Coordinate-aware organelle record

Isodon sp CL-2021 chloroplast genome

Available MW940491.1 152,642 bp 155 coordinate-linked features

Accession record

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

155 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	49	124	75
trnH-GUG	gene	translation-rna	−	50	125	75
psbA	gene	photosystem-ii	−	432	1491	1059
trnK-UUU	gene	translation-rna	−	1721	4298	2577
matK	gene	other	−	2042	3563	1521
rps16	gene	ribosomal-protein	−	4826	5972	1146
trnQ-UUG	gene	translation-rna	−	6912	6985	73
trnQ-UUG	gene	translation-rna	−	6913	6985	72
psbK	gene	photosystem-ii	+	7378	7564	186
psbI	gene	photosystem-ii	+	7951	8062	111
trnS-GCU	gene	translation-rna	−	8217	8305	88
trnG-UCC	gene	translation-rna	+	9070	9830	760
trnR-UCU	gene	translation-rna	+	10021	10093	72
atpA	gene	atp-synthase	−	10196	11720	1524
atpF	gene	atp-synthase	−	11823	13069	1246
atpH	gene	atp-synthase	−	13360	13606	246
atpI	gene	atp-synthase	−	14606	15350	744
rps2	gene	ribosomal-protein	−	15575	16286	711
rpoC2	gene	rna-polymerase	−	16502	20672	4170
rpoC1	gene	rna-polymerase	−	20848	23687	2839
rpoB	gene	rna-polymerase	−	23713	26926	3213
trnC-GCA	gene	translation-rna	+	28115	28186	71
trnC-GCA	gene	translation-rna	+	28115	28196	81
petN	gene	cytochrome	+	28348	28438	90
psbM	gene	photosystem-ii	−	29430	29535	105
trnD-GUC	gene	translation-rna	−	30051	30128	77
trnD-GUC	gene	translation-rna	−	30053	30127	74
trnY-GUA	gene	translation-rna	−	30236	30322	86
trnY-GUA	gene	translation-rna	−	30237	30321	84
trnE-UUC	gene	translation-rna	−	30399	30472	73
trnT-GGU	gene	translation-rna	+	31080	31154	74
trnT-GGU	gene	translation-rna	+	31081	31153	72
psbD	gene	photosystem-ii	+	32470	33532	1062
psbC	gene	photosystem-ii	+	33515	34901	1386
trnS-UGA	gene	translation-rna	−	35138	35230	92
trnS-UGA	gene	translation-rna	−	35138	35231	93
psbZ	gene	photosystem-ii	+	35571	35760	189
trnG-GCC	gene	translation-rna	+	36004	36075	71
trnM-CAU	gene	translation-rna	−	36264	36339	75
trnfM-CAU	gene	translation-rna	−	36265	36339	74
rps14	gene	ribosomal-protein	−	36484	36787	303
psaB	gene	photosystem-i	−	36909	39114	2205
psaA	gene	photosystem-i	−	39139	41392	2253
ycf3	gene	other	−	42165	44113	1948
trnS-GGA	gene	translation-rna	+	44977	45064	87
trnS-GGA	gene	translation-rna	+	44977	45065	88
rps4	gene	ribosomal-protein	−	45360	45966	606
trnT-UGU	gene	translation-rna	−	46390	46465	75
trnT-UGU	gene	translation-rna	−	46391	46464	73
trnL-UAA	gene	translation-rna	+	47151	47695	544
trnF-GAA	gene	translation-rna	+	47988	48061	73
trnF-GAA	gene	translation-rna	+	47988	48062	74
ndhJ	gene	nad-dehydrogenase	−	48728	49205	477
ndhK	gene	nad-dehydrogenase	−	49309	49987	678
ndhC	gene	nad-dehydrogenase	−	50038	50401	363
trnM-CAU	gene	translation-rna	+	52182	52255	73
trnM-CAU	gene	translation-rna	+	52183	52255	72
atpE	gene	atp-synthase	−	52455	52857	402
atpB	gene	atp-synthase	−	52853	54350	1497
rbcL	gene	other	+	55140	56574	1434
accD	gene	other	+	57278	58760	1482
psaI	gene	photosystem-i	+	59459	59570	111
ycf4	gene	other	+	60016	60571	555
cemA	gene	other	+	61160	61850	690
petA	gene	cytochrome	+	62064	63027	963
psbJ	gene	photosystem-ii	−	64064	64187	123
psbL	gene	photosystem-ii	−	64321	64438	117
psbF	gene	photosystem-ii	−	64461	64581	120
psbE	gene	photosystem-ii	−	64595	64847	252
petL	gene	cytochrome	+	65739	65835	96
petG	gene	cytochrome	+	66009	66123	114
trnW-CCA	gene	translation-rna	−	66236	66310	74
trnP-UGG	gene	translation-rna	−	66476	66552	76
trnP-UGG	gene	translation-rna	−	66478	66552	74
psaJ	gene	photosystem-i	+	66833	66968	135
rpl33	gene	ribosomal-protein	+	67430	67631	201
rps18	gene	ribosomal-protein	+	67797	68103	306
rpl20	gene	ribosomal-protein	−	68336	68723	387
rps12	gene	ribosomal-protein	−	69457	97663	28206
rps12	gene	ribosomal-protein	+	69457	139379	69922
clpP1	gene	other	−	69689	71609	1920
psbB	gene	photosystem-ii	+	72081	73608	1527
psbT	gene	photosystem-ii	+	73792	73894	102
psbH	gene	photosystem-ii	+	74196	74415	219
petB	gene	cytochrome	+	74540	75901	1361
petD	gene	cytochrome	+	76089	77282	1193
rpoA	gene	rna-polymerase	−	77458	78466	1008
rps11	gene	ribosomal-protein	−	78537	78954	417
rpl36	gene	ribosomal-protein	−	79069	79183	114
infA	gene	other	−	79278	79512	234
rps8	gene	ribosomal-protein	−	79638	80043	405
rpl14	gene	ribosomal-protein	−	80233	80602	369
rpl16	gene	ribosomal-protein	−	80735	82003	1268
rps3	gene	ribosomal-protein	−	82146	82809	663
rpl22	gene	ribosomal-protein	−	82793	83267	474
rps19	gene	ribosomal-protein	−	83331	83610	279
rpl2	gene	ribosomal-protein	−	83677	85156	1479
rpl23	gene	ribosomal-protein	−	85174	85456	282
trnM-CAU	gene	translation-rna	−	85620	85695	75
trnI-CAU	gene	translation-rna	−	85621	85695	74
ycf2	gene	other	+	85789	92620	6831
ycf15	gene	other	+	92809	92959	150
trnL-CAA	gene	translation-rna	−	93218	93301	83
trnL-CAA	gene	translation-rna	−	93219	93300	81
ndhB	gene	nad-dehydrogenase	−	93871	96079	2208
rps7	gene	ribosomal-protein	−	96349	96817	468
trnV-GAC	gene	translation-rna	+	99324	99396	72
rrn16	gene	ribosomal-rna	+	99622	101113	1491
trnI-GAU	gene	translation-rna	+	101410	102429	1019
trnA-UGC	gene	translation-rna	+	102493	103372	879
rrn23	rRNA	ribosomal-rna	+	103543	106155	2612
rrn23	gene	ribosomal-rna	+	103543	106354	2811
rrn4.5	gene	ribosomal-rna	+	106452	106555	103
rrn5	gene	ribosomal-rna	+	106810	106931	121
trnR-ACG	gene	translation-rna	+	107174	107248	74
trnR-ACG	gene	translation-rna	+	107174	107249	75
trnN-GUU	gene	translation-rna	−	107813	107886	73
trnN-GUU	gene	translation-rna	−	107813	107887	74
trnN-GUU	gene	translation-rna	−	107814	107886	72
ycf1	gene	other	+	108227	109358	1131
ndhF	gene	nad-dehydrogenase	−	109251	111483	2232
rpl32	gene	ribosomal-protein	+	111951	112122	171
trnL-UAG	gene	translation-rna	+	112886	112966	80
ccsA	gene	other	+	113054	114026	972
ndhD	gene	nad-dehydrogenase	−	114257	115787	1530
psaC	gene	photosystem-i	−	115877	116123	246
ndhE	gene	nad-dehydrogenase	−	116378	116684	306
ndhG	gene	nad-dehydrogenase	−	116898	117429	531
ndhI	gene	nad-dehydrogenase	−	117789	118296	507
ndhA	gene	nad-dehydrogenase	−	118376	120500	2124
ndhH	gene	nad-dehydrogenase	−	120501	121683	1182
rps15	gene	ribosomal-protein	−	121797	122070	273
ycf1	gene	other	−	122499	128022	5523
trnN-GUU	gene	translation-rna	+	128362	128436	74
trnN-GUU	gene	translation-rna	+	128363	128435	72
trnN-GUU	gene	translation-rna	+	128363	128436	73
trnR-ACG	gene	translation-rna	−	129000	129075	75
trnR-ACG	gene	translation-rna	−	129001	129075	74
rrn5	gene	ribosomal-rna	−	129318	129439	121
rrn4.5	gene	ribosomal-rna	−	129694	129797	103
rrn23	gene	ribosomal-rna	−	129896	132706	2810
trnA-UGC	gene	translation-rna	−	132877	133756	879
trnI-GAU	gene	translation-rna	−	133820	134839	1019
rrn16	gene	ribosomal-rna	−	135136	136627	1491
trnV-GAC	gene	translation-rna	−	136853	136925	72
rps7	gene	ribosomal-protein	+	139432	139900	468
ndhB	gene	nad-dehydrogenase	+	140170	142378	2208
trnL-CAA	gene	translation-rna	+	142948	143031	83
trnL-CAA	gene	translation-rna	+	142949	143030	81
ycf15	gene	other	−	143290	143440	150
ycf2	gene	other	−	143629	150460	6831
trnI-CAU	gene	translation-rna	+	150554	150628	74
trnM-CAU	gene	translation-rna	+	150554	150629	75
rpl23	gene	ribosomal-protein	+	150793	151075	282
rpl2	gene	ribosomal-protein	+	151093	152572	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW940491.1