Coordinate-aware organelle record

Isodon scoparius chloroplast genome

Available NC_067681.1 152,610 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	392	1451	1059
trnK-UUU	gene	translation-rna	−	1682	4263	2581
matK	gene	other	−	2002	3523	1521
OOC22_pgp086	gene	other	−	4788	5934	1146
trnQ-UUG	gene	translation-rna	−	6879	6951	72
psbK	gene	photosystem-ii	+	7344	7530	186
psbI	gene	photosystem-ii	+	7917	8028	111
trnS-GCU	gene	translation-rna	−	8187	8275	88
trnG-UCC	gene	translation-rna	+	9037	9796	759
trnR-UCU	gene	translation-rna	+	9986	10058	72
atpA	gene	atp-synthase	−	10161	11685	1524
atpF	gene	atp-synthase	−	11796	13041	1245
atpH	gene	atp-synthase	−	13332	13578	246
atpI	gene	atp-synthase	−	14578	15322	744
rps2	gene	ribosomal-protein	−	15546	16257	711
rpoC2	gene	rna-polymerase	−	16473	20655	4182
rpoC1	gene	rna-polymerase	−	20819	23653	2834
rpoB	gene	rna-polymerase	−	23679	26892	3213
trnC-GCA	gene	translation-rna	+	28081	28152	71
petN	gene	cytochrome	+	28314	28404	90
psbM	gene	photosystem-ii	−	29395	29500	105
trnD-GUC	gene	translation-rna	−	30018	30092	74
trnY-GUA	gene	translation-rna	−	30202	30286	84
trnE-UUC	gene	translation-rna	−	30363	30436	73
trnT-GGU	gene	translation-rna	+	31045	31117	72
psbD	gene	photosystem-ii	+	32434	33496	1062
psbC	gene	photosystem-ii	+	33443	34865	1422
trnS-UGA	gene	translation-rna	−	35100	35193	93
psbZ	gene	photosystem-ii	+	35533	35722	189
trnG-GCC	gene	translation-rna	+	35966	36037	71
trnfM-CAU	gene	translation-rna	−	36225	36299	74
rps14	gene	ribosomal-protein	−	36444	36747	303
psaB	gene	photosystem-i	−	36869	39074	2205
psaA	gene	photosystem-i	−	39099	41352	2253
ycf3	gene	other	−	42125	44072	1947
trnS-GGA	gene	translation-rna	+	44935	45022	87
rps4	gene	ribosomal-protein	−	45311	45917	606
trnT-UGU	gene	translation-rna	−	46311	46384	73
trnL-UAA	gene	translation-rna	+	47055	47620	565
trnF-GAA	gene	translation-rna	+	47913	47986	73
ndhJ	gene	nad-dehydrogenase	−	48653	49130	477
ndhK	gene	nad-dehydrogenase	−	49276	49918	642
ndhC	gene	nad-dehydrogenase	−	49969	50332	363
trnV-UAC	gene	translation-rna	−	51288	51944	656
trnM-CAU	gene	translation-rna	+	52124	52197	73
atpE	gene	atp-synthase	−	52397	52799	402
atpB	gene	atp-synthase	−	52795	54292	1497
rbcL	gene	other	+	55082	56516	1434
accD	gene	other	+	57221	58703	1482
psaI	gene	photosystem-i	+	59404	59515	111
ycf4	gene	other	+	59961	60516	555
cemA	gene	other	+	61099	61789	690
petA	gene	cytochrome	+	62003	62966	963
psbJ	gene	photosystem-ii	−	64004	64127	123
psbL	gene	photosystem-ii	−	64261	64378	117
psbF	gene	photosystem-ii	−	64401	64521	120
psbE	gene	photosystem-ii	−	64535	64787	252
petL	gene	cytochrome	+	65679	65775	96
petG	gene	cytochrome	+	65949	66063	114
trnW-CCA	gene	translation-rna	−	66185	66259	74
trnP-UGG	gene	translation-rna	−	66427	66501	74
psaJ	gene	photosystem-i	+	66782	66917	135
rpl33	gene	ribosomal-protein	+	67377	67578	201
rps18	gene	ribosomal-protein	+	67744	68050	306
rpl20	gene	ribosomal-protein	−	68284	68671	387
rps12	gene	ribosomal-protein	−	69404	97609	28205
rps12	gene	ribosomal-protein	+	69404	139307	69903
clpP	gene	other	−	69636	71554	1918
psbB	gene	photosystem-ii	+	72026	73553	1527
psbT	gene	photosystem-ii	+	73738	73840	102
psbN	gene	photosystem-ii	−	73905	74037	132
psbH	gene	photosystem-ii	+	74142	74361	219
petB	gene	cytochrome	+	74486	75853	1367
petD	gene	cytochrome	+	76041	77235	1194
rpoA	gene	rna-polymerase	−	77411	78419	1008
rps11	gene	ribosomal-protein	−	78491	78908	417
rpl36	gene	ribosomal-protein	−	79023	79137	114
infA	gene	other	−	79232	79466	234
rps8	gene	ribosomal-protein	−	79592	79997	405
rpl14	gene	ribosomal-protein	−	80179	80548	369
rpl16	gene	ribosomal-protein	−	80681	81949	1268
rps3	gene	ribosomal-protein	−	82092	82755	663
rpl22	gene	ribosomal-protein	−	82739	83213	474
rps19	gene	ribosomal-protein	−	83277	83556	279
rpl2	gene	ribosomal-protein	−	83623	85102	1479
rpl23	gene	ribosomal-protein	−	85120	85402	282
trnI-CAU	gene	translation-rna	−	85567	85641	74
ycf2	gene	other	+	85735	92566	6831
ycf15	gene	other	+	92755	92905	150
trnL-CAA	gene	translation-rna	−	93165	93246	81
ndhB	gene	nad-dehydrogenase	−	93817	96025	2208
rps7	gene	ribosomal-protein	−	96295	96763	468
trnV-GAC	gene	translation-rna	+	99270	99342	72
rrn16	gene	ribosomal-rna	+	99568	101059	1491
trnI-GAU	gene	translation-rna	+	101356	102375	1019
trnA-UGC	gene	translation-rna	+	102439	103318	879
rrn23	gene	ribosomal-rna	+	103489	106300	2811
rrn4.5	gene	ribosomal-rna	+	106398	106501	103
rrn5	gene	ribosomal-rna	+	106756	106877	121
trnR-ACG	gene	translation-rna	+	107120	107194	74
trnN-GUU	gene	translation-rna	−	107754	107826	72
ycf1	gene	other	+	108167	109298	1131
ndhF	gene	nad-dehydrogenase	−	109191	111423	2232
rpl32	gene	ribosomal-protein	+	111899	112070	171
trnL-UAG	gene	translation-rna	+	112833	112913	80
ccsA	gene	other	+	113001	113973	972
ndhD	gene	nad-dehydrogenase	−	114204	115734	1530
psaC	gene	photosystem-i	−	115824	116070	246
ndhE	gene	nad-dehydrogenase	−	116325	116631	306
ndhG	gene	nad-dehydrogenase	−	116845	117376	531
ndhI	gene	nad-dehydrogenase	−	117735	118242	507
ndhA	gene	nad-dehydrogenase	−	118322	120444	2122
ndhH	gene	nad-dehydrogenase	−	120445	121627	1182
rps15	gene	ribosomal-protein	−	121749	122022	273
ycf1	gene	other	−	122451	127956	5505
trnN-GUU	gene	translation-rna	+	128297	128369	72
trnR-ACG	gene	translation-rna	−	128929	129003	74
rrn5	gene	ribosomal-rna	−	129246	129367	121
rrn4.5	gene	ribosomal-rna	−	129622	129725	103
rrn23	gene	ribosomal-rna	−	129823	132634	2811
trnA-UGC	gene	translation-rna	−	132805	133684	879
trnI-GAU	gene	translation-rna	−	133748	134767	1019
rrn16	gene	ribosomal-rna	−	135064	136555	1491
trnV-GAC	gene	translation-rna	−	136781	136853	72
rps7	gene	ribosomal-protein	+	139360	139828	468
ndhB	gene	nad-dehydrogenase	+	140098	142306	2208
trnL-CAA	gene	translation-rna	+	142877	142958	81
ycf15	gene	other	−	143218	143368	150
ycf2	gene	other	−	143557	150388	6831
trnI-CAU	gene	translation-rna	+	150482	150556	74
rpl23	gene	ribosomal-protein	+	150721	151003	282
rpl2	gene	ribosomal-protein	+	151021	152500	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_067681.1DNA · accDNC_067681DNA · atpBNC_067681DNA · matKNC_067681DNA · ndhFNC_067681DNA · psbANC_067681DNA · rbcLNC_067681DNA · rps12NC_067681DNA · ycf1NC_067681