Isodon yuennanensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_067691.1 · 11–85 bp · −
psbA · NC_067691.1 · 341–1,399 bp · −
trnK-UUU · NC_067691.1 · 1,631–4,210 bp · −
matK · NC_067691.1 · 1,951–3,471 bp · −
OOC78_pgp086 · NC_067691.1 · 4,748–5,888 bp · −
trnQ-UUG · NC_067691.1 · 6,739–6,810 bp · −
trnS-GCU · NC_067691.1 · 8,044–8,131 bp · −
atpA · NC_067691.1 · 9,918–11,441 bp · −
atpF · NC_067691.1 · 11,542–12,790 bp · −
atpH · NC_067691.1 · 13,082–13,327 bp · −
atpI · NC_067691.1 · 14,273–15,016 bp · −
rps2 · NC_067691.1 · 15,242–15,952 bp · −
rpoC2 · NC_067691.1 · 16,166–20,353 bp · −
rpoC1 · NC_067691.1 · 20,518–23,351 bp · −
rpoB · NC_067691.1 · 23,378–26,590 bp · −
psbM · NC_067691.1 · 29,095–29,199 bp · −
trnD-GUC · NC_067691.1 · 29,718–29,791 bp · −
trnY-GUA · NC_067691.1 · 29,902–29,985 bp · −
trnE-UUC · NC_067691.1 · 30,063–30,135 bp · −
trnS-UGA · NC_067691.1 · 34,821–34,913 bp · −
trnfM-CAU · NC_067691.1 · 35,923–35,996 bp · −
rps14 · NC_067691.1 · 36,141–36,443 bp · −
psaB · NC_067691.1 · 36,566–38,770 bp · −
psaA · NC_067691.1 · 38,796–41,048 bp · −
ycf3 · NC_067691.1 · 41,840–43,800 bp · −
rps4 · NC_067691.1 · 45,030–45,635 bp · −
trnT-UGU · NC_067691.1 · 46,018–46,090 bp · −
ndhJ · NC_067691.1 · 48,369–48,845 bp · −
ndhK · NC_067691.1 · 48,956–49,633 bp · −
ndhC · NC_067691.1 · 49,685–50,047 bp · −
trnV-UAC · NC_067691.1 · 51,001–51,658 bp · −
atpE · NC_067691.1 · 52,117–52,518 bp · −
atpB · NC_067691.1 · 52,515–54,011 bp · −
psbJ · NC_067691.1 · 63,683–63,805 bp · −
psbL · NC_067691.1 · 63,940–64,056 bp · −
psbF · NC_067691.1 · 64,080–64,199 bp · −
psbE · NC_067691.1 · 64,214–64,465 bp · −
trnW-CCA · NC_067691.1 · 65,603–65,676 bp · −
trnP-UGG · NC_067691.1 · 65,846–65,919 bp · −
rpl20 · NC_067691.1 · 67,692–68,078 bp · −
rps12 · NC_067691.1 · 68,804–68,917 bp · −
rps12 · NC_067691.1 · 96,175–96,958 bp · −
clpP · NC_067691.1 · 69,036–70,958 bp · −
psbN · NC_067691.1 · 73,309–73,440 bp · −
rpoA · NC_067691.1 · 76,814–77,821 bp · −
rps11 · NC_067691.1 · 77,893–78,309 bp · −
rpl36 · NC_067691.1 · 78,419–78,532 bp · −
infA · NC_067691.1 · 78,628–78,861 bp · −
rps8 · NC_067691.1 · 78,987–79,391 bp · −
rpl14 · NC_067691.1 · 79,563–79,931 bp · −
rpl16 · NC_067691.1 · 80,066–81,333 bp · −
rps3 · NC_067691.1 · 81,486–82,148 bp · −
rpl22 · NC_067691.1 · 82,133–82,606 bp · −
rps19 · NC_067691.1 · 82,671–82,949 bp · −
rpl2 · NC_067691.1 · 83,018–84,496 bp · −
rpl23 · NC_067691.1 · 84,515–84,796 bp · −
trnI-CAU · NC_067691.1 · 84,962–85,035 bp · −
trnL-CAA · NC_067691.1 · 92,533–92,613 bp · −
ndhB · NC_067691.1 · 93,176–95,383 bp · −
rps7 · NC_067691.1 · 95,654–96,121 bp · −
trnN-GUU · NC_067691.1 · 107,101–107,172 bp · −
ndhF · NC_067691.1 · 108,537–110,768 bp · −
ndhD · NC_067691.1 · 113,534–115,063 bp · −
psaC · NC_067691.1 · 115,154–115,399 bp · −
ndhE · NC_067691.1 · 115,655–115,960 bp · −
ndhG · NC_067691.1 · 116,175–116,705 bp · −
ndhI · NC_067691.1 · 117,074–117,580 bp · −
ndhA · NC_067691.1 · 117,661–119,761 bp · −
ndhH · NC_067691.1 · 119,763–120,944 bp · −
rps15 · NC_067691.1 · 121,059–121,322 bp · −
ycf1 · NC_067691.1 · 121,762–127,317 bp · −
trnR-ACG · NC_067691.1 · 128,302–128,375 bp · −
rrn5 · NC_067691.1 · 128,619–128,739 bp · −
rrn4.5 · NC_067691.1 · 128,995–129,097 bp · −
rrn23 · NC_067691.1 · 129,196–132,006 bp · −
trnA-UGC · NC_067691.1 · 132,170–133,048 bp · −
trnI-GAU · NC_067691.1 · 133,113–134,131 bp · −
rrn16 · NC_067691.1 · 134,429–135,919 bp · −
trnV-GAC · NC_067691.1 · 136,146–136,217 bp · −
ycf15 · NC_067691.1 · 142,558–142,707 bp · −
ycf2 · NC_067691.1 · 142,897–149,700 bp · −
psbK · NC_067691.1 · 7,205–7,390 bp · +
psbI · NC_067691.1 · 7,780–7,890 bp · +
trnG-UCC · NC_067691.1 · 8,793–9,552 bp · +
trnR-UCU · NC_067691.1 · 9,742–9,813 bp · +
trnC-GCA · NC_067691.1 · 27,775–27,845 bp · +
petN · NC_067691.1 · 28,008–28,097 bp · +
trnT-GGU · NC_067691.1 · 30,711–30,782 bp · +
psbD · NC_067691.1 · 32,155–33,216 bp · +
psbC · NC_067691.1 · 33,164–34,585 bp · +
psbZ · NC_067691.1 · 35,254–35,442 bp · +
trnG-GCC · NC_067691.1 · 35,680–35,750 bp · +
trnS-GGA · NC_067691.1 · 44,647–44,733 bp · +
trnL-UAA · NC_067691.1 · 46,783–47,326 bp · +
trnF-GAA · NC_067691.1 · 47,626–47,698 bp · +
trnM-CAU · NC_067691.1 · 51,839–51,911 bp · +
rbcL · NC_067691.1 · 54,810–56,255 bp · +
accD · NC_067691.1 · 56,938–58,419 bp · +
psaI · NC_067691.1 · 59,116–59,226 bp · +
ycf4 · NC_067691.1 · 59,671–60,225 bp · +
cemA · NC_067691.1 · 60,811–61,500 bp · +
petA · NC_067691.1 · 61,715–62,677 bp · +
petL · NC_067691.1 · 65,097–65,192 bp · +
petG · NC_067691.1 · 65,367–65,480 bp · +
psaJ · NC_067691.1 · 66,203–66,337 bp · +
rpl33 · NC_067691.1 · 66,785–66,985 bp · +
rps18 · NC_067691.1 · 67,152–67,457 bp · +
rps12 · NC_067691.1 · 137,872–138,655 bp · +
psbB · NC_067691.1 · 71,431–72,957 bp · +
psbT · NC_067691.1 · 73,142–73,243 bp · +
psbH · NC_067691.1 · 73,546–73,764 bp · +
petB · NC_067691.1 · 73,899–75,255 bp · +
petD · NC_067691.1 · 75,444–76,637 bp · +
ycf2 · NC_067691.1 · 85,130–91,933 bp · +
ycf15 · NC_067691.1 · 92,123–92,272 bp · +
trnV-GAC · NC_067691.1 · 98,613–98,684 bp · +
rrn16 · NC_067691.1 · 98,911–100,401 bp · +
trnI-GAU · NC_067691.1 · 100,699–101,717 bp · +
trnA-UGC · NC_067691.1 · 101,782–102,660 bp · +
rrn23 · NC_067691.1 · 102,824–105,634 bp · +
rrn4.5 · NC_067691.1 · 105,733–105,835 bp · +
rrn5 · NC_067691.1 · 106,091–106,211 bp · +
trnR-ACG · NC_067691.1 · 106,455–106,528 bp · +
ycf1 · NC_067691.1 · 107,513–108,643 bp · +
rpl32 · NC_067691.1 · 111,244–111,414 bp · +
trnL-UAG · NC_067691.1 · 112,172–112,251 bp · +
ccsA · NC_067691.1 · 112,339–113,310 bp · +
trnN-GUU · NC_067691.1 · 127,658–127,729 bp · +
rps7 · NC_067691.1 · 138,709–139,176 bp · +
ndhB · NC_067691.1 · 139,447–141,654 bp · +
trnL-CAA · NC_067691.1 · 142,217–142,302 bp · +
trnI-CAU · NC_067691.1 · 149,795–149,868 bp · +
rpl23 · NC_067691.1 · 150,034–150,315 bp · +
rpl2 · NC_067691.1 · 150,334–151,812 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Isodon yuennanensis
ANNOTATED PLASTOME
NC_067691.1
151,923 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
ATP synthase
Ribosomal protein
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37981 75962 113942 151923 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK OOC78_pgp086 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 341 1399 1059 Locate
trnK-UUU gene − 1631 4210 2580 Locate
matK gene − 1951 3471 1521 Locate
OOC78_pgp086 gene − 4748 5888 1141 Locate
trnQ-UUG gene − 6739 6810 72 Locate
psbK gene + 7205 7390 186 Locate
psbI gene + 7780 7890 111 Locate
trnS-GCU gene − 8044 8131 88 Locate
trnG-UCC gene + 8793 9552 760 Locate
trnR-UCU gene + 9742 9813 72 Locate
atpA gene − 9918 11441 1524 Locate
atpF gene − 11542 12790 1249 Locate
atpH gene − 13082 13327 246 Locate
atpI gene − 14273 15016 744 Locate
rps2 gene − 15242 15952 711 Locate
rpoC2 gene − 16166 20353 4188 Locate
rpoC1 gene − 20518 23351 2834 Locate
rpoB gene − 23378 26590 3213 Locate
trnC-GCA gene + 27775 27845 71 Locate
petN gene + 28008 28097 90 Locate
psbM gene − 29095 29199 105 Locate
trnD-GUC gene − 29718 29791 74 Locate
trnY-GUA gene − 29902 29985 84 Locate
trnE-UUC gene − 30063 30135 73 Locate
trnT-GGU gene + 30711 30782 72 Locate
psbD gene + 32155 33216 1062 Locate
psbC gene + 33164 34585 1422 Locate
trnS-UGA gene − 34821 34913 93 Locate
psbZ gene + 35254 35442 189 Locate
trnG-GCC gene + 35680 35750 71 Locate
trnfM-CAU gene − 35923 35996 74 Locate
rps14 gene − 36141 36443 303 Locate
psaB gene − 36566 38770 2205 Locate
psaA gene − 38796 41048 2253 Locate
ycf3 gene − 41840 43800 1961 Locate
trnS-GGA gene + 44647 44733 87 Locate
rps4 gene − 45030 45635 606 Locate
trnT-UGU gene − 46018 46090 73 Locate
trnL-UAA gene + 46783 47326 544 Locate
trnF-GAA gene + 47626 47698 73 Locate
ndhJ gene − 48369 48845 477 Locate
ndhK gene − 48956 49633 678 Locate
ndhC gene − 49685 50047 363 Locate
trnV-UAC gene − 51001 51658 658 Locate
trnM-CAU gene + 51839 51911 73 Locate
atpE gene − 52117 52518 402 Locate
atpB gene − 52515 54011 1497 Locate
rbcL gene + 54810 56255 1446 Locate
accD gene + 56938 58419 1482 Locate
psaI gene + 59116 59226 111 Locate
ycf4 gene + 59671 60225 555 Locate
cemA gene + 60811 61500 690 Locate
petA gene + 61715 62677 963 Locate
psbJ gene − 63683 63805 123 Locate
psbL gene − 63940 64056 117 Locate
psbF gene − 64080 64199 120 Locate
psbE gene − 64214 64465 252 Locate
petL gene + 65097 65192 96 Locate
petG gene + 65367 65480 114 Locate
trnW-CCA gene − 65603 65676 74 Locate
trnP-UGG gene − 65846 65919 74 Locate
psaJ gene + 66203 66337 135 Locate
rpl33 gene + 66785 66985 201 Locate
rps18 gene + 67152 67457 306 Locate
rpl20 gene − 67692 68078 387 Locate
rps12 gene − 68804 68917 114 Locate
clpP gene − 69036 70958 1923 Locate
psbB gene + 71431 72957 1527 Locate
psbT gene + 73142 73243 102 Locate
psbN gene − 73309 73440 132 Locate
psbH gene + 73546 73764 219 Locate
petB gene + 73899 75255 1357 Locate
petD gene + 75444 76637 1194 Locate
rpoA gene − 76814 77821 1008 Locate
rps11 gene − 77893 78309 417 Locate
rpl36 gene − 78419 78532 114 Locate
infA gene − 78628 78861 234 Locate
rps8 gene − 78987 79391 405 Locate
rpl14 gene − 79563 79931 369 Locate
rpl16 gene − 80066 81333 1268 Locate
rps3 gene − 81486 82148 663 Locate
rpl22 gene − 82133 82606 474 Locate
rps19 gene − 82671 82949 279 Locate
rpl2 gene − 83018 84496 1479 Locate
rpl23 gene − 84515 84796 282 Locate
trnI-CAU gene − 84962 85035 74 Locate
ycf2 gene + 85130 91933 6804 Locate
ycf15 gene + 92123 92272 150 Locate
trnL-CAA gene − 92533 92613 81 Locate
ndhB gene − 93176 95383 2208 Locate
rps7 gene − 95654 96121 468 Locate
rps12 gene − 96175 96958 784 Locate
trnV-GAC gene + 98613 98684 72 Locate
rrn16 gene + 98911 100401 1491 Locate
trnI-GAU gene + 100699 101717 1019 Locate
trnA-UGC gene + 101782 102660 879 Locate
rrn23 gene + 102824 105634 2811 Locate
rrn4.5 gene + 105733 105835 103 Locate
rrn5 gene + 106091 106211 121 Locate
trnR-ACG gene + 106455 106528 74 Locate
trnN-GUU gene − 107101 107172 72 Locate
ycf1 gene + 107513 108643 1131 Locate
ndhF gene − 108537 110768 2232 Locate
rpl32 gene + 111244 111414 171 Locate
trnL-UAG gene + 112172 112251 80 Locate
ccsA gene + 112339 113310 972 Locate
ndhD gene − 113534 115063 1530 Locate
psaC gene − 115154 115399 246 Locate
ndhE gene − 115655 115960 306 Locate
ndhG gene − 116175 116705 531 Locate
ndhI gene − 117074 117580 507 Locate
ndhA gene − 117661 119761 2101 Locate
ndhH gene − 119763 120944 1182 Locate
rps15 gene − 121059 121322 264 Locate
ycf1 gene − 121762 127317 5556 Locate
trnN-GUU gene + 127658 127729 72 Locate
trnR-ACG gene − 128302 128375 74 Locate
rrn5 gene − 128619 128739 121 Locate
rrn4.5 gene − 128995 129097 103 Locate
rrn23 gene − 129196 132006 2811 Locate
trnA-UGC gene − 132170 133048 879 Locate
trnI-GAU gene − 133113 134131 1019 Locate
rrn16 gene − 134429 135919 1491 Locate
trnV-GAC gene − 136146 136217 72 Locate
rps12 gene + 137872 138655 784 Locate
rps7 gene + 138709 139176 468 Locate
ndhB gene + 139447 141654 2208 Locate
trnL-CAA gene + 142217 142302 86 Locate
ycf15 gene − 142558 142707 150 Locate
ycf2 gene − 142897 149700 6804 Locate
trnI-CAU gene + 149795 149868 74 Locate
rpl23 gene + 150034 150315 282 Locate
rpl2 gene + 150334 151812 1479 Locate
Status Available
Accession NC_067691.1
Length 151,923 bp
GC content 37.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Atp Synthase 6 Ribosomal Protein 25 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources