Coordinate-aware organelle record

Isodon scrophularioides chloroplast genome

Available NC_067682.1 152,268 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	316	1375	1059
trnK-UUU	gene	translation-rna	−	1606	4187	2581
matK	gene	other	−	1926	3447	1521
ON967_pgp086	gene	other	−	4724	5866	1142
trnQ-UUG	gene	translation-rna	−	6717	6789	72
psbK	gene	photosystem-ii	+	7183	7369	186
psbI	gene	photosystem-ii	+	7759	7870	111
trnS-GCU	gene	translation-rna	−	8024	8112	88
trnG-UCC	gene	translation-rna	+	8773	9533	760
trnR-UCU	gene	translation-rna	+	9722	9794	72
atpA	gene	atp-synthase	−	9898	11422	1524
atpF	gene	atp-synthase	−	11522	12770	1248
atpH	gene	atp-synthase	−	13061	13307	246
atpI	gene	atp-synthase	−	14245	14989	744
rps2	gene	ribosomal-protein	−	15214	15925	711
rpoC2	gene	rna-polymerase	−	16139	20327	4188
rpoC1	gene	rna-polymerase	−	20491	23325	2834
rpoB	gene	rna-polymerase	−	23351	26564	3213
trnC-GCA	gene	translation-rna	+	27755	27826	71
petN	gene	cytochrome	+	27988	28078	90
psbM	gene	photosystem-ii	−	29084	29189	105
trnD-GUC	gene	translation-rna	−	29707	29781	74
trnY-GUA	gene	translation-rna	−	29891	29975	84
trnE-UUC	gene	translation-rna	−	30052	30125	73
trnT-GGU	gene	translation-rna	+	30700	30772	72
psbD	gene	photosystem-ii	+	32144	33206	1062
psbC	gene	photosystem-ii	+	33153	34575	1422
trnS-UGA	gene	translation-rna	−	34810	34903	93
psbZ	gene	photosystem-ii	+	35243	35432	189
trnG-GCC	gene	translation-rna	+	35669	35740	71
trnfM-CAU	gene	translation-rna	−	35911	35985	74
rps14	gene	ribosomal-protein	−	36129	36432	303
psaB	gene	photosystem-i	−	36554	38759	2205
psaA	gene	photosystem-i	−	38784	41037	2253
ycf3	gene	other	−	41836	43798	1962
trnS-GGA	gene	translation-rna	+	44642	44729	87
rps4	gene	ribosomal-protein	−	45025	45631	606
trnT-UGU	gene	translation-rna	−	46045	46118	73
trnL-UAA	gene	translation-rna	+	46811	47355	544
trnF-GAA	gene	translation-rna	+	47654	47727	73
ndhJ	gene	nad-dehydrogenase	−	48404	48881	477
ndhK	gene	nad-dehydrogenase	−	48991	49669	678
ndhC	gene	nad-dehydrogenase	−	49720	50083	363
trnV-UAC	gene	translation-rna	−	51009	51667	658
trnM-CAU	gene	translation-rna	+	51847	51920	73
atpE	gene	atp-synthase	−	52125	52527	402
atpB	gene	atp-synthase	−	52523	54020	1497
rbcL	gene	other	+	54818	56264	1446
accD	gene	other	+	56946	58428	1482
psaI	gene	photosystem-i	+	59124	59235	111
ycf4	gene	other	+	59680	60235	555
cemA	gene	other	+	60820	61510	690
petA	gene	cytochrome	+	61724	62687	963
psbJ	gene	photosystem-ii	−	63694	63817	123
psbL	gene	photosystem-ii	−	63951	64068	117
psbF	gene	photosystem-ii	−	64091	64211	120
psbE	gene	photosystem-ii	−	64225	64477	252
petL	gene	cytochrome	+	65370	65466	96
petG	gene	cytochrome	+	65640	65754	114
trnW-CCA	gene	translation-rna	−	65876	65950	74
trnP-UGG	gene	translation-rna	−	66119	66193	74
psaJ	gene	photosystem-i	+	66476	66611	135
rpl33	gene	ribosomal-protein	+	67058	67259	201
rps18	gene	ribosomal-protein	+	67425	67731	306
rpl20	gene	ribosomal-protein	−	67964	68351	387
rps12	gene	ribosomal-protein	−	69082	97240	28158
rps12	gene	ribosomal-protein	+	69082	139000	69918
clpP	gene	other	−	69314	71237	1923
