Coordinate-aware organelle record

Isodon secundiflorus chloroplast genome

Available NC_067703.1 152,680 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	388	1447	1059
trnK-UUU	gene	translation-rna	−	1678	4259	2581
matK	gene	other	−	1998	3519	1521
OOA38_pgp086	gene	other	−	4791	5937	1146
trnQ-UUG	gene	translation-rna	−	6882	6954	72
psbK	gene	photosystem-ii	+	7347	7533	186
psbI	gene	photosystem-ii	+	7919	8030	111
trnS-GCU	gene	translation-rna	−	8185	8273	88
trnG-UCC	gene	translation-rna	+	9034	9794	760
trnR-UCU	gene	translation-rna	+	9984	10056	72
atpA	gene	atp-synthase	−	10159	11683	1524
atpF	gene	atp-synthase	−	11786	13032	1246
atpH	gene	atp-synthase	−	13323	13569	246
atpI	gene	atp-synthase	−	14572	15316	744
rps2	gene	ribosomal-protein	−	15541	16252	711
rpoC2	gene	rna-polymerase	−	16468	20641	4173
rpoC1	gene	rna-polymerase	−	20805	23639	2834
rpoB	gene	rna-polymerase	−	23665	26878	3213
trnC-GCA	gene	translation-rna	+	28067	28138	71
petN	gene	cytochrome	+	28300	28390	90
psbM	gene	photosystem-ii	−	29388	29493	105
trnD-GUC	gene	translation-rna	−	30011	30085	74
trnY-GUA	gene	translation-rna	−	30195	30279	84
trnE-UUC	gene	translation-rna	−	30356	30429	73
trnT-GGU	gene	translation-rna	+	31038	31110	72
psbD	gene	photosystem-ii	+	32427	33489	1062
psbC	gene	photosystem-ii	+	33436	34858	1422
trnS-UGA	gene	translation-rna	−	35095	35188	93
psbZ	gene	photosystem-ii	+	35528	35717	189
trnG-GCC	gene	translation-rna	+	35961	36032	71
trnfM-CAU	gene	translation-rna	−	36223	36297	74
rps14	gene	ribosomal-protein	−	36442	36745	303
psaB	gene	photosystem-i	−	36867	39072	2205
psaA	gene	photosystem-i	−	39097	41350	2253
ycf3	gene	other	−	42153	44101	1948
trnS-GGA	gene	translation-rna	+	44964	45051	87
rps4	gene	ribosomal-protein	−	45347	45953	606
trnT-UGU	gene	translation-rna	−	46376	46449	73
trnL-UAA	gene	translation-rna	+	47135	47679	544
trnF-GAA	gene	translation-rna	+	47972	48045	73
ndhJ	gene	nad-dehydrogenase	−	48712	49189	477
ndhK	gene	nad-dehydrogenase	−	49299	49977	678
ndhC	gene	nad-dehydrogenase	−	50028	50391	363
trnV-UAC	gene	translation-rna	−	51347	52003	656
trnM-CAU	gene	translation-rna	+	52183	52256	73
atpE	gene	atp-synthase	−	52456	52858	402
atpB	gene	atp-synthase	−	52854	54351	1497
rbcL	gene	other	+	55142	56576	1434
accD	gene	other	+	57271	58753	1482
psaI	gene	photosystem-i	+	59453	59564	111
ycf4	gene	other	+	60010	60565	555
cemA	gene	other	+	61155	61845	690
petA	gene	cytochrome	+	62059	63022	963
psbJ	gene	photosystem-ii	−	64059	64182	123
psbL	gene	photosystem-ii	−	64316	64433	117
psbF	gene	photosystem-ii	−	64456	64576	120
psbE	gene	photosystem-ii	−	64590	64842	252
petL	gene	cytochrome	+	65734	65830	96
petG	gene	cytochrome	+	66004	66118	114
trnW-CCA	gene	translation-rna	−	66240	66314	74
trnP-UGG	gene	translation-rna	−	66482	66556	74
psaJ	gene	photosystem-i	+	66837	66972	135
rpl33	gene	ribosomal-protein	+	67433	67634	201
rps18	gene	ribosomal-protein	+	67800	68106	306
rpl20	gene	ribosomal-protein	−	68339	68726	387
rps12	gene	ribosomal-protein	−	69459	97662	28203
rps12	gene	ribosomal-protein	+	69459	139377	69918
clpP	gene	other	−	69691	71603	1912
psbB	gene	photosystem-ii	+	72075	73602	1527
psbT	gene	photosystem-ii	+	73787	73889	102
psbN	gene	photosystem-ii	−	73954	74086	132
psbH	gene	photosystem-ii	+	74191	74410	219
petB	gene	cytochrome	+	74535	75901	1366
petD	gene	cytochrome	+	76089	77282	1193
rpoA	gene	rna-polymerase	−	77458	78466	1008
rps11	gene	ribosomal-protein	−	78537	78954	417
rpl36	gene	ribosomal-protein	−	79069	79183	114
infA	gene	other	−	79278	79512	234
rps8	gene	ribosomal-protein	−	79637	80042	405
rpl14	gene	ribosomal-protein	−	80232	80601	369
rpl16	gene	ribosomal-protein	−	80734	82002	1268
rps3	gene	ribosomal-protein	−	82145	82808	663
rpl22	gene	ribosomal-protein	−	82792	83266	474
rps19	gene	ribosomal-protein	−	83330	83609	279
rpl2	gene	ribosomal-protein	−	83676	85155	1479
rpl23	gene	ribosomal-protein	−	85173	85455	282
trnI-CAU	gene	translation-rna	−	85620	85694	74
ycf2	gene	other	+	85788	92619	6831
ycf15	gene	other	+	92808	92958	150
trnL-CAA	gene	translation-rna	−	93218	93299	81
ndhB	gene	nad-dehydrogenase	−	93870	96078	2208
rps7	gene	ribosomal-protein	−	96348	96816	468
trnV-GAC	gene	translation-rna	+	99323	99395	72
rrn16	gene	ribosomal-rna	+	99621	101112	1491
trnI-GAU	gene	translation-rna	+	101409	102428	1019
trnA-UGC	gene	translation-rna	+	102492	103371	879
rrn23	gene	ribosomal-rna	+	103542	106353	2811
rrn4.5	gene	ribosomal-rna	+	106451	106554	103
rrn5	gene	ribosomal-rna	+	106809	106930	121
trnR-ACG	gene	translation-rna	+	107173	107247	74
trnN-GUU	gene	translation-rna	−	107813	107885	72
ycf1	gene	other	+	108226	109357	1131
ndhF	gene	nad-dehydrogenase	−	109250	111482	2232
rpl32	gene	ribosomal-protein	+	111950	112121	171
trnL-UAG	gene	translation-rna	+	112884	112964	80
ccsA	gene	other	+	113052	114024	972
ndhD	gene	nad-dehydrogenase	−	114255	115785	1530
psaC	gene	photosystem-i	−	115875	116121	246
ndhE	gene	nad-dehydrogenase	−	116376	116682	306
ndhG	gene	nad-dehydrogenase	−	116896	117427	531
ndhI	gene	nad-dehydrogenase	−	117787	118294	507
ndhA	gene	nad-dehydrogenase	−	118374	120498	2124
ndhH	gene	nad-dehydrogenase	−	120499	121681	1182
rps15	gene	ribosomal-protein	−	121795	122068	273
ycf1	gene	other	−	122497	128020	5523
trnN-GUU	gene	translation-rna	+	128361	128433	72
trnR-ACG	gene	translation-rna	−	128999	129073	74
rrn5	gene	ribosomal-rna	−	129316	129437	121
rrn4.5	gene	ribosomal-rna	−	129692	129795	103
rrn23	gene	ribosomal-rna	−	129893	132704	2811
trnA-UGC	gene	translation-rna	−	132875	133754	879
trnI-GAU	gene	translation-rna	−	133818	134837	1019
rrn16	gene	ribosomal-rna	−	135134	136625	1491
trnV-GAC	gene	translation-rna	−	136851	136923	72
rps7	gene	ribosomal-protein	+	139430	139898	468
ndhB	gene	nad-dehydrogenase	+	140168	142376	2208
trnL-CAA	gene	translation-rna	+	142947	143028	81
ycf15	gene	other	−	143288	143438	150
ycf2	gene	other	−	143627	150458	6831
trnI-CAU	gene	translation-rna	+	150552	150626	74
rpl23	gene	ribosomal-protein	+	150791	151073	282
rpl2	gene	ribosomal-protein	+	151091	152570	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_067703.1DNA · accDNC_067703DNA · atpBNC_067703DNA · matKNC_067703DNA · ndhFNC_067703DNA · psbANC_067703DNA · rbcLNC_067703DNA · rps12NC_067703DNA · ycf1NC_067703