Coordinate-aware organelle record

Isodon smithianus chloroplast genome

Available NC_067684.1 152,672 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	392	1451	1059
trnK-UUU	gene	translation-rna	−	1682	4263	2581
matK	gene	other	−	2002	3523	1521
ON901_pgp086	gene	other	−	4797	5943	1146
trnQ-UUG	gene	translation-rna	−	6894	6966	72
psbK	gene	photosystem-ii	+	7359	7545	186
psbI	gene	photosystem-ii	+	7932	8043	111
trnS-GCU	gene	translation-rna	−	8198	8286	88
trnG-UCC	gene	translation-rna	+	9046	9806	760
trnR-UCU	gene	translation-rna	+	9996	10068	72
atpA	gene	atp-synthase	−	10171	11695	1524
atpF	gene	atp-synthase	−	11799	13050	1251
atpH	gene	atp-synthase	−	13341	13587	246
atpI	gene	atp-synthase	−	14587	15331	744
rps2	gene	ribosomal-protein	−	15556	16267	711
rpoC2	gene	rna-polymerase	−	16483	20665	4182
rpoC1	gene	rna-polymerase	−	20829	23663	2834
rpoB	gene	rna-polymerase	−	23689	26902	3213
trnC-GCA	gene	translation-rna	+	28091	28162	71
petN	gene	cytochrome	+	28324	28414	90
psbM	gene	photosystem-ii	−	29407	29512	105
trnD-GUC	gene	translation-rna	−	30030	30104	74
trnY-GUA	gene	translation-rna	−	30214	30298	84
trnE-UUC	gene	translation-rna	−	30375	30448	73
trnT-GGU	gene	translation-rna	+	31050	31122	72
psbD	gene	photosystem-ii	+	32439	33501	1062
psbC	gene	photosystem-ii	+	33448	34870	1422
trnS-UGA	gene	translation-rna	−	35104	35197	93
psbZ	gene	photosystem-ii	+	35537	35726	189
trnG-GCC	gene	translation-rna	+	35970	36041	71
trnfM-CAU	gene	translation-rna	−	36227	36301	74
rps14	gene	ribosomal-protein	−	36446	36749	303
psaB	gene	photosystem-i	−	36871	39076	2205
psaA	gene	photosystem-i	−	39101	41354	2253
ycf3	gene	other	−	42126	44067	1941
trnS-GGA	gene	translation-rna	+	44930	45017	87
rps4	gene	ribosomal-protein	−	45322	45928	606
trnT-UGU	gene	translation-rna	−	46353	46426	73
trnL-UAA	gene	translation-rna	+	47113	47663	550
trnF-GAA	gene	translation-rna	+	47956	48029	73
ndhJ	gene	nad-dehydrogenase	−	48696	49173	477
ndhK	gene	nad-dehydrogenase	−	49283	49961	678
ndhC	gene	nad-dehydrogenase	−	50012	50375	363
trnV-UAC	gene	translation-rna	−	51337	51994	657
trnM-CAU	gene	translation-rna	+	52174	52247	73
atpE	gene	atp-synthase	−	52447	52849	402
atpB	gene	atp-synthase	−	52845	54342	1497
rbcL	gene	other	+	55133	56567	1434
accD	gene	other	+	57271	58753	1482
psaI	gene	photosystem-i	+	59451	59562	111
ycf4	gene	other	+	60008	60563	555
cemA	gene	other	+	61153	61843	690
petA	gene	cytochrome	+	62057	63020	963
psbJ	gene	photosystem-ii	−	64049	64172	123
psbL	gene	photosystem-ii	−	64306	64423	117
psbF	gene	photosystem-ii	−	64446	64566	120
psbE	gene	photosystem-ii	−	64580	64832	252
petL	gene	cytochrome	+	65724	65820	96
petG	gene	cytochrome	+	65994	66108	114
trnW-CCA	gene	translation-rna	−	66230	66304	74
trnP-UGG	gene	translation-rna	−	66472	66546	74
psaJ	gene	photosystem-i	+	66827	66962	135
rpl33	gene	ribosomal-protein	+	67423	67624	201
rps18	gene	ribosomal-protein	+	67790	68096	306
rpl20	gene	ribosomal-protein	−	68330	68717	387
rps12	gene	ribosomal-protein	−	69450	97651	28201
rps12	gene	ribosomal-protein	+	69450	139369	69919
clpP	gene	other	−	69682	71599	1917
