Coordinate-aware organelle record

Isodon schimperi chloroplast genome

Available NC_067708.1 152,450 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	389	1448	1059
trnK-UUU	gene	translation-rna	−	1679	4255	2576
matK	gene	other	−	1999	3520	1521
ON844_pgp086	gene	other	−	4783	5917	1134
trnQ-UUG	gene	translation-rna	−	6863	6935	72
psbK	gene	photosystem-ii	+	7328	7514	186
psbI	gene	photosystem-ii	+	7903	8014	111
trnS-GCU	gene	translation-rna	−	8168	8256	88
trnG-UCC	gene	translation-rna	+	9013	9772	759
trnR-UCU	gene	translation-rna	+	9956	10028	72
atpA	gene	atp-synthase	−	10132	11656	1524
atpF	gene	atp-synthase	−	11765	13011	1246
atpH	gene	atp-synthase	−	13302	13548	246
atpI	gene	atp-synthase	−	14517	15261	744
rps2	gene	ribosomal-protein	−	15489	16200	711
rpoC2	gene	rna-polymerase	−	16413	20595	4182
rpoC1	gene	rna-polymerase	−	20759	23591	2832
rpoB	gene	rna-polymerase	−	23617	26830	3213
trnC-GCA	gene	translation-rna	+	28011	28082	71
petN	gene	cytochrome	+	28243	28333	90
psbM	gene	photosystem-ii	−	29320	29425	105
trnD-GUC	gene	translation-rna	−	29938	30012	74
trnY-GUA	gene	translation-rna	−	30122	30206	84
trnE-UUC	gene	translation-rna	−	30283	30356	73
trnT-GGU	gene	translation-rna	+	30941	31013	72
psbD	gene	photosystem-ii	+	32394	33456	1062
psbC	gene	photosystem-ii	+	33403	34825	1422
trnS-UGA	gene	translation-rna	−	35062	35155	93
psbZ	gene	photosystem-ii	+	35495	35684	189
trnG-GCC	gene	translation-rna	+	35928	35999	71
trnfM-CAU	gene	translation-rna	−	36167	36241	74
rps14	gene	ribosomal-protein	−	36385	36688	303
psaB	gene	photosystem-i	−	36809	39014	2205
psaA	gene	photosystem-i	−	39039	41292	2253
ycf3	gene	other	−	42081	44030	1949
trnS-GGA	gene	translation-rna	+	44878	44965	87
rps4	gene	ribosomal-protein	−	45256	45862	606
trnT-UGU	gene	translation-rna	−	46257	46330	73
trnL-UAA	gene	translation-rna	+	47015	47559	544
trnF-GAA	gene	translation-rna	+	47850	47923	73
ndhJ	gene	nad-dehydrogenase	−	48579	49056	477
ndhK	gene	nad-dehydrogenase	−	49166	49844	678
ndhC	gene	nad-dehydrogenase	−	49895	50258	363
trnV-UAC	gene	translation-rna	−	51204	51860	656
trnM-CAU	gene	translation-rna	+	52040	52113	73
atpE	gene	atp-synthase	−	52312	52714	402
atpB	gene	atp-synthase	−	52710	54207	1497
rbcL	gene	other	+	55005	56439	1434
accD	gene	other	+	57150	58632	1482
psaI	gene	photosystem-i	+	59327	59438	111
ycf4	gene	other	+	59892	60447	555
cemA	gene	other	+	60967	61657	690
petA	gene	cytochrome	+	61871	62834	963
psbJ	gene	photosystem-ii	−	63873	63996	123
psbL	gene	photosystem-ii	−	64130	64247	117
psbF	gene	photosystem-ii	−	64270	64390	120
psbE	gene	photosystem-ii	−	64404	64656	252
petL	gene	cytochrome	+	65540	65636	96
petG	gene	cytochrome	+	65810	65924	114
trnW-CCA	gene	translation-rna	−	66046	66120	74
trnP-UGG	gene	translation-rna	−	66288	66362	74
psaJ	gene	photosystem-i	+	66645	66780	135
rpl33	gene	ribosomal-protein	+	67230	67431	201
rps18	gene	ribosomal-protein	+	67597	67903	306
rpl20	gene	ribosomal-protein	−	68139	68526	387
rps12	gene	ribosomal-protein	−	69257	97401	28144
rps12	gene	ribosomal-protein	+	69257	139137	69880
clpP	gene	other	−	69488	71400	1912
psbB	gene	photosystem-ii	+	71872	73399	1527
psbT	gene	photosystem-ii	+	73585	73687	102
psbN	gene	photosystem-ii	−	73752	73884	132
psbH	gene	photosystem-ii	+	73989	74208	219
petB	gene	cytochrome	+	74342	75728	1386
petD	gene	cytochrome	+	75916	77109	1193
rpoA	gene	rna-polymerase	−	77285	78293	1008
rps11	gene	ribosomal-protein	−	78364	78781	417
rpl36	gene	ribosomal-protein	−	78896	79010	114
infA	gene	other	−	79105	79339	234
rps8	gene	ribosomal-protein	−	79467	79872	405
rpl14	gene	ribosomal-protein	−	80043	80412	369
rpl16	gene	ribosomal-protein	−	80545	81730	1185
rps3	gene	ribosomal-protein	−	81873	82536	663
rpl22	gene	ribosomal-protein	−	82520	82994	474
rps19	gene	ribosomal-protein	−	83058	83337	279
rpl2	gene	ribosomal-protein	−	83405	84884	1479
rpl23	gene	ribosomal-protein	−	84902	85184	282
trnI-CAU	gene	translation-rna	−	85349	85423	74
ycf2	gene	other	+	85517	92357	6840
ycf15	gene	other	+	92546	92696	150
trnL-CAA	gene	translation-rna	−	92956	93037	81
ndhB	gene	nad-dehydrogenase	−	93608	95816	2208
rps7	gene	ribosomal-protein	−	96086	96554	468
trnV-GAC	gene	translation-rna	+	99061	99133	72
rrn16	gene	ribosomal-rna	+	99359	100850	1491
trnI-GAU	gene	translation-rna	+	101147	102165	1018
trnA-UGC	gene	translation-rna	+	102229	103108	879
rrn23	gene	ribosomal-rna	+	103279	106090	2811
rrn4.5	gene	ribosomal-rna	+	106188	106291	103
rrn5	gene	ribosomal-rna	+	106546	106667	121
trnR-ACG	gene	translation-rna	+	106910	106984	74
trnN-GUU	gene	translation-rna	−	107555	107627	72
ycf1	gene	other	+	107968	109099	1131
ndhF	gene	nad-dehydrogenase	−	108992	111224	2232
rpl32	gene	ribosomal-protein	+	111699	111870	171
trnL-UAG	gene	translation-rna	+	112617	112697	80
ccsA	gene	other	+	112785	113757	972
ndhD	gene	nad-dehydrogenase	−	113989	115519	1530
psaC	gene	photosystem-i	−	115609	115855	246
ndhE	gene	nad-dehydrogenase	−	116110	116416	306
ndhG	gene	nad-dehydrogenase	−	116630	117161	531
ndhI	gene	nad-dehydrogenase	−	117522	118029	507
ndhA	gene	nad-dehydrogenase	−	118109	120223	2114
ndhH	gene	nad-dehydrogenase	−	120224	121406	1182
rps15	gene	ribosomal-protein	−	121520	121793	273
ycf1	gene	other	−	122226	127776	5550
trnN-GUU	gene	translation-rna	+	128117	128189	72
trnR-ACG	gene	translation-rna	−	128760	128834	74
rrn5	gene	ribosomal-rna	−	129077	129198	121
rrn4.5	gene	ribosomal-rna	−	129453	129556	103
rrn23	gene	ribosomal-rna	−	129654	132465	2811
trnA-UGC	gene	translation-rna	−	132636	133515	879
trnI-GAU	gene	translation-rna	−	133579	134597	1018
rrn16	gene	ribosomal-rna	−	134894	136385	1491
trnV-GAC	gene	translation-rna	−	136611	136683	72
rps7	gene	ribosomal-protein	+	139190	139658	468
ndhB	gene	nad-dehydrogenase	+	139928	142136	2208
trnL-CAA	gene	translation-rna	+	142707	142788	81
ycf15	gene	other	−	143048	143198	150
ycf2	gene	other	−	143387	150227	6840
trnI-CAU	gene	translation-rna	+	150321	150395	74
rpl23	gene	ribosomal-protein	+	150560	150842	282
rpl2	gene	ribosomal-protein	+	150860	152339	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_067708.1DNA · accDNC_067708DNA · atpBNC_067708DNA · matKNC_067708DNA · ndhFNC_067708DNA · psbANC_067708DNA · rbcLNC_067708DNA · rps12NC_067708DNA · ycf1NC_067708