Isodon wardii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067688.1 · 11–85 bp · −
psbA · NC_067688.1 · 389–1,447 bp · −
trnK-UUU · NC_067688.1 · 1,679–4,259 bp · −
matK · NC_067688.1 · 1,999–3,519 bp · −
ON964_pgp086 · NC_067688.1 · 4,784–5,929 bp · −
trnQ-UUG · NC_067688.1 · 6,875–6,946 bp · −
trnS-GCU · NC_067688.1 · 8,178–8,265 bp · −
atpA · NC_067688.1 · 10,151–11,674 bp · −
atpF · NC_067688.1 · 11,783–13,031 bp · −
atpH · NC_067688.1 · 13,323–13,568 bp · −
atpI · NC_067688.1 · 14,569–15,312 bp · −
rps2 · NC_067688.1 · 15,538–16,248 bp · −
rpoC2 · NC_067688.1 · 16,462–20,643 bp · −
rpoC1 · NC_067688.1 · 20,808–23,641 bp · −
rpoB · NC_067688.1 · 23,668–26,880 bp · −
psbM · NC_067688.1 · 29,375–29,479 bp · −
trnD-GUC · NC_067688.1 · 29,998–30,071 bp · −
trnY-GUA · NC_067688.1 · 30,182–30,265 bp · −
trnE-UUC · NC_067688.1 · 30,343–30,415 bp · −
trnS-UGA · NC_067688.1 · 35,080–35,172 bp · −
trnfM-CAU · NC_067688.1 · 36,206–36,279 bp · −
rps14 · NC_067688.1 · 36,425–36,727 bp · −
psaB · NC_067688.1 · 36,850–39,054 bp · −
psaA · NC_067688.1 · 39,080–41,332 bp · −
ycf3 · NC_067688.1 · 42,129–44,076 bp · −
rps4 · NC_067688.1 · 45,322–45,927 bp · −
trnT-UGU · NC_067688.1 · 46,353–46,425 bp · −
ndhJ · NC_067688.1 · 48,695–49,171 bp · −
ndhK · NC_067688.1 · 49,282–49,959 bp · −
ndhC · NC_067688.1 · 50,011–50,373 bp · −
trnV-UAC · NC_067688.1 · 51,330–51,985 bp · −
atpE · NC_067688.1 · 52,439–52,840 bp · −
atpB · NC_067688.1 · 52,837–54,333 bp · −
psbJ · NC_067688.1 · 64,052–64,174 bp · −
psbL · NC_067688.1 · 64,309–64,425 bp · −
psbF · NC_067688.1 · 64,449–64,568 bp · −
psbE · NC_067688.1 · 64,583–64,834 bp · −
trnW-CCA · NC_067688.1 · 66,233–66,306 bp · −
trnP-UGG · NC_067688.1 · 66,475–66,548 bp · −
rpl20 · NC_067688.1 · 68,334–68,720 bp · −
rps12 · NC_067688.1 · 69,453–69,566 bp · −
rps12 · NC_067688.1 · 96,857–97,649 bp · −
clpP · NC_067688.1 · 69,685–71,601 bp · −
psbN · NC_067688.1 · 73,950–74,081 bp · −
rpoA · NC_067688.1 · 77,453–78,460 bp · −
rps11 · NC_067688.1 · 78,532–78,948 bp · −
rpl36 · NC_067688.1 · 79,064–79,177 bp · −
infA · NC_067688.1 · 79,273–79,506 bp · −
rps8 · NC_067688.1 · 79,633–80,037 bp · −
rpl14 · NC_067688.1 · 80,220–80,588 bp · −
rpl16 · NC_067688.1 · 80,722–81,989 bp · −
rps3 · NC_067688.1 · 82,133–82,795 bp · −
rpl22 · NC_067688.1 · 82,780–83,253 bp · −
rps19 · NC_067688.1 · 83,318–83,596 bp · −
rpl2 · NC_067688.1 · 83,664–85,142 bp · −
rpl23 · NC_067688.1 · 85,161–85,442 bp · −
trnI-CAU · NC_067688.1 · 85,608–85,681 bp · −
trnL-CAA · NC_067688.1 · 93,206–93,286 bp · −
ndhB · NC_067688.1 · 93,858–96,065 bp · −
rps7 · NC_067688.1 · 96,336–96,803 bp · −
trnN-GUU · NC_067688.1 · 107,801–107,872 bp · −
ndhF · NC_067688.1 · 109,238–111,469 bp · −
ndhD · NC_067688.1 · 114,263–115,792 bp · −
psaC · NC_067688.1 · 115,883–116,128 bp · −
ndhE · NC_067688.1 · 116,384–116,689 bp · −
ndhG · NC_067688.1 · 116,904–117,434 bp · −
ndhI · NC_067688.1 · 117,793–118,299 bp · −
ndhA · NC_067688.1 · 118,380–120,496 bp · −
ndhH · NC_067688.1 · 120,498–121,679 bp · −
rps15 · NC_067688.1 · 121,794–122,066 bp · −
ycf1 · NC_067688.1 · 122,496–128,018 bp · −
trnR-ACG · NC_067688.1 · 128,998–129,071 bp · −
rrn5 · NC_067688.1 · 129,315–129,435 bp · −
rrn4.5 · NC_067688.1 · 129,691–129,793 bp · −
rrn23 · NC_067688.1 · 129,892–132,702 bp · −
trnA-UGC · NC_067688.1 · 132,874–133,752 bp · −
trnI-GAU · NC_067688.1 · 133,817–134,835 bp · −
rrn16 · NC_067688.1 · 135,133–136,623 bp · −
trnV-GAC · NC_067688.1 · 136,850–136,921 bp · −
ycf15 · NC_067688.1 · 143,287–143,436 bp · −
ycf2 · NC_067688.1 · 143,626–150,456 bp · −
psbK · NC_067688.1 · 7,340–7,525 bp · +
psbI · NC_067688.1 · 7,912–8,022 bp · +
trnG-UCC · NC_067688.1 · 9,026–9,785 bp · +
trnR-UCU · NC_067688.1 · 9,976–10,047 bp · +
trnC-GCA · NC_067688.1 · 28,068–28,138 bp · +
petN · NC_067688.1 · 28,301–28,390 bp · +
trnT-GGU · NC_067688.1 · 31,025–31,096 bp · +
psbD · NC_067688.1 · 32,414–33,475 bp · +
psbC · NC_067688.1 · 33,423–34,844 bp · +
psbZ · NC_067688.1 · 35,513–35,701 bp · +
trnG-GCC · NC_067688.1 · 35,946–36,016 bp · +
trnS-GGA · NC_067688.1 · 44,939–45,025 bp · +
trnL-UAA · NC_067688.1 · 47,111–47,660 bp · +
trnF-GAA · NC_067688.1 · 47,954–48,026 bp · +
trnM-CAU · NC_067688.1 · 52,166–52,238 bp · +
rbcL · NC_067688.1 · 55,123–56,556 bp · +
accD · NC_067688.1 · 57,261–58,742 bp · +
psaI · NC_067688.1 · 59,444–59,554 bp · +
ycf4 · NC_067688.1 · 60,001–60,555 bp · +
cemA · NC_067688.1 · 61,146–61,835 bp · +
petA · NC_067688.1 · 62,050–63,012 bp · +
petL · NC_067688.1 · 65,727–65,822 bp · +
petG · NC_067688.1 · 65,997–66,110 bp · +
psaJ · NC_067688.1 · 66,830–66,964 bp · +
rpl33 · NC_067688.1 · 67,426–67,626 bp · +
rps18 · NC_067688.1 · 67,793–68,098 bp · +
rps12 · NC_067688.1 · 138,583–139,375 bp · +
psbB · NC_067688.1 · 72,074–73,600 bp · +
psbT · NC_067688.1 · 73,783–73,884 bp · +
psbH · NC_067688.1 · 74,187–74,405 bp · +
petB · NC_067688.1 · 74,531–75,895 bp · +
petD · NC_067688.1 · 76,084–77,276 bp · +
ycf2 · NC_067688.1 · 85,776–92,606 bp · +
ycf15 · NC_067688.1 · 92,796–92,945 bp · +
trnV-GAC · NC_067688.1 · 99,311–99,382 bp · +
rrn16 · NC_067688.1 · 99,609–101,099 bp · +
trnI-GAU · NC_067688.1 · 101,397–102,415 bp · +
trnA-UGC · NC_067688.1 · 102,480–103,358 bp · +
rrn23 · NC_067688.1 · 103,530–106,340 bp · +
rrn4.5 · NC_067688.1 · 106,439–106,541 bp · +
rrn5 · NC_067688.1 · 106,797–106,917 bp · +
trnR-ACG · NC_067688.1 · 107,161–107,234 bp · +
ycf1 · NC_067688.1 · 108,214–109,344 bp · +
rpl32 · NC_067688.1 · 111,945–112,115 bp · +
trnL-UAG · NC_067688.1 · 112,881–112,960 bp · +
ccsA · NC_067688.1 · 113,059–114,030 bp · +
trnN-GUU · NC_067688.1 · 128,360–128,431 bp · +
rps7 · NC_067688.1 · 139,429–139,896 bp · +
ndhB · NC_067688.1 · 140,167–142,374 bp · +
trnL-CAA · NC_067688.1 · 142,946–143,026 bp · +
trnI-CAU · NC_067688.1 · 150,551–150,624 bp · +
rpl23 · NC_067688.1 · 150,790–151,071 bp · +
rpl2 · NC_067688.1 · 151,090–152,568 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon wardii
ANNOTATED PLASTOME
NC_067688.1
152,678 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38170 76339 114508 152678 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK ON964_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 389 1447 1059 Locate
trnK-UUU gene − 1679 4259 2581 Locate
matK gene − 1999 3519 1521 Locate
ON964_pgp086 gene − 4784 5929 1146 Locate
trnQ-UUG gene − 6875 6946 72 Locate
psbK gene + 7340 7525 186 Locate
psbI gene + 7912 8022 111 Locate
trnS-GCU gene − 8178 8265 88 Locate
trnG-UCC gene + 9026 9785 760 Locate
trnR-UCU gene + 9976 10047 72 Locate
atpA gene − 10151 11674 1524 Locate
atpF gene − 11783 13031 1249 Locate
atpH gene − 13323 13568 246 Locate
atpI gene − 14569 15312 744 Locate
rps2 gene − 15538 16248 711 Locate
rpoC2 gene − 16462 20643 4182 Locate
rpoC1 gene − 20808 23641 2834 Locate
rpoB gene − 23668 26880 3213 Locate
trnC-GCA gene + 28068 28138 71 Locate
petN gene + 28301 28390 90 Locate
psbM gene − 29375 29479 105 Locate
trnD-GUC gene − 29998 30071 74 Locate
trnY-GUA gene − 30182 30265 84 Locate
trnE-UUC gene − 30343 30415 73 Locate
trnT-GGU gene + 31025 31096 72 Locate
psbD gene + 32414 33475 1062 Locate
psbC gene + 33423 34844 1422 Locate
trnS-UGA gene − 35080 35172 93 Locate
psbZ gene + 35513 35701 189 Locate
trnG-GCC gene + 35946 36016 71 Locate
trnfM-CAU gene − 36206 36279 74 Locate
rps14 gene − 36425 36727 303 Locate
psaB gene − 36850 39054 2205 Locate
psaA gene − 39080 41332 2253 Locate
ycf3 gene − 42129 44076 1948 Locate
trnS-GGA gene + 44939 45025 87 Locate
rps4 gene − 45322 45927 606 Locate
trnT-UGU gene − 46353 46425 73 Locate
trnL-UAA gene + 47111 47660 550 Locate
trnF-GAA gene + 47954 48026 73 Locate
ndhJ gene − 48695 49171 477 Locate
ndhK gene − 49282 49959 678 Locate
ndhC gene − 50011 50373 363 Locate
trnV-UAC gene − 51330 51985 656 Locate
trnM-CAU gene + 52166 52238 73 Locate
atpE gene − 52439 52840 402 Locate
atpB gene − 52837 54333 1497 Locate
rbcL gene + 55123 56556 1434 Locate
accD gene + 57261 58742 1482 Locate
psaI gene + 59444 59554 111 Locate
ycf4 gene + 60001 60555 555 Locate
cemA gene + 61146 61835 690 Locate
petA gene + 62050 63012 963 Locate
psbJ gene − 64052 64174 123 Locate
psbL gene − 64309 64425 117 Locate
psbF gene − 64449 64568 120 Locate
psbE gene − 64583 64834 252 Locate
petL gene + 65727 65822 96 Locate
petG gene + 65997 66110 114 Locate
trnW-CCA gene − 66233 66306 74 Locate
trnP-UGG gene − 66475 66548 74 Locate
psaJ gene + 66830 66964 135 Locate
rpl33 gene + 67426 67626 201 Locate
rps18 gene + 67793 68098 306 Locate
rpl20 gene − 68334 68720 387 Locate
rps12 gene − 69453 69566 114 Locate
clpP gene − 69685 71601 1917 Locate
psbB gene + 72074 73600 1527 Locate
psbT gene + 73783 73884 102 Locate
psbN gene − 73950 74081 132 Locate
psbH gene + 74187 74405 219 Locate
petB gene + 74531 75895 1365 Locate
petD gene + 76084 77276 1193 Locate
rpoA gene − 77453 78460 1008 Locate
rps11 gene − 78532 78948 417 Locate
rpl36 gene − 79064 79177 114 Locate
infA gene − 79273 79506 234 Locate
rps8 gene − 79633 80037 405 Locate
rpl14 gene − 80220 80588 369 Locate
rpl16 gene − 80722 81989 1268 Locate
rps3 gene − 82133 82795 663 Locate
rpl22 gene − 82780 83253 474 Locate
rps19 gene − 83318 83596 279 Locate
rpl2 gene − 83664 85142 1479 Locate
rpl23 gene − 85161 85442 282 Locate
trnI-CAU gene − 85608 85681 74 Locate
ycf2 gene + 85776 92606 6831 Locate
ycf15 gene + 92796 92945 150 Locate
trnL-CAA gene − 93206 93286 81 Locate
ndhB gene − 93858 96065 2208 Locate
rps7 gene − 96336 96803 468 Locate
rps12 gene − 96857 97649 793 Locate
trnV-GAC gene + 99311 99382 72 Locate
rrn16 gene + 99609 101099 1491 Locate
trnI-GAU gene + 101397 102415 1019 Locate
trnA-UGC gene + 102480 103358 879 Locate
rrn23 gene + 103530 106340 2811 Locate
rrn4.5 gene + 106439 106541 103 Locate
rrn5 gene + 106797 106917 121 Locate
trnR-ACG gene + 107161 107234 74 Locate
trnN-GUU gene − 107801 107872 72 Locate
ycf1 gene + 108214 109344 1131 Locate
ndhF gene − 109238 111469 2232 Locate
rpl32 gene + 111945 112115 171 Locate
trnL-UAG gene + 112881 112960 80 Locate
ccsA gene + 113059 114030 972 Locate
ndhD gene − 114263 115792 1530 Locate
psaC gene − 115883 116128 246 Locate
ndhE gene − 116384 116689 306 Locate
ndhG gene − 116904 117434 531 Locate
ndhI gene − 117793 118299 507 Locate
ndhA gene − 118380 120496 2117 Locate
ndhH gene − 120498 121679 1182 Locate
rps15 gene − 121794 122066 273 Locate
ycf1 gene − 122496 128018 5523 Locate
trnN-GUU gene + 128360 128431 72 Locate
trnR-ACG gene − 128998 129071 74 Locate
rrn5 gene − 129315 129435 121 Locate
rrn4.5 gene − 129691 129793 103 Locate
rrn23 gene − 129892 132702 2811 Locate
trnA-UGC gene − 132874 133752 879 Locate
trnI-GAU gene − 133817 134835 1019 Locate
rrn16 gene − 135133 136623 1491 Locate
trnV-GAC gene − 136850 136921 72 Locate
rps12 gene + 138583 139375 793 Locate
rps7 gene + 139429 139896 468 Locate
ndhB gene + 140167 142374 2208 Locate
trnL-CAA gene + 142946 143026 81 Locate
ycf15 gene − 143287 143436 150 Locate
ycf2 gene − 143626 150456 6831 Locate
trnI-CAU gene + 150551 150624 74 Locate
rpl23 gene + 150790 151071 282 Locate
rpl2 gene + 151090 152568 1479 Locate
Status Available
Accession NC_067688.1
Length 152,678 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources