Lagochilus seravschanicus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PQ126530.1 · 2–75 bp · −
psbA · PQ126530.1 · 307–1,365 bp · −
trnK-UUU · PQ126530.1 · 1,598–4,184 bp · −
matK · PQ126530.1 · 1,899–3,434 bp · −
rps16 · PQ126530.1 · 4,903–6,041 bp · −
trnQ-UUG · PQ126530.1 · 7,055–7,126 bp · −
trnS-GCU · PQ126530.1 · 8,260–8,347 bp · −
atpA · PQ126530.1 · 10,096–11,619 bp · −
atpF · PQ126530.1 · 11,708–12,921 bp · −
atpH · PQ126530.1 · 13,281–13,526 bp · −
atpI · PQ126530.1 · 14,486–15,229 bp · −
rps2 · PQ126530.1 · 15,460–16,170 bp · −
rpoC2 · PQ126530.1 · 16,492–20,574 bp · −
rpoC1 · PQ126530.1 · 20,729–23,556 bp · −
rpoB · PQ126530.1 · 23,583–26,795 bp · −
psbM · PQ126530.1 · 29,656–29,760 bp · −
trnD-GUC · PQ126530.1 · 30,297–30,370 bp · −
trnY-GUA · PQ126530.1 · 30,484–30,567 bp · −
trnE-UUC · PQ126530.1 · 30,627–30,699 bp · −
trnS-TGA · PQ126530.1 · 35,275–35,367 bp · −
trnM-CAU · PQ126530.1 · 36,324–36,397 bp · −
rps14 · PQ126530.1 · 36,547–36,849 bp · −
psaB · PQ126530.1 · 36,977–39,181 bp · −
psaA · PQ126530.1 · 39,207–41,459 bp · −
ycf3 · PQ126530.1 · 42,037–43,982 bp · −
rps4 · PQ126530.1 · 44,669–45,274 bp · −
trnT-UGU · PQ126530.1 · 45,670–45,742 bp · −
ndhJ · PQ126530.1 · 48,021–48,497 bp · −
ndhK · PQ126530.1 · 48,598–49,275 bp · −
ndhC · PQ126530.1 · 49,328–49,690 bp · −
trnV-UAC · PQ126530.1 · 50,647–51,299 bp · −
atpE · PQ126530.1 · 51,778–52,179 bp · −
atpB · PQ126530.1 · 52,176–53,672 bp · −
psbJ · PQ126530.1 · 63,025–63,147 bp · −
psbL · PQ126530.1 · 63,285–63,401 bp · −
psbF · PQ126530.1 · 63,425–63,544 bp · −
psbE · PQ126530.1 · 63,559–63,810 bp · −
trnW-CCA · PQ126530.1 · 65,270–65,343 bp · −
trnP-UGG · PQ126530.1 · 65,511–65,584 bp · −
rpl20 · PQ126530.1 · 67,340–67,726 bp · −
rps12 · PQ126530.1 · 68,486–68,599 bp · −
rps12 · PQ126530.1 · 95,829–96,622 bp · −
clpP · PQ126530.1 · 68,725–70,596 bp · −
psbN · PQ126530.1 · 72,903–73,034 bp · −
rpoA · PQ126530.1 · 76,465–77,478 bp · −
rps11 · PQ126530.1 · 77,550–77,966 bp · −
rpl36 · PQ126530.1 · 78,069–78,182 bp · −
infA · PQ126530.1 · 78,278–78,511 bp · −
rps8 · PQ126530.1 · 78,633–79,046 bp · −
rpl14 · PQ126530.1 · 79,219–79,587 bp · −
rpl16 · PQ126530.1 · 79,714–81,006 bp · −
rps3 · PQ126530.1 · 81,153–81,815 bp · −
rpl22 · PQ126530.1 · 81,800–82,273 bp · −
rps19 · PQ126530.1 · 82,333–82,401 bp · −
rpl2 · PQ126530.1 · 82,663–84,154 bp · −
rpl23 · PQ126530.1 · 84,173–84,454 bp · −
trnL-CAA · PQ126530.1 · 92,197–92,277 bp · −
ndhB · PQ126530.1 · 92,822–95,033 bp · −
rps7 · PQ126530.1 · 95,308–95,775 bp · −
rrn16 · PQ126530.1 · 98,541–100,033 bp · −
rrn23 · PQ126530.1 · 102,470–105,280 bp · −
rrn4.5 · PQ126530.1 · 105,379–105,643 bp · −
trnN-GUU · PQ126530.1 · 106,739–106,810 bp · −
ndhF · PQ126530.1 · 108,200–110,422 bp · −
ndhD · PQ126530.1 · 113,141–114,556 bp · −
psaC · PQ126530.1 · 114,768–115,013 bp · −
ndhE · PQ126530.1 · 115,273–115,578 bp · −
ndhG · PQ126530.1 · 115,794–116,324 bp · −
ndhI · PQ126530.1 · 116,689–117,195 bp · −
ndhA · PQ126530.1 · 117,282–119,436 bp · −
ndhH · PQ126530.1 · 119,438–120,619 bp · −
rps15 · PQ126530.1 · 120,720–120,992 bp · −
ycf1 · PQ126530.1 · 121,418–126,934 bp · −
trnR-ACG · PQ126530.1 · 127,905–127,978 bp · −
rrn5 · PQ126530.1 · 128,203–128,333 bp · −
trnA-UGC · PQ126530.1 · 131,792–132,670 bp · −
trnI-GAU · PQ126530.1 · 132,735–133,749 bp · −
trnV-GAC · PQ126530.1 · 135,757–135,828 bp · −
ycf15 · PQ126530.1 · 142,134–142,157 bp · −
ycf2 · PQ126530.1 · 142,422–149,288 bp · −
trnI-CAU · PQ126530.1 · 149,377–149,450 bp · −
psbK · PQ126530.1 · 7,463–7,648 bp · +
psbI · PQ126530.1 · 8,023–8,133 bp · +
trnG-UCC · PQ126530.1 · 8,992–9,751 bp · +
trnR-UCU · PQ126530.1 · 9,928–9,999 bp · +
trnC-GCA · PQ126530.1 · 27,883–27,953 bp · +
petN · PQ126530.1 · 28,777–28,872 bp · +
trnT-GGU · PQ126530.1 · 31,289–31,360 bp · +
psbD · PQ126530.1 · 32,614–33,675 bp · +
psbC · PQ126530.1 · 33,623–35,044 bp · +
psbZ · PQ126530.1 · 35,694–35,882 bp · +
trnG-GCC · PQ126530.1 · 36,108–36,178 bp · +
trnS-GGA · PQ126530.1 · 44,298–44,384 bp · +
trnL-UAA · PQ126530.1 · 46,420–46,999 bp · +
trnF-GAA · PQ126530.1 · 47,291–47,363 bp · +
trnM-CAU · PQ126530.1 · 51,488–51,560 bp · +
rbcL · PQ126530.1 · 54,489–55,934 bp · +
accD · PQ126530.1 · 56,641–58,107 bp · +
psaI · PQ126530.1 · 58,459–58,569 bp · +
ycf4 · PQ126530.1 · 58,999–59,553 bp · +
cemA · PQ126530.1 · 60,114–60,803 bp · +
petA · PQ126530.1 · 61,020–61,982 bp · +
petL · PQ126530.1 · 64,753–64,848 bp · +
petG · PQ126530.1 · 65,023–65,136 bp · +
psaJ · PQ126530.1 · 65,858–65,992 bp · +
rpl33 · PQ126530.1 · 66,465–66,665 bp · +
rps18 · PQ126530.1 · 66,823–67,128 bp · +
rps12 · PQ126530.1 · 137,448–138,241 bp · +
psbB · PQ126530.1 · 71,017–72,543 bp · +
psbT · PQ126530.1 · 72,735–72,842 bp · +
psbH · PQ126530.1 · 73,138–73,359 bp · +
petB · PQ126530.1 · 73,484–74,868 bp · +
petD · PQ126530.1 · 75,063–76,296 bp · +
trnI-CAU · PQ126530.1 · 84,620–84,693 bp · +
ycf2 · PQ126530.1 · 84,782–91,648 bp · +
ycf15 · PQ126530.1 · 91,913–91,936 bp · +
trnV-GAC · PQ126530.1 · 98,242–98,313 bp · +
trnI-GAU · PQ126530.1 · 100,321–101,335 bp · +
trnA-UGC · PQ126530.1 · 101,400–102,278 bp · +
rrn5 · PQ126530.1 · 105,737–105,867 bp · +
trnR-ACG · PQ126530.1 · 106,092–106,165 bp · +
ycf1 · PQ126530.1 · 107,136–108,254 bp · +
rpl32 · PQ126530.1 · 110,927–111,103 bp · +
trnL-UAG · PQ126530.1 · 111,830–111,909 bp · +
ccsA · PQ126530.1 · 112,000–112,971 bp · +
trnN-GUU · PQ126530.1 · 127,260–127,331 bp · +
rrn4.5 · PQ126530.1 · 128,427–128,691 bp · +
rrn23 · PQ126530.1 · 128,790–131,600 bp · +
rrn16 · PQ126530.1 · 134,037–135,529 bp · +
rps7 · PQ126530.1 · 138,295–138,762 bp · +
ndhB · PQ126530.1 · 139,037–141,248 bp · +
trnL-CAA · PQ126530.1 · 141,793–141,873 bp · +
rpl23 · PQ126530.1 · 149,616–149,897 bp · +
rpl2 · PQ126530.1 · 149,916–151,407 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Lagochilus seravschanicus
ANNOTATED PLASTOME
PQ126530.1
151,500 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37875 75750 113625 151500 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD trnI-CAU ycf2 ycf15 trnV-GAC trnI-GAU trnA-UGC rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rrn4.5 rrn23 rrn16 rps12 rps7 ndhB trnL-CAA rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-TGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnL-CAA ndhB rps7 rps12 rrn16 rrn23 rrn4.5 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 trnA-UGC trnI-GAU trnV-GAC ycf15 ycf2 trnI-CAU
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 307 1365 1059 Locate
trnK-UUU gene − 1598 4184 2587 Locate
matK gene − 1899 3434 1536 Locate
rps16 gene − 4903 6041 1139 Locate
trnQ-UUG gene − 7055 7126 72 Locate
psbK gene + 7463 7648 186 Locate
psbI gene + 8023 8133 111 Locate
trnS-GCU gene − 8260 8347 88 Locate
trnG-UCC gene + 8992 9751 760 Locate
trnR-UCU gene + 9928 9999 72 Locate
atpA gene − 10096 11619 1524 Locate
atpF gene − 11708 12921 1214 Locate
atpH gene − 13281 13526 246 Locate
atpI gene − 14486 15229 744 Locate
rps2 gene − 15460 16170 711 Locate
rpoC2 gene − 16492 20574 4083 Locate
rpoC1 gene − 20729 23556 2828 Locate
rpoB gene − 23583 26795 3213 Locate
trnC-GCA gene + 27883 27953 71 Locate
petN gene + 28777 28872 96 Locate
psbM gene − 29656 29760 105 Locate
trnD-GUC gene − 30297 30370 74 Locate
trnY-GUA gene − 30484 30567 84 Locate
trnE-UUC gene − 30627 30699 73 Locate
trnT-GGU gene + 31289 31360 72 Locate
psbD gene + 32614 33675 1062 Locate
psbC gene + 33623 35044 1422 Locate
trnS-TGA gene − 35275 35367 93 Locate
psbZ gene + 35694 35882 189 Locate
trnG-GCC gene + 36108 36178 71 Locate
trnM-CAU gene − 36324 36397 74 Locate
rps14 gene − 36547 36849 303 Locate
psaB gene − 36977 39181 2205 Locate
psaA gene − 39207 41459 2253 Locate
ycf3 gene − 42037 43982 1946 Locate
trnS-GGA gene + 44298 44384 87 Locate
rps4 gene − 44669 45274 606 Locate
trnT-UGU gene − 45670 45742 73 Locate
trnL-UAA gene + 46420 46999 580 Locate
trnF-GAA gene + 47291 47363 73 Locate
ndhJ gene − 48021 48497 477 Locate
ndhK gene − 48598 49275 678 Locate
ndhC gene − 49328 49690 363 Locate
trnV-UAC gene − 50647 51299 653 Locate
trnM-CAU gene + 51488 51560 73 Locate
atpE gene − 51778 52179 402 Locate
atpB gene − 52176 53672 1497 Locate
rbcL gene + 54489 55934 1446 Locate
accD gene + 56641 58107 1467 Locate
psaI gene + 58459 58569 111 Locate
ycf4 gene + 58999 59553 555 Locate
cemA gene + 60114 60803 690 Locate
petA gene + 61020 61982 963 Locate
psbJ gene − 63025 63147 123 Locate
psbL gene − 63285 63401 117 Locate
psbF gene − 63425 63544 120 Locate
psbE gene − 63559 63810 252 Locate
petL gene + 64753 64848 96 Locate
petG gene + 65023 65136 114 Locate
trnW-CCA gene − 65270 65343 74 Locate
trnP-UGG gene − 65511 65584 74 Locate
psaJ gene + 65858 65992 135 Locate
rpl33 gene + 66465 66665 201 Locate
rps18 gene + 66823 67128 306 Locate
rpl20 gene − 67340 67726 387 Locate
rps12 gene − 68486 68599 114 Locate
clpP gene − 68725 70596 1872 Locate
psbB gene + 71017 72543 1527 Locate
psbT gene + 72735 72842 108 Locate
psbN gene − 72903 73034 132 Locate
psbH gene + 73138 73359 222 Locate
petB gene + 73484 74868 1385 Locate
petD gene + 75063 76296 1234 Locate
rpoA gene − 76465 77478 1014 Locate
rps11 gene − 77550 77966 417 Locate
rpl36 gene − 78069 78182 114 Locate
infA gene − 78278 78511 234 Locate
rps8 gene − 78633 79046 414 Locate
rpl14 gene − 79219 79587 369 Locate
rpl16 gene − 79714 81006 1293 Locate
rps3 gene − 81153 81815 663 Locate
rpl22 gene − 81800 82273 474 Locate
rps19 gene − 82333 82401 69 Locate
rpl2 gene − 82663 84154 1492 Locate
rpl23 gene − 84173 84454 282 Locate
trnI-CAU gene + 84620 84693 74 Locate
ycf2 gene + 84782 91648 6867 Locate
ycf15 gene + 91913 91936 24 Locate
trnL-CAA gene − 92197 92277 81 Locate
ndhB gene − 92822 95033 2212 Locate
rps7 gene − 95308 95775 468 Locate
rps12 gene − 95829 96622 794 Locate
trnV-GAC gene + 98242 98313 72 Locate
rrn16 gene − 98541 100033 1493 Locate
trnI-GAU gene + 100321 101335 1015 Locate
trnA-UGC gene + 101400 102278 879 Locate
rrn23 gene − 102470 105280 2811 Locate
rrn4.5 gene − 105379 105643 265 Locate
rrn5 gene + 105737 105867 131 Locate
trnR-ACG gene + 106092 106165 74 Locate
trnN-GUU gene − 106739 106810 72 Locate
ycf1 gene + 107136 108254 1119 Locate
ndhF gene − 108200 110422 2223 Locate
rpl32 gene + 110927 111103 177 Locate
trnL-UAG gene + 111830 111909 80 Locate
ccsA gene + 112000 112971 972 Locate
ndhD gene − 113141 114556 1416 Locate
psaC gene − 114768 115013 246 Locate
ndhE gene − 115273 115578 306 Locate
ndhG gene − 115794 116324 531 Locate
ndhI gene − 116689 117195 507 Locate
ndhA gene − 117282 119436 2155 Locate
ndhH gene − 119438 120619 1182 Locate
rps15 gene − 120720 120992 273 Locate
ycf1 gene − 121418 126934 5517 Locate
trnN-GUU gene + 127260 127331 72 Locate
trnR-ACG gene − 127905 127978 74 Locate
rrn5 gene − 128203 128333 131 Locate
rrn4.5 gene + 128427 128691 265 Locate
rrn23 gene + 128790 131600 2811 Locate
trnA-UGC gene − 131792 132670 879 Locate
trnI-GAU gene − 132735 133749 1015 Locate
rrn16 gene + 134037 135529 1493 Locate
trnV-GAC gene − 135757 135828 72 Locate
rps12 gene + 137448 138241 794 Locate
rps7 gene + 138295 138762 468 Locate
ndhB gene + 139037 141248 2212 Locate
trnL-CAA gene + 141793 141873 81 Locate
ycf15 gene − 142134 142157 24 Locate
ycf2 gene − 142422 149288 6867 Locate
trnI-CAU gene − 149377 149450 74 Locate
rpl23 gene + 149616 149897 282 Locate
rpl2 gene + 149916 151407 1492 Locate
Status Available
Accession PQ126530.1
Length 151,500 bp
GC content 38.6%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources