Lamium orvala chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PP336767.1 · 1–75 bp · −
psbA · PP336767.1 · 306–1,364 bp · −
trnK-UUU · PP336767.1 · 1,595–4,191 bp · −
matK · PP336767.1 · 1,904–3,439 bp · −
rps16 · PP336767.1 · 5,086–6,226 bp · −
trnQ-UUG · PP336767.1 · 7,235–7,307 bp · −
trnS-GCU · PP336767.1 · 8,414–8,501 bp · −
atpA · PP336767.1 · 10,164–11,687 bp · −
atpF · PP336767.1 · 11,807–13,016 bp · −
atpH · PP336767.1 · 13,372–13,617 bp · −
atpI · PP336767.1 · 14,613–15,356 bp · −
rps2 · PP336767.1 · 15,587–16,297 bp · −
rpoC2 · PP336767.1 · 16,674–20,726 bp · −
rpoC1 · PP336767.1 · 20,883–23,707 bp · −
rpoB · PP336767.1 · 23,734–26,946 bp · −
psbM · PP336767.1 · 29,657–29,761 bp · −
trnD-GUC · PP336767.1 · 30,291–30,367 bp · −
trnY-GUA · PP336767.1 · 30,481–30,566 bp · −
trnE-UUC · PP336767.1 · 30,625–30,697 bp · −
trnS-UGA · PP336767.1 · 35,235–35,327 bp · −
trnM-CAU · PP336767.1 · 36,283–36,357 bp · −
rps14 · PP336767.1 · 36,507–36,809 bp · −
psaB · PP336767.1 · 36,937–39,141 bp · −
psaA · PP336767.1 · 39,167–41,419 bp · −
ycf3 · PP336767.1 · 42,145–44,081 bp · −
rps4 · PP336767.1 · 44,770–45,375 bp · −
trnT-UGU · PP336767.1 · 45,763–45,837 bp · −
ndhJ · PP336767.1 · 48,111–48,587 bp · −
ndhK · PP336767.1 · 48,688–49,365 bp · −
ndhC · PP336767.1 · 49,419–49,781 bp · −
trnV-UAC · PP336767.1 · 50,728–51,376 bp · −
atpE · PP336767.1 · 51,858–52,259 bp · −
atpB · PP336767.1 · 52,256–53,752 bp · −
psbJ · PP336767.1 · 63,294–63,416 bp · −
psbL · PP336767.1 · 63,554–63,670 bp · −
psbF · PP336767.1 · 63,694–63,813 bp · −
psbE · PP336767.1 · 63,828–64,079 bp · −
trnW-CCA · PP336767.1 · 65,522–65,595 bp · −
trnP-UGG · PP336767.1 · 65,757–65,832 bp · −
rpl20 · PP336767.1 · 67,580–67,966 bp · −
rps12 · PP336767.1 · 68,709–68,822 bp · −
rps12 · PP336767.1 · 95,919–96,712 bp · −
clpP1 · PP336767.1 · 68,949–70,828 bp · −
psbN · PP336767.1 · 73,153–73,284 bp · −
rpoA · PP336767.1 · 76,648–77,688 bp · −
rps11 · PP336767.1 · 77,760–78,176 bp · −
rpl36 · PP336767.1 · 78,279–78,392 bp · −
infA · PP336767.1 · 78,488–78,721 bp · −
rps8 · PP336767.1 · 78,844–79,257 bp · −
rpl14 · PP336767.1 · 79,424–79,792 bp · −
rpl16 · PP336767.1 · 79,920–81,211 bp · −
rps3 · PP336767.1 · 81,358–82,020 bp · −
rpl22 · PP336767.1 · 82,005–82,469 bp · −
rps19 · PP336767.1 · 82,529–82,807 bp · −
rpl2 · PP336767.1 · 82,860–84,351 bp · −
rpl23 · PP336767.1 · 84,370–84,651 bp · −
trnM-CAU · PP336767.1 · 84,816–84,890 bp · −
trnL-CAA · PP336767.1 · 92,285–92,367 bp · −
ndhB · PP336767.1 · 92,911–95,122 bp · −
rps7 · PP336767.1 · 95,398–95,865 bp · −
trnN-GUU · PP336767.1 · 106,804–106,877 bp · −
ndhF · PP336767.1 · 108,266–110,488 bp · −
ndhD · PP336767.1 · 113,194–114,696 bp · −
psaC · PP336767.1 · 114,811–115,056 bp · −
ndhE · PP336767.1 · 115,319–115,624 bp · −
ndhG · PP336767.1 · 115,852–116,382 bp · −
