Leonotis leonurus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_086629.1 · 3–76 bp · −
psbA · NC_086629.1 · 306–1,364 bp · −
matK · NC_086629.1 · 1,892–3,427 bp · −
rps16 · NC_086629.1 · 5,062–6,203 bp · −
trnQ-UUG · NC_086629.1 · 7,154–7,225 bp · −
trnS-GCU · NC_086629.1 · 8,363–8,450 bp · −
atpA · NC_086629.1 · 10,218–11,741 bp · −
atpF · NC_086629.1 · 11,848–13,057 bp · −
atpH · NC_086629.1 · 13,425–13,670 bp · −
atpI · NC_086629.1 · 14,659–15,402 bp · −
rps2 · NC_086629.1 · 15,627–16,337 bp · −
rpoC2 · NC_086629.1 · 16,561–20,748 bp · −
rpoC1 · NC_086629.1 · 20,903–23,735 bp · −
rpoB · NC_086629.1 · 23,762–26,974 bp · −
psbM · NC_086629.1 · 29,827–29,931 bp · −
trnD-GUC · NC_086629.1 · 30,461–30,534 bp · −
trnY-GUA · NC_086629.1 · 30,649–30,732 bp · −
trnE-UUC · NC_086629.1 · 30,792–30,864 bp · −
trnS-UGA · NC_086629.1 · 35,330–35,422 bp · −
trnfM-CAU · NC_086629.1 · 36,384–36,457 bp · −
rps14 · NC_086629.1 · 36,607–36,909 bp · −
psaB · NC_086629.1 · 37,036–39,240 bp · −
psaA · NC_086629.1 · 39,266–41,518 bp · −
ycf3 · NC_086629.1 · 42,203–44,139 bp · −
rps4 · NC_086629.1 · 44,822–45,427 bp · −
trnT-UGU · NC_086629.1 · 45,816–45,888 bp · −
ndhJ · NC_086629.1 · 48,150–48,626 bp · −
ndhK · NC_086629.1 · 48,727–49,404 bp · −
ndhC · NC_086629.1 · 49,458–49,820 bp · −
trnV-UAC · NC_086629.1 · 50,790–51,442 bp · −
atpE · NC_086629.1 · 51,916–52,317 bp · −
atpB · NC_086629.1 · 52,314–53,810 bp · −
psbJ · NC_086629.1 · 63,416–63,538 bp · −
psbL · NC_086629.1 · 63,676–63,792 bp · −
psbF · NC_086629.1 · 63,816–63,935 bp · −
psbE · NC_086629.1 · 63,950–64,201 bp · −
trnW-CCA · NC_086629.1 · 65,643–65,716 bp · −
trnP-UGG · NC_086629.1 · 65,871–65,944 bp · −
rpl20 · NC_086629.1 · 67,687–68,073 bp · −
rps12 · NC_086629.1 · 68,820–68,933 bp · −
rps12 · NC_086629.1 · 96,647–96,889 bp · −
clpP · NC_086629.1 · 69,066–70,941 bp · −
psbN · NC_086629.1 · 73,262–73,393 bp · −
rpoA · NC_086629.1 · 76,792–77,805 bp · −
rps11 · NC_086629.1 · 77,877–78,293 bp · −
rpl36 · NC_086629.1 · 78,396–78,509 bp · −
infA · NC_086629.1 · 78,605–78,838 bp · −
rps8 · NC_086629.1 · 78,960–79,373 bp · −
rpl14 · NC_086629.1 · 79,546–79,914 bp · −
rpl16 · NC_086629.1 · 80,041–81,335 bp · −
rps3 · NC_086629.1 · 81,478–82,140 bp · −
rpl22 · NC_086629.1 · 82,125–82,592 bp · −
rps19 · NC_086629.1 · 82,652–82,930 bp · −
rpl2 · NC_086629.1 · 82,981–84,472 bp · −
rpl23 · NC_086629.1 · 84,491–84,763 bp · −
trnL-CAA · NC_086629.1 · 92,470–92,550 bp · −
ndhB · NC_086629.1 · 93,089–95,301 bp · −
rps7 · NC_086629.1 · 95,576–96,043 bp · −
rrn16 · NC_086629.1 · 98,774–100,266 bp · −
rrn23 · NC_086629.1 · 102,705–105,514 bp · −
rrn4.5 · NC_086629.1 · 105,613–105,877 bp · −
trnN-GUU · NC_086629.1 · 106,970–107,041 bp · −
ndhF · NC_086629.1 · 108,431–110,653 bp · −
ndhD · NC_086629.1 · 113,409–114,812 bp · −
psaC · NC_086629.1 · 115,025–115,270 bp · −
ndhE · NC_086629.1 · 115,533–115,838 bp · −
ndhG · NC_086629.1 · 116,054–116,584 bp · −
ndhI · NC_086629.1 · 116,959–117,465 bp · −
ndhA · NC_086629.1 · 117,552–119,685 bp · −
ndhH · NC_086629.1 · 119,687–120,868 bp · −
rps15 · NC_086629.1 · 120,969–121,241 bp · −
ycf1 · NC_086629.1 · 121,621–124,929 bp · −
trnR-ACG · NC_086629.1 · 128,078–128,151 bp · −
rrn5 · NC_086629.1 · 128,376–128,506 bp · −
trnA-UGC · NC_086629.1 · 131,964–132,850 bp · −
trnI-GAU · NC_086629.1 · 132,915–133,923 bp · −
trnV-GAC · NC_086629.1 · 135,921–135,992 bp · −
ycf15 · NC_086629.1 · 142,268–142,465 bp · −
ycf2 · NC_086629.1 · 142,559–146,992 bp · −
trnI-CAU · NC_086629.1 · 149,471–149,544 bp · −
trnK-UUU · NC_086629.1 · 1,596–4,166 bp · +
psbK · NC_086629.1 · 7,562–7,747 bp · +
psbI · NC_086629.1 · 8,137–8,247 bp · +
trnG-UCC · NC_086629.1 · 9,119–9,874 bp · +
trnR-UCU · NC_086629.1 · 10,050–10,121 bp · +
trnC-GCA · NC_086629.1 · 28,048–28,118 bp · +
petN · NC_086629.1 · 28,953–29,048 bp · +
trnT-GGU · NC_086629.1 · 31,456–31,527 bp · +
psbD · NC_086629.1 · 32,667–33,728 bp · +
psbC · NC_086629.1 · 33,676–35,097 bp · +
psbZ · NC_086629.1 · 35,746–35,934 bp · +
trnG-GCC · NC_086629.1 · 36,158–36,228 bp · +
trnS-GGA · NC_086629.1 · 44,454–44,540 bp · +
trnL-UAA · NC_086629.1 · 46,563–47,134 bp · +
trnF-GAA · NC_086629.1 · 47,419–47,491 bp · +
trnM-CAU · NC_086629.1 · 51,631–51,703 bp · +
rbcL · NC_086629.1 · 54,620–56,065 bp · +
accD · NC_086629.1 · 56,758–58,230 bp · +
psaI · NC_086629.1 · 58,909–59,019 bp · +
ycf4 · NC_086629.1 · 59,458–60,012 bp · +
cemA · NC_086629.1 · 60,568–61,254 bp · +
petA · NC_086629.1 · 61,469–62,431 bp · +
petL · NC_086629.1 · 65,134–65,229 bp · +
petG · NC_086629.1 · 65,404–65,517 bp · +
psaJ · NC_086629.1 · 66,219–66,353 bp · +
rpl33 · NC_086629.1 · 66,823–67,023 bp · +
rps18 · NC_086629.1 · 67,165–67,470 bp · +
rps12 · NC_086629.1 · 137,588–137,830 bp · +
psbB · NC_086629.1 · 71,379–72,905 bp · +
psbT · NC_086629.1 · 73,095–73,196 bp · +
psbH · NC_086629.1 · 73,497–73,718 bp · +
petB · NC_086629.1 · 73,843–75,219 bp · +
petD · NC_086629.1 · 75,414–76,629 bp · +
trnI-CAU · NC_086629.1 · 84,933–85,006 bp · +
ycf2 · NC_086629.1 · 87,485–91,918 bp · +
ycf15 · NC_086629.1 · 92,012–92,209 bp · +
trnV-GAC · NC_086629.1 · 98,485–98,556 bp · +
trnI-GAU · NC_086629.1 · 100,554–101,562 bp · +
trnA-UGC · NC_086629.1 · 101,627–102,513 bp · +
rrn5 · NC_086629.1 · 105,971–106,101 bp · +
trnR-ACG · NC_086629.1 · 106,326–106,399 bp · +
ycf1 · NC_086629.1 · 107,367–108,497 bp · +
rpl32 · NC_086629.1 · 111,183–111,359 bp · +
trnL-UAG · NC_086629.1 · 112,091–112,170 bp · +
ccsA · NC_086629.1 · 112,256–113,227 bp · +
trnN-GUU · NC_086629.1 · 127,436–127,507 bp · +
rrn4.5 · NC_086629.1 · 128,600–128,864 bp · +
rrn23 · NC_086629.1 · 128,963–131,772 bp · +
rrn16 · NC_086629.1 · 134,211–135,703 bp · +
rps7 · NC_086629.1 · 138,434–138,901 bp · +
ndhB · NC_086629.1 · 139,176–141,388 bp · +
trnL-CAA · NC_086629.1 · 141,927–142,007 bp · +
