Coordinate-aware organelle record

Isodon trichocarpus chloroplast genome

Available NC_067693.1 152,299 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	396	1455	1059
trnK-UUU	gene	translation-rna	−	1686	4267	2581
matK	gene	other	−	2006	3527	1521
OOB84_pgp086	gene	other	−	4793	5939	1146
trnQ-UUG	gene	translation-rna	−	6884	6956	72
psbK	gene	photosystem-ii	+	7349	7535	186
psbI	gene	photosystem-ii	+	7922	8033	111
trnS-GCU	gene	translation-rna	−	8189	8277	88
trnG-UCC	gene	translation-rna	+	9038	9798	760
trnR-UCU	gene	translation-rna	+	9988	10060	72
atpA	gene	atp-synthase	−	10163	11687	1524
atpF	gene	atp-synthase	−	11795	13042	1247
atpH	gene	atp-synthase	−	13333	13579	246
atpI	gene	atp-synthase	−	14579	15323	744
rps2	gene	ribosomal-protein	−	15553	16264	711
rpoC2	gene	rna-polymerase	−	16481	20663	4182
rpoC1	gene	rna-polymerase	−	20827	23661	2834
rpoB	gene	rna-polymerase	−	23687	26900	3213
trnC-GCA	gene	translation-rna	+	28088	28159	71
petN	gene	cytochrome	+	28321	28411	90
psbM	gene	photosystem-ii	−	28937	29042	105
trnD-GUC	gene	translation-rna	−	29552	29626	74
trnY-GUA	gene	translation-rna	−	29736	29820	84
trnE-UUC	gene	translation-rna	−	29897	29970	73
trnT-GGU	gene	translation-rna	+	30579	30651	72
psbD	gene	photosystem-ii	+	31969	33031	1062
psbC	gene	photosystem-ii	+	32978	34400	1422
trnS-UGA	gene	translation-rna	−	34637	34730	93
psbZ	gene	photosystem-ii	+	35070	35259	189
trnG-GCC	gene	translation-rna	+	35503	35574	71
trnfM-CAU	gene	translation-rna	−	35762	35836	74
rps14	gene	ribosomal-protein	−	35981	36284	303
psaB	gene	photosystem-i	−	36406	38611	2205
psaA	gene	photosystem-i	−	38636	40889	2253
ycf3	gene	other	−	41664	43612	1948
trnS-GGA	gene	translation-rna	+	44473	44560	87
rps4	gene	ribosomal-protein	−	44856	45462	606
trnT-UGU	gene	translation-rna	−	45886	45959	73
trnL-UAA	gene	translation-rna	+	46644	47209	565
trnF-GAA	gene	translation-rna	+	47502	47575	73
ndhJ	gene	nad-dehydrogenase	−	48242	48719	477
ndhK	gene	nad-dehydrogenase	−	48829	49507	678
ndhC	gene	nad-dehydrogenase	−	49558	49921	363
trnV-UAC	gene	translation-rna	−	50877	51533	656
trnM-CAU	gene	translation-rna	+	51713	51786	73
atpE	gene	atp-synthase	−	51986	52388	402
atpB	gene	atp-synthase	−	52384	53881	1497
rbcL	gene	other	+	54671	56105	1434
accD	gene	other	+	56809	58291	1482
psaI	gene	photosystem-i	+	58991	59102	111
ycf4	gene	other	+	59549	60104	555
cemA	gene	other	+	60694	61384	690
petA	gene	cytochrome	+	61598	62561	963
psbJ	gene	photosystem-ii	−	63598	63721	123
psbL	gene	photosystem-ii	−	63855	63972	117
psbF	gene	photosystem-ii	−	63995	64115	120
psbE	gene	photosystem-ii	−	64129	64381	252
petL	gene	cytochrome	+	65272	65368	96
petG	gene	cytochrome	+	65542	65656	114
trnW-CCA	gene	translation-rna	−	65778	65852	74
trnP-UGG	gene	translation-rna	−	66020	66094	74
psaJ	gene	photosystem-i	+	66375	66510	135
rpl33	gene	ribosomal-protein	+	67033	67234	201
rps18	gene	ribosomal-protein	+	67400	67706	306
rpl20	gene	ribosomal-protein	−	67940	68327	387
rps12	gene	ribosomal-protein	−	69059	97281	28222
rps12	gene	ribosomal-protein	+	69059	138996	69937
clpP	gene	other	−	69291	71228	1937
psbB	gene	photosystem-ii	+	71700	73227	1527
psbT	gene	photosystem-ii	+	73411	73513	102
psbN	gene	photosystem-ii	−	73578	73710	132
psbH	gene	photosystem-ii	+	73815	74034	219
petB	gene	cytochrome	+	74159	75526	1367
petD	gene	cytochrome	+	75714	76907	1193
rpoA	gene	rna-polymerase	−	77083	78091	1008
rps11	gene	ribosomal-protein	−	78163	78580	417
rpl36	gene	ribosomal-protein	−	78695	78809	114
infA	gene	other	−	78904	79138	234
rps8	gene	ribosomal-protein	−	79264	79669	405
rpl14	gene	ribosomal-protein	−	79851	80220	369
rpl16	gene	ribosomal-protein	−	80353	81621	1268
rps3	gene	ribosomal-protein	−	81764	82427	663
rpl22	gene	ribosomal-protein	−	82411	82885	474
rps19	gene	ribosomal-protein	−	82949	83228	279
rpl2	gene	ribosomal-protein	−	83295	84774	1479
rpl23	gene	ribosomal-protein	−	84792	85074	282
trnI-CAU	gene	translation-rna	−	85239	85313	74
ycf2	gene	other	+	85407	92238	6831
ycf15	gene	other	+	92427	92577	150
trnL-CAA	gene	translation-rna	−	92837	92918	81
ndhB	gene	nad-dehydrogenase	−	93489	95697	2208
rps7	gene	ribosomal-protein	−	95967	96435	468
trnV-GAC	gene	translation-rna	+	98942	99014	72
rrn16	gene	ribosomal-rna	+	99240	100731	1491
trnI-GAU	gene	translation-rna	+	101028	102047	1019
trnA-UGC	gene	translation-rna	+	102111	102990	879
rrn23	gene	ribosomal-rna	+	103161	105972	2811
rrn4.5	gene	ribosomal-rna	+	106070	106173	103
rrn5	gene	ribosomal-rna	+	106428	106549	121
trnR-ACG	gene	translation-rna	+	106792	106866	74
trnN-GUU	gene	translation-rna	−	107432	107504	72
ycf1	gene	other	+	107845	108976	1131
ndhF	gene	nad-dehydrogenase	−	108869	111101	2232
rpl32	gene	ribosomal-protein	+	111569	111740	171
trnL-UAG	gene	translation-rna	+	112505	112585	80
ccsA	gene	other	+	112673	113645	972
ndhD	gene	nad-dehydrogenase	−	113876	115406	1530
psaC	gene	photosystem-i	−	115496	115742	246
ndhE	gene	nad-dehydrogenase	−	115997	116303	306
ndhG	gene	nad-dehydrogenase	−	116517	117048	531
ndhI	gene	nad-dehydrogenase	−	117406	117913	507
ndhA	gene	nad-dehydrogenase	−	117993	120117	2124
ndhH	gene	nad-dehydrogenase	−	120118	121300	1182
rps15	gene	ribosomal-protein	−	121414	121687	273
ycf1	gene	other	−	122116	127639	5523
trnN-GUU	gene	translation-rna	+	127980	128052	72
trnR-ACG	gene	translation-rna	−	128618	128692	74
rrn5	gene	ribosomal-rna	−	128935	129056	121
rrn4.5	gene	ribosomal-rna	−	129311	129414	103
rrn23	gene	ribosomal-rna	−	129512	132323	2811
trnA-UGC	gene	translation-rna	−	132494	133373	879
trnI-GAU	gene	translation-rna	−	133437	134456	1019
rrn16	gene	ribosomal-rna	−	134753	136244	1491
trnV-GAC	gene	translation-rna	−	136470	136542	72
rps7	gene	ribosomal-protein	+	139049	139517	468
ndhB	gene	nad-dehydrogenase	+	139787	141995	2208
trnL-CAA	gene	translation-rna	+	142566	142647	81
ycf15	gene	other	−	142907	143057	150
ycf2	gene	other	−	143246	150077	6831
trnI-CAU	gene	translation-rna	+	150171	150245	74
rpl23	gene	ribosomal-protein	+	150410	150692	282
rpl2	gene	ribosomal-protein	+	150710	152189	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_067693.1DNA · accDNC_067693DNA · atpBNC_067693DNA · matKNC_067693DNA · ndhFNC_067693DNA · psbANC_067693DNA · rbcLNC_067693DNA · rps12NC_067693DNA · ycf1NC_067693