252
petL	gene	cytochrome	+	65718	65814	96
petG	gene	cytochrome	+	65988	66102	114
trnW-CCA	gene	translation-rna	−	66224	66298	74
trnP-UGG	gene	translation-rna	−	66466	66540	74
psaJ	gene	photosystem-i	+	66826	66961	135
rpl33	gene	ribosomal-protein	+	67423	67624	201
rps18	gene	ribosomal-protein	+	67790	68096	306
rpl20	gene	ribosomal-protein	−	68331	68718	387
rps12	gene	ribosomal-protein	−	69451	97651	28200
rps12	gene	ribosomal-protein	+	69451	139373	69922
clpP	gene	other	−	69683	71599	1916
psbB	gene	photosystem-ii	+	72071	73598	1527
psbT	gene	photosystem-ii	+	73780	73882	102
psbN	gene	photosystem-ii	−	73947	74079	132
psbH	gene	photosystem-ii	+	74184	74403	219
petB	gene	cytochrome	+	74528	75896	1368
petD	gene	cytochrome	+	76084	77277	1193
rpoA	gene	rna-polymerase	−	77453	78461	1008
rps11	gene	ribosomal-protein	−	78532	78949	417
rpl36	gene	ribosomal-protein	−	79064	79178	114
infA	gene	other	−	79273	79507	234
rps8	gene	ribosomal-protein	−	79633	80038	405
rpl14	gene	ribosomal-protein	−	80220	80589	369
rpl16	gene	ribosomal-protein	−	80722	81990	1268
rps3	gene	ribosomal-protein	−	82133	82796	663
rpl22	gene	ribosomal-protein	−	82780	83254	474
rps19	gene	ribosomal-protein	−	83318	83597	279
rpl2	gene	ribosomal-protein	−	83665	85144	1479
rpl23	gene	ribosomal-protein	−	85162	85444	282
trnI-CAU	gene	translation-rna	−	85609	85683	74
ycf2	gene	other	+	85777	92608	6831
ycf15	gene	other	+	92797	92947	150
trnL-CAA	gene	translation-rna	−	93207	93288	81
ndhB	gene	nad-dehydrogenase	−	93859	96067	2208
rps7	gene	ribosomal-protein	−	96337	96805	468
trnV-GAC	gene	translation-rna	+	99312	99384	72
rrn16	gene	ribosomal-rna	+	99610	101101	1491
trnI-GAU	gene	translation-rna	+	101398	102417	1019
trnA-UGC	gene	translation-rna	+	102481	103360	879
rrn23	gene	ribosomal-rna	+	103531	106342	2811
rrn4.5	gene	ribosomal-rna	+	106440	106543	103
rrn5	gene	ribosomal-rna	+	106798	106919	121
trnR-ACG	gene	translation-rna	+	107162	107236	74
trnN-GUU	gene	translation-rna	−	107802	107874	72
ycf1	gene	other	+	108215	109346	1131
ndhF	gene	nad-dehydrogenase	−	109239	111471	2232
rpl32	gene	ribosomal-protein	+	111946	112117	171
trnL-UAG	gene	translation-rna	+	112881	112961	80
ccsA	gene	other	+	113049	114021	972
ndhD	gene	nad-dehydrogenase	−	114253	115783	1530
psaC	gene	photosystem-i	−	115873	116119	246
ndhE	gene	nad-dehydrogenase	−	116374	116680	306
ndhG	gene	nad-dehydrogenase	−	116894	117425	531
ndhI	gene	nad-dehydrogenase	−	117783	118290	507
ndhA	gene	nad-dehydrogenase	−	118370	120494	2124
ndhH	gene	nad-dehydrogenase	−	120495	121677	1182
rps15	gene	ribosomal-protein	−	121791	122064	273
ycf1	gene	other	−	122493	128016	5523
trnN-GUU	gene	translation-rna	+	128357	128429	72
trnR-ACG	gene	translation-rna	−	128995	129069	74
rrn5	gene	ribosomal-rna	−	129312	129433	121
rrn4.5	gene	ribosomal-rna	−	129688	129791	103
rrn23	gene	ribosomal-rna	−	129889	132700	2811
trnA-UGC	gene	translation-rna	−	132871	133750	879
trnI-GAU	gene	translation-rna	−	133814	134833	1019
rrn16	gene	ribosomal-rna	−	135130	136621	1491
trnV-GAC	gene	translation-rna	−	136847	136919	72
rps7	gene	ribosomal-protein	+	139426	139894	468
ndhB	gene	nad-dehydrogenase	+	140164	142372	2208
trnL-CAA	gene	translation-rna	+	142943	143024	81
ycf15	gene	other	−	143284	143434	150
ycf2	gene	other	−	143623	150454	6831
trnI-CAU	gene	translation-rna	+	150548	150622	74
rpl23	gene	ribosomal-protein	+	150787	151069	282
rpl2	gene	ribosomal-protein	+	151087	152566	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_067680.1DNA · accDNC_067680DNA · atpBNC_067680DNA · matKNC_067680DNA · ndhFNC_067680DNA · psbANC_067680DNA · rbcLNC_067680DNA · rps12NC_067680DNA · ycf1NC_067680