rpl23 · NC_086629.1 · 149,714–149,986 bp · +
rpl2 · NC_086629.1 · 150,005–151,496 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Leonotis leonurus
ANNOTATED PLASTOME
NC_086629.1
151,587 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37897 75794 113690 151587 bp
Forward strand 5′ → 3′
trnK-UUU psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD trnI-CAU ycf2 ycf15 trnV-GAC trnI-GAU trnA-UGC rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rrn4.5 rrn23 rrn16 rps12 rps7 ndhB trnL-CAA rpl23 rpl2
trnH-GUG psbA matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnL-CAA ndhB rps7 rps12 rrn16 rrn23 rrn4.5 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 trnA-UGC trnI-GAU trnV-GAC ycf15 ycf2 trnI-CAU
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 306 1364 1059 Locate
trnK-UUU gene + 1596 4166 2571 Locate
matK gene − 1892 3427 1536 Locate
rps16 gene − 5062 6203 1142 Locate
trnQ-UUG gene − 7154 7225 72 Locate
psbK gene + 7562 7747 186 Locate
psbI gene + 8137 8247 111 Locate
trnS-GCU gene − 8363 8450 88 Locate
trnG-UCC gene + 9119 9874 756 Locate
trnR-UCU gene + 10050 10121 72 Locate
atpA gene − 10218 11741 1524 Locate
atpF gene − 11848 13057 1210 Locate
atpH gene − 13425 13670 246 Locate
atpI gene − 14659 15402 744 Locate
rps2 gene − 15627 16337 711 Locate
rpoC2 gene − 16561 20748 4188 Locate
rpoC1 gene − 20903 23735 2833 Locate
rpoB gene − 23762 26974 3213 Locate
trnC-GCA gene + 28048 28118 71 Locate
petN gene + 28953 29048 96 Locate
psbM gene − 29827 29931 105 Locate
trnD-GUC gene − 30461 30534 74 Locate
trnY-GUA gene − 30649 30732 84 Locate
trnE-UUC gene − 30792 30864 73 Locate
trnT-GGU gene + 31456 31527 72 Locate
psbD gene + 32667 33728 1062 Locate
psbC gene + 33676 35097 1422 Locate
trnS-UGA gene − 35330 35422 93 Locate
psbZ gene + 35746 35934 189 Locate
trnG-GCC gene + 36158 36228 71 Locate
trnfM-CAU gene − 36384 36457 74 Locate
rps14 gene − 36607 36909 303 Locate
psaB gene − 37036 39240 2205 Locate
psaA gene − 39266 41518 2253 Locate
ycf3 gene − 42203 44139 1937 Locate
trnS-GGA gene + 44454 44540 87 Locate
rps4 gene − 44822 45427 606 Locate
trnT-UGU gene − 45816 45888 73 Locate
trnL-UAA gene + 46563 47134 572 Locate
trnF-GAA gene + 47419 47491 73 Locate
ndhJ gene − 48150 48626 477 Locate
ndhK gene − 48727 49404 678 Locate
ndhC gene − 49458 49820 363 Locate
trnV-UAC gene − 50790 51442 653 Locate
trnM-CAU gene + 51631 51703 73 Locate
atpE gene − 51916 52317 402 Locate
atpB gene − 52314 53810 1497 Locate
rbcL gene + 54620 56065 1446 Locate
accD gene + 56758 58230 1473 Locate
psaI gene + 58909 59019 111 Locate
ycf4 gene + 59458 60012 555 Locate
cemA gene + 60568 61254 687 Locate
petA gene + 61469 62431 963 Locate
psbJ gene − 63416 63538 123 Locate
psbL gene − 63676 63792 117 Locate
psbF gene − 63816 63935 120 Locate
psbE gene − 63950 64201 252 Locate
petL gene + 65134 65229 96 Locate
petG gene + 65404 65517 114 Locate
trnW-CCA gene − 65643 65716 74 Locate
trnP-UGG gene − 65871 65944 74 Locate
psaJ gene + 66219 66353 135 Locate
rpl33 gene + 66823 67023 201 Locate
rps18 gene + 67165 67470 306 Locate
rpl20 gene − 67687 68073 387 Locate
rps12 gene − 68820 68933 114 Locate
clpP gene − 69066 70941 1876 Locate
psbB gene + 71379 72905 1527 Locate
psbT gene + 73095 73196 102 Locate
psbN gene − 73262 73393 132 Locate
psbH gene + 73497 73718 222 Locate
petB gene + 73843 75219 1377 Locate
petD gene + 75414 76629 1216 Locate
rpoA gene − 76792 77805 1014 Locate
rps11 gene − 77877 78293 417 Locate
rpl36 gene − 78396 78509 114 Locate
infA gene − 78605 78838 234 Locate
rps8 gene − 78960 79373 414 Locate
rpl14 gene − 79546 79914 369 Locate
rpl16 gene − 80041 81335 1295 Locate
rps3 gene − 81478 82140 663 Locate
rpl22 gene − 82125 82592 468 Locate
rps19 gene − 82652 82930 279 Locate
rpl2 gene − 82981 84472 1492 Locate
rpl23 gene − 84491 84763 273 Locate
trnI-CAU gene + 84933 85006 74 Locate
ycf2 gene + 87485 91918 4434 Locate
ycf15 gene + 92012 92209 198 Locate
trnL-CAA gene − 92470 92550 81 Locate
ndhB gene − 93089 95301 2213 Locate
rps7 gene − 95576 96043 468 Locate
rps12 gene − 96647 96889 243 Locate
trnV-GAC gene + 98485 98556 72 Locate
rrn16 gene − 98774 100266 1493 Locate
trnI-GAU gene + 100554 101562 1009 Locate
trnA-UGC gene + 101627 102513 887 Locate
rrn23 gene − 102705 105514 2810 Locate
rrn4.5 gene − 105613 105877 265 Locate
rrn5 gene + 105971 106101 131 Locate
trnR-ACG gene + 106326 106399 74 Locate
trnN-GUU gene − 106970 107041 72 Locate
ycf1 gene + 107367 108497 1131 Locate
ndhF gene − 108431 110653 2223 Locate
rpl32 gene + 111183 111359 177 Locate
trnL-UAG gene + 112091 112170 80 Locate
ccsA gene + 112256 113227 972 Locate
ndhD gene − 113409 114812 1404 Locate
psaC gene − 115025 115270 246 Locate
ndhE gene − 115533 115838 306 Locate
ndhG gene − 116054 116584 531 Locate
ndhI gene − 116959 117465 507 Locate
ndhA gene − 117552 119685 2134 Locate
ndhH gene − 119687 120868 1182 Locate
rps15 gene − 120969 121241 273 Locate
ycf1 gene − 121621 124929 3309 Locate
trnN-GUU gene + 127436 127507 72 Locate
trnR-ACG gene − 128078 128151 74 Locate
rrn5 gene − 128376 128506 131 Locate
rrn4.5 gene + 128600 128864 265 Locate
rrn23 gene + 128963 131772 2810 Locate
trnA-UGC gene − 131964 132850 887 Locate
trnI-GAU gene − 132915 133923 1009 Locate
rrn16 gene + 134211 135703 1493 Locate
trnV-GAC gene − 135921 135992 72 Locate
rps12 gene + 137588 137830 243 Locate
rps7 gene + 138434 138901 468 Locate
ndhB gene + 139176 141388 2213 Locate
trnL-CAA gene + 141927 142007 81 Locate
ycf15 gene − 142268 142465 198 Locate
ycf2 gene − 142559 146992 4434 Locate
trnI-CAU gene − 149471 149544 74 Locate
rpl23 gene + 149714 149986 273 Locate
rpl2 gene + 150005 151496 1492 Locate
Status Available
Accession NC_086629.1
Length 151,587 bp
GC content 38.7%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources