Coordinate-aware organelle record

Isodon shikokianus var. occidentalis chloroplast genome

Available ON858908.1 152,677 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	392	1451	1059
trnK-UUU	gene	translation-rna	−	1682	4263	2581
matK	gene	other	−	2002	3523	1521
trnQ-UUG	gene	translation-rna	−	6877	6949	72
psbK	gene	photosystem-ii	+	7342	7528	186
psbI	gene	photosystem-ii	+	7915	8026	111
trnS-GCU	gene	translation-rna	−	8181	8269	88
trnG-UCC	gene	translation-rna	+	9036	9796	760
trnR-UCU	gene	translation-rna	+	9986	10058	72
atpA	gene	atp-synthase	−	10161	11685	1524
atpF	gene	atp-synthase	−	11796	13043	1247
atpH	gene	atp-synthase	−	13340	13586	246
atpI	gene	atp-synthase	−	14587	15331	744
rps2	gene	ribosomal-protein	−	15556	16267	711
rpoC2	gene	rna-polymerase	−	16482	20664	4182
rpoC1	gene	rna-polymerase	−	20828	23662	2834
rpoB	gene	rna-polymerase	−	23688	26901	3213
trnC-GCA	gene	translation-rna	+	28090	28161	71
petN	gene	cytochrome	+	28323	28413	90
psbM	gene	photosystem-ii	−	29405	29510	105
trnD-GUC	gene	translation-rna	−	30028	30102	74
trnY-GUA	gene	translation-rna	−	30212	30296	84
trnE-UUC	gene	translation-rna	−	30373	30446	73
trnT-GGU	gene	translation-rna	+	31055	31127	72
psbD	gene	photosystem-ii	+	32453	33515	1062
psbC	gene	photosystem-ii	+	33462	34884	1422
trnS-UGA	gene	translation-rna	−	35119	35212	93
psbZ	gene	photosystem-ii	+	35552	35741	189
trnG-GCC	gene	translation-rna	+	35985	36056	71
trnfM-CAU	gene	translation-rna	−	36246	36320	74
rps14	gene	ribosomal-protein	−	36465	36768	303
psaB	gene	photosystem-i	−	36890	39095	2205
psaA	gene	photosystem-i	−	39120	41373	2253
ycf3	gene	other	−	42146	44094	1948
trnS-GGA	gene	translation-rna	+	44957	45044	87
rps4	gene	ribosomal-protein	−	45340	45946	606
trnT-UGU	gene	translation-rna	−	46359	46432	73
trnL-UAA	gene	translation-rna	+	47107	47672	565
trnF-GAA	gene	translation-rna	+	47965	48038	73
ndhJ	gene	nad-dehydrogenase	−	48705	49182	477
ndhK	gene	nad-dehydrogenase	−	49292	49970	678
ndhC	gene	nad-dehydrogenase	−	50021	50384	363
trnV-UAC	gene	translation-rna	−	51346	52003	657
trnM-CAU	gene	translation-rna	+	52183	52256	73
atpE	gene	atp-synthase	−	52456	52858	402
atpB	gene	atp-synthase	−	52854	54351	1497
rbcL	gene	other	+	55142	56576	1434
accD	gene	other	+	57280	58762	1482
psaI	gene	photosystem-i	+	59461	59572	111
ycf4	gene	other	+	60018	60573	555
cemA	gene	other	+	61163	61853	690
petA	gene	cytochrome	+	62067	63030	963
psbJ	gene	photosystem-ii	−	64067	64190	123
psbL	gene	photosystem-ii	−	64324	64441	117
psbF	gene	photosystem-ii	−	64464	64584	120
psbE	gene	photosystem-ii	−	64598	64850	252
petL	gene	cytochrome	+	65742	65838	96
petG	gene	cytochrome	+	66012	66126	114
trnW-CCA	gene	translation-rna	−	66248	66322	74
trnP-UGG	gene	translation-rna	−	66490	66564	74
psaJ	gene	photosystem-i	+	66845	66980	135
rpl33	gene	ribosomal-protein	+	67441	67642	201
rps18	gene	ribosomal-protein	+	67808	68114	306
rpl20	gene	ribosomal-protein	−	68348	68735	387
rps12	gene	ribosomal-protein	−	69459	97657	28198
rps12	gene	ribosomal-protein	+	69459	139374	69915
clpP	gene	other	−	69691	71606	1915
psbB	gene	photosystem-ii	+	72078	73605	1527
psbT	gene	photosystem-ii	+	73788	73890	102
psbN	gene	photosystem-ii	−	73955	74087	132
psbH	gene	photosystem-ii	+	74192	74411	219
petB	gene	cytochrome	+	74536	75903	1367
petD	gene	cytochrome	+	76091	77284	1193
rpoA	gene	rna-polymerase	−	77460	78468	1008
rps11	gene	ribosomal-protein	−	78539	78956	417
rpl36	gene	ribosomal-protein	−	79071	79185	114
infA	gene	other	−	79280	79514	234
rps8	gene	ribosomal-protein	−	79640	80045	405
rpl14	gene	ribosomal-protein	−	80227	80596	369
rpl16	gene	ribosomal-protein	−	80729	81997	1268
rps3	gene	ribosomal-protein	−	82140	82803	663
rpl22	gene	ribosomal-protein	−	82787	83261	474
rps19	gene	ribosomal-protein	−	83325	83604	279
rpl2	gene	ribosomal-protein	−	83671	85150	1479
rpl23	gene	ribosomal-protein	−	85168	85450	282
trnI-CAU	gene	translation-rna	−	85615	85689	74
ycf2	gene	other	+	85783	92614	6831
ycf15	gene	other	+	92803	92953	150
trnL-CAA	gene	translation-rna	−	93213	93294	81
ndhB	gene	nad-dehydrogenase	−	93865	96073	2208
rps7	gene	ribosomal-protein	−	96343	96811	468
trnV-GAC	gene	translation-rna	+	99324	99396	72
rrn16	gene	ribosomal-rna	+	99622	101113	1491
trnI-GAU	gene	translation-rna	+	101410	102429	1019
trnA-UGC	gene	translation-rna	+	102493	103372	879
rrn23	gene	ribosomal-rna	+	103543	106354	2811
rrn4.5	gene	ribosomal-rna	+	106452	106555	103
rrn5	gene	ribosomal-rna	+	106810	106931	121
trnR-ACG	gene	translation-rna	+	107174	107248	74
trnN-GUU	gene	translation-rna	−	107810	107882	72
ycf1	gene	other	+	108223	109354	1131
ndhF	gene	nad-dehydrogenase	−	109247	111479	2232
rpl32	gene	ribosomal-protein	+	111946	112117	171
trnL-UAG	gene	translation-rna	+	112881	112961	80
ccsA	gene	other	+	113049	114021	972
ndhD	gene	nad-dehydrogenase	−	114253	115783	1530
psaC	gene	photosystem-i	−	115873	116119	246
ndhE	gene	nad-dehydrogenase	−	116374	116680	306
ndhG	gene	nad-dehydrogenase	−	116894	117425	531
ndhI	gene	nad-dehydrogenase	−	117783	118290	507
ndhA	gene	nad-dehydrogenase	−	118370	120493	2123
ndhH	gene	nad-dehydrogenase	−	120494	121676	1182
rps15	gene	ribosomal-protein	−	121790	122063	273
ycf1	gene	other	−	122492	128015	5523
trnN-GUU	gene	translation-rna	+	128356	128428	72
trnR-ACG	gene	translation-rna	−	128990	129064	74
rrn5	gene	ribosomal-rna	−	129307	129428	121
rrn4.5	gene	ribosomal-rna	−	129683	129786	103
rrn23	gene	ribosomal-rna	−	129884	132695	2811
trnA-UGC	gene	translation-rna	−	132866	133745	879
trnI-GAU	gene	translation-rna	−	133809	134828	1019
rrn16	gene	ribosomal-rna	−	135125	136616	1491
trnV-GAC	gene	translation-rna	−	136842	136914	72
rps7	gene	ribosomal-protein	+	139427	139895	468
ndhB	gene	nad-dehydrogenase	+	140165	142373	2208
trnL-CAA	gene	translation-rna	+	142944	143025	81
ycf15	gene	other	−	143285	143435	150
ycf2	gene	other	−	143624	150455	6831
trnI-CAU	gene	translation-rna	+	150549	150623	74
rpl23	gene	ribosomal-protein	+	150788	151070	282
rpl2	gene	ribosomal-protein	+	151088	152567	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeON858908.1DNA · accDON858908DNA · atpBON858908DNA · matKON858908DNA · ndhFON858908DNA · psbAON858908DNA · rbcLON858908DNA · rps12ON858908DNA · ycf1ON858908