psbB	gene	photosystem-ii	+	72071	73598	1527
psbT	gene	photosystem-ii	+	73782	73884	102
psbN	gene	photosystem-ii	−	73949	74081	132
psbH	gene	photosystem-ii	+	74186	74405	219
petB	gene	cytochrome	+	74530	75897	1367
petD	gene	cytochrome	+	76085	77278	1193
rpoA	gene	rna-polymerase	−	77454	78462	1008
rps11	gene	ribosomal-protein	−	78533	78950	417
rpl36	gene	ribosomal-protein	−	79065	79179	114
infA	gene	other	−	79274	79508	234
rps8	gene	ribosomal-protein	−	79633	80038	405
rpl14	gene	ribosomal-protein	−	80220	80589	369
rpl16	gene	ribosomal-protein	−	80722	81991	1269
rps3	gene	ribosomal-protein	−	82134	82797	663
rpl22	gene	ribosomal-protein	−	82781	83255	474
rps19	gene	ribosomal-protein	−	83319	83598	279
rpl2	gene	ribosomal-protein	−	83665	85144	1479
rpl23	gene	ribosomal-protein	−	85162	85444	282
trnI-CAU	gene	translation-rna	−	85609	85683	74
ycf2	gene	other	+	85777	92608	6831
ycf15	gene	other	+	92797	92947	150
trnL-CAA	gene	translation-rna	−	93207	93288	81
ndhB	gene	nad-dehydrogenase	−	93859	96067	2208
rps7	gene	ribosomal-protein	−	96337	96805	468
trnV-GAC	gene	translation-rna	+	99312	99384	72
rrn16	gene	ribosomal-rna	+	99610	101101	1491
trnI-GAU	gene	translation-rna	+	101398	102417	1019
trnA-UGC	gene	translation-rna	+	102481	103359	878
rrn23	gene	ribosomal-rna	+	103530	106341	2811
rrn4.5	gene	ribosomal-rna	+	106439	106542	103
rrn5	gene	ribosomal-rna	+	106797	106918	121
trnR-ACG	gene	translation-rna	+	107161	107235	74
trnN-GUU	gene	translation-rna	−	107801	107873	72
ycf1	gene	other	+	108214	109345	1131
ndhF	gene	nad-dehydrogenase	−	109238	111470	2232
rpl32	gene	ribosomal-protein	+	111945	112116	171
trnL-UAG	gene	translation-rna	+	112879	112959	80
ccsA	gene	other	+	113047	114019	972
ndhD	gene	nad-dehydrogenase	−	114251	115781	1530
psaC	gene	photosystem-i	−	115871	116117	246
ndhE	gene	nad-dehydrogenase	−	116372	116678	306
ndhG	gene	nad-dehydrogenase	−	116892	117423	531
ndhI	gene	nad-dehydrogenase	−	117781	118288	507
ndhA	gene	nad-dehydrogenase	−	118368	120491	2123
ndhH	gene	nad-dehydrogenase	−	120492	121674	1182
rps15	gene	ribosomal-protein	−	121788	122061	273
ycf1	gene	other	−	122490	128013	5523
trnN-GUU	gene	translation-rna	+	128354	128426	72
trnR-ACG	gene	translation-rna	−	128992	129066	74
rrn5	gene	ribosomal-rna	−	129309	129430	121
rrn4.5	gene	ribosomal-rna	−	129685	129788	103
rrn23	gene	ribosomal-rna	−	129886	132697	2811
trnA-UGC	gene	translation-rna	−	132868	133746	878
trnI-GAU	gene	translation-rna	−	133810	134829	1019
rrn16	gene	ribosomal-rna	−	135126	136617	1491
trnV-GAC	gene	translation-rna	−	136843	136915	72
rps7	gene	ribosomal-protein	+	139422	139890	468
ndhB	gene	nad-dehydrogenase	+	140160	142368	2208
trnL-CAA	gene	translation-rna	+	142939	143020	81
ycf15	gene	other	−	143280	143430	150
ycf2	gene	other	−	143619	150450	6831
trnI-CAU	gene	translation-rna	+	150544	150618	74
rpl23	gene	ribosomal-protein	+	150783	151065	282
rpl2	gene	ribosomal-protein	+	151083	152562	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_067684.1DNA · accDNC_067684DNA · atpBNC_067684DNA · matKNC_067684DNA · ndhFNC_067684DNA · psbANC_067684DNA · rbcLNC_067684DNA · rps12NC_067684DNA · ycf1NC_067684