psbB	gene	photosystem-ii	+	71709	73236	1527
psbT	gene	photosystem-ii	+	73420	73522	102
psbN	gene	photosystem-ii	−	73587	73719	132
psbH	gene	photosystem-ii	+	73824	74043	219
petB	gene	cytochrome	+	74177	75534	1357
petD	gene	cytochrome	+	75722	76916	1194
rpoA	gene	rna-polymerase	−	77092	78100	1008
rps11	gene	ribosomal-protein	−	78171	78588	417
rpl36	gene	ribosomal-protein	−	78697	78811	114
infA	gene	other	−	78899	79133	234
rps8	gene	ribosomal-protein	−	79258	79663	405
rpl14	gene	ribosomal-protein	−	79834	80203	369
rpl16	gene	ribosomal-protein	−	80337	81605	1268
rps3	gene	ribosomal-protein	−	81757	82420	663
rpl22	gene	ribosomal-protein	−	82404	82878	474
rps19	gene	ribosomal-protein	−	82942	83221	279
rpl2	gene	ribosomal-protein	−	83289	84768	1479
rpl23	gene	ribosomal-protein	−	84786	85068	282
trnI-CAU	gene	translation-rna	−	85233	85307	74
ycf2	gene	other	+	85401	92205	6804
ycf15	gene	other	+	92394	92544	150
trnL-CAA	gene	translation-rna	−	92804	92885	81
ndhB	gene	nad-dehydrogenase	−	93447	95655	2208
rps7	gene	ribosomal-protein	−	95925	96393	468
trnV-GAC	gene	translation-rna	+	98912	98984	72
rrn16	gene	ribosomal-rna	+	99210	100701	1491
trnI-GAU	gene	translation-rna	+	100998	102017	1019
trnA-UGC	gene	translation-rna	+	102081	102960	879
rrn23	gene	ribosomal-rna	+	103123	105934	2811
rrn4.5	gene	ribosomal-rna	+	106032	106135	103
rrn5	gene	ribosomal-rna	+	106390	106511	121
trnR-ACG	gene	translation-rna	+	106754	106828	74
trnN-GUU	gene	translation-rna	−	107400	107472	72
ycf1	gene	other	+	107812	108943	1131
ndhF	gene	nad-dehydrogenase	−	108836	111068	2232
rpl32	gene	ribosomal-protein	+	111552	111723	171
trnL-UAG	gene	translation-rna	+	112479	112559	80
ccsA	gene	other	+	112646	113618	972
ndhD	gene	nad-dehydrogenase	−	113841	115371	1530
psaC	gene	photosystem-i	−	115461	115707	246
ndhE	gene	nad-dehydrogenase	−	115962	116268	306
ndhG	gene	nad-dehydrogenase	−	116482	117013	531
ndhI	gene	nad-dehydrogenase	−	117381	117888	507
ndhA	gene	nad-dehydrogenase	−	117968	120078	2110
ndhH	gene	nad-dehydrogenase	−	120079	121261	1182
rps15	gene	ribosomal-protein	−	121375	121639	264
ycf1	gene	other	−	122078	127634	5556
trnN-GUU	gene	translation-rna	+	127974	128046	72
trnR-ACG	gene	translation-rna	−	128618	128692	74
rrn5	gene	ribosomal-rna	−	128935	129056	121
rrn4.5	gene	ribosomal-rna	−	129311	129414	103
rrn23	gene	ribosomal-rna	−	129512	132323	2811
trnA-UGC	gene	translation-rna	−	132486	133365	879
trnI-GAU	gene	translation-rna	−	133429	134448	1019
rrn16	gene	ribosomal-rna	−	134745	136236	1491
trnV-GAC	gene	translation-rna	−	136462	136534	72
rps7	gene	ribosomal-protein	+	139053	139521	468
ndhB	gene	nad-dehydrogenase	+	139791	141999	2208
trnL-CAA	gene	translation-rna	+	142561	142647	86
ycf15	gene	other	−	142902	143052	150
ycf2	gene	other	−	143241	150045	6804
trnI-CAU	gene	translation-rna	+	150139	150213	74
rpl23	gene	ribosomal-protein	+	150378	150660	282
rpl2	gene	ribosomal-protein	+	150678	152157	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_067682.1DNA · accDNC_067682DNA · atpBNC_067682DNA · matKNC_067682DNA · ndhFNC_067682DNA · psbANC_067682DNA · rbcLNC_067682DNA · rps12NC_067682DNA · ycf1NC_067682