ndhI · PP336767.1 · 116,774–117,280 bp · −
ndhA · PP336767.1 · 117,367–119,536 bp · −
ndhH · PP336767.1 · 119,538–120,719 bp · −
rps15 · PP336767.1 · 120,820–121,092 bp · −
ycf1 · PP336767.1 · 121,476–126,932 bp · −
trnR-ACG · PP336767.1 · 127,890–127,964 bp · −
rrn5 · PP336767.1 · 128,199–128,319 bp · −
rrn4.5 · PP336767.1 · 128,571–128,673 bp · −
rrn23 · PP336767.1 · 128,772–131,582 bp · −
trnA-UGC · PP336767.1 · 131,783–132,661 bp · −
trnI-GAU · PP336767.1 · 132,726–133,729 bp · −
rrn16 · PP336767.1 · 134,025–135,515 bp · −
trnV-GAC · PP336767.1 · 135,743–135,814 bp · −
ycf15 · PP336767.1 · 142,109–142,357 bp · −
ycf2 · PP336767.1 · 142,400–149,155 bp · −
psbK · PP336767.1 · 7,644–7,805 bp · +
psbI · PP336767.1 · 8,191–8,301 bp · +
trnG-UCC · PP336767.1 · 9,066–9,826 bp · +
trnR-UCU · PP336767.1 · 9,993–10,067 bp · +
trnC-GCA · PP336767.1 · 28,053–28,128 bp · +
petN · PP336767.1 · 28,960–29,049 bp · +
trnT-GGU · PP336767.1 · 31,269–31,342 bp · +
psbD · PP336767.1 · 32,572–33,633 bp · +
psbC · PP336767.1 · 33,581–35,002 bp · +
psbZ · PP336767.1 · 35,655–35,843 bp · +
trnG-GCC · PP336767.1 · 36,068–36,139 bp · +
trnS-GGA · PP336767.1 · 44,398–44,484 bp · +
trnL-UAA · PP336767.1 · 46,514–47,080 bp · +
trnF-GAA · PP336767.1 · 47,378–47,451 bp · +
trnM-CAU · PP336767.1 · 51,568–51,640 bp · +
rbcL · PP336767.1 · 54,569–56,032 bp · +
accD · PP336767.1 · 56,730–58,187 bp · +
psaI · PP336767.1 · 58,874–58,984 bp · +
ycf3 · PP336767.1 · 59,424–59,978 bp · +
cemA · PP336767.1 · 60,407–61,096 bp · +
petA · PP336767.1 · 61,321–62,283 bp · +
petL · PP336767.1 · 65,013–65,108 bp · +
petG · PP336767.1 · 65,283–65,396 bp · +
psaJ · PP336767.1 · 66,106–66,240 bp · +
rpl33 · PP336767.1 · 66,714–66,914 bp · +
rps18 · PP336767.1 · 67,062–67,367 bp · +
rps12 · PP336767.1 · 137,422–138,215 bp · +
psbB · PP336767.1 · 71,266–72,792 bp · +
psbT · PP336767.1 · 72,985–73,092 bp · +
psbH · PP336767.1 · 73,388–73,609 bp · +
petB · PP336767.1 · 73,734–75,101 bp · +
petD · PP336767.1 · 75,296–76,509 bp · +
ycf2 · PP336767.1 · 84,979–91,734 bp · +
ycf15 · PP336767.1 · 91,777–92,025 bp · +
trnV-GAC · PP336767.1 · 98,320–98,391 bp · +
rrn16 · PP336767.1 · 98,619–100,109 bp · +
trnI-GAU · PP336767.1 · 100,405–101,408 bp · +
trnA-UGC · PP336767.1 · 101,473–102,351 bp · +
rrn23 · PP336767.1 · 102,552–105,362 bp · +
rrn4.5 · PP336767.1 · 105,461–105,563 bp · +
rrn5 · PP336767.1 · 105,815–105,935 bp · +
trnR-ACG · PP336767.1 · 106,170–106,244 bp · +
ycf1 · PP336767.1 · 107,202–108,320 bp · +
rpl32 · PP336767.1 · 110,989–111,165 bp · +
trnL-UAG · PP336767.1 · 111,878–111,957 bp · +
ccsA · PP336767.1 · 112,041–113,012 bp · +
trnN-GUU · PP336767.1 · 127,257–127,330 bp · +
rps7 · PP336767.1 · 138,269–138,736 bp · +
ndhB · PP336767.1 · 139,012–141,223 bp · +
trnL-CAA · PP336767.1 · 141,767–141,849 bp · +
trnM-CAU · PP336767.1 · 149,244–149,318 bp · +
rpl23 · PP336767.1 · 149,483–149,764 bp · +
rpl2 · PP336767.1 · 149,783–151,274 bp · +
rps19 · PP336767.1 · 151,327–151,368 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Lamium orvala
ANNOTATED PLASTOME
PP336767.1
151,368 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37842 75684 113526 151368 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf3 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP1 psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 1 75 75 Locate
psbA gene − 306 1364 1059 Locate
trnK-UUU gene − 1595 4191 2597 Locate
matK gene − 1904 3439 1536 Locate
rps16 gene − 5086 6226 1141 Locate
trnQ-UUG gene − 7235 7307 73 Locate
psbK gene + 7644 7805 162 Locate
psbI gene + 8191 8301 111 Locate
trnS-GCU gene − 8414 8501 88 Locate
trnG-UCC gene + 9066 9826 761 Locate
trnR-UCU gene + 9993 10067 75 Locate
atpA gene − 10164 11687 1524 Locate
atpF gene − 11807 13016 1210 Locate
atpH gene − 13372 13617 246 Locate
atpI gene − 14613 15356 744 Locate
rps2 gene − 15587 16297 711 Locate
rpoC2 gene − 16674 20726 4053 Locate
rpoC1 gene − 20883 23707 2825 Locate
rpoB gene − 23734 26946 3213 Locate
trnC-GCA gene + 28053 28128 76 Locate
petN gene + 28960 29049 90 Locate
psbM gene − 29657 29761 105 Locate
trnD-GUC gene − 30291 30367 77 Locate
trnY-GUA gene − 30481 30566 86 Locate
trnE-UUC gene − 30625 30697 73 Locate
trnT-GGU gene + 31269 31342 74 Locate
psbD gene + 32572 33633 1062 Locate
psbC gene + 33581 35002 1422 Locate
trnS-UGA gene − 35235 35327 93 Locate
psbZ gene + 35655 35843 189 Locate
trnG-GCC gene + 36068 36139 72 Locate
trnM-CAU gene − 36283 36357 75 Locate
rps14 gene − 36507 36809 303 Locate
psaB gene − 36937 39141 2205 Locate
psaA gene − 39167 41419 2253 Locate
ycf3 gene − 42145 44081 1937 Locate
trnS-GGA gene + 44398 44484 87 Locate
rps4 gene − 44770 45375 606 Locate
trnT-UGU gene − 45763 45837 75 Locate
trnL-UAA gene + 46514 47080 567 Locate
trnF-GAA gene + 47378 47451 74 Locate
ndhJ gene − 48111 48587 477 Locate
ndhK gene − 48688 49365 678 Locate
ndhC gene − 49419 49781 363 Locate
trnV-UAC gene − 50728 51376 649 Locate
trnM-CAU gene + 51568 51640 73 Locate
atpE gene − 51858 52259 402 Locate
atpB gene − 52256 53752 1497 Locate
rbcL gene + 54569 56032 1464 Locate
accD gene + 56730 58187 1458 Locate
psaI gene + 58874 58984 111 Locate
ycf3 gene + 59424 59978 555 Locate
cemA gene + 60407 61096 690 Locate
petA gene + 61321 62283 963 Locate
psbJ gene − 63294 63416 123 Locate
psbL gene − 63554 63670 117 Locate
psbF gene − 63694 63813 120 Locate
psbE gene − 63828 64079 252 Locate
petL gene + 65013 65108 96 Locate
petG gene + 65283 65396 114 Locate
trnW-CCA gene − 65522 65595 74 Locate
trnP-UGG gene − 65757 65832 76 Locate
psaJ gene + 66106 66240 135 Locate
rpl33 gene + 66714 66914 201 Locate
rps18 gene + 67062 67367 306 Locate
rpl20 gene − 67580 67966 387 Locate
rps12 gene − 68709 68822 114 Locate
clpP1 gene − 68949 70828 1880 Locate
psbB gene + 71266 72792 1527 Locate
psbT gene + 72985 73092 108 Locate
psbN gene − 73153 73284 132 Locate
psbH gene + 73388 73609 222 Locate
petB gene + 73734 75101 1368 Locate
petD gene + 75296 76509 1214 Locate
rpoA gene − 76648 77688 1041 Locate
rps11 gene − 77760 78176 417 Locate
rpl36 gene − 78279 78392 114 Locate
infA gene − 78488 78721 234 Locate
rps8 gene − 78844 79257 414 Locate
rpl14 gene − 79424 79792 369 Locate
rpl16 gene − 79920 81211 1292 Locate
rps3 gene − 81358 82020 663 Locate
rpl22 gene − 82005 82469 465 Locate
rps19 gene − 82529 82807 279 Locate
rpl2 gene − 82860 84351 1492 Locate
rpl23 gene − 84370 84651 282 Locate
trnM-CAU gene − 84816 84890 75 Locate
ycf2 gene + 84979 91734 6756 Locate
ycf15 gene + 91777 92025 249 Locate
trnL-CAA gene − 92285 92367 83 Locate
ndhB gene − 92911 95122 2212 Locate
rps7 gene − 95398 95865 468 Locate
rps12 gene − 95919 96712 794 Locate
trnV-GAC gene + 98320 98391 72 Locate
rrn16 gene + 98619 100109 1491 Locate
trnI-GAU gene + 100405 101408 1004 Locate
trnA-UGC gene + 101473 102351 879 Locate
rrn23 gene + 102552 105362 2811 Locate
rrn4.5 gene + 105461 105563 103 Locate
rrn5 gene + 105815 105935 121 Locate
trnR-ACG gene + 106170 106244 75 Locate
trnN-GUU gene − 106804 106877 74 Locate
ycf1 gene + 107202 108320 1119 Locate
ndhF gene − 108266 110488 2223 Locate
rpl32 gene + 110989 111165 177 Locate
trnL-UAG gene + 111878 111957 80 Locate
ccsA gene + 112041 113012 972 Locate
ndhD gene − 113194 114696 1503 Locate
psaC gene − 114811 115056 246 Locate
ndhE gene − 115319 115624 306 Locate
ndhG gene − 115852 116382 531 Locate
ndhI gene − 116774 117280 507 Locate
ndhA gene − 117367 119536 2170 Locate
ndhH gene − 119538 120719 1182 Locate
rps15 gene − 120820 121092 273 Locate
ycf1 gene − 121476 126932 5457 Locate
trnN-GUU gene + 127257 127330 74 Locate
trnR-ACG gene − 127890 127964 75 Locate
rrn5 gene − 128199 128319 121 Locate
rrn4.5 gene − 128571 128673 103 Locate
rrn23 gene − 128772 131582 2811 Locate
trnA-UGC gene − 131783 132661 879 Locate
trnI-GAU gene − 132726 133729 1004 Locate
rrn16 gene − 134025 135515 1491 Locate
trnV-GAC gene − 135743 135814 72 Locate
rps12 gene + 137422 138215 794 Locate
rps7 gene + 138269 138736 468 Locate
ndhB gene + 139012 141223 2212 Locate
trnL-CAA gene + 141767 141849 83 Locate
ycf15 gene − 142109 142357 249 Locate
ycf2 gene − 142400 149155 6756 Locate
trnM-CAU gene + 149244 149318 75 Locate
rpl23 gene + 149483 149764 282 Locate
rpl2 gene + 149783 151274 1492 Locate
rps19 gene + 151327 151368 42 Locate
Status Available
Accession PP336767.1
Length 151,368 bp
GC content 38.6%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources