Matsumurella chinensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PP056237.1 · 2–75 bp · −
psbA · PP056237.1 · 316–1,374 bp · −
trnK-UUU · PP056237.1 · 1,607–4,194 bp · −
matK · PP056237.1 · 1,911–3,446 bp · −
rps16 · PP056237.1 · 5,016–6,157 bp · −
trnQ-UUG · PP056237.1 · 7,100–7,171 bp · −
trnS-GCU · PP056237.1 · 8,303–8,390 bp · −
atpA · PP056237.1 · 10,180–11,703 bp · −
atpF · PP056237.1 · 11,791–13,010 bp · −
atpH · PP056237.1 · 13,377–13,622 bp · −
atpI · PP056237.1 · 14,622–15,365 bp · −
rps2 · PP056237.1 · 15,596–16,306 bp · −
rpoC2 · PP056237.1 · 16,527–20,714 bp · −
rpoC1 · PP056237.1 · 20,869–23,700 bp · −
rpoB · PP056237.1 · 23,727–26,939 bp · −
psbM · PP056237.1 · 29,835–29,939 bp · −
trnD-GUC · PP056237.1 · 30,462–30,535 bp · −
trnY-GUA · PP056237.1 · 30,651–30,734 bp · −
trnE-UUC · PP056237.1 · 30,794–30,866 bp · −
trnS-UGA · PP056237.1 · 35,237–35,329 bp · −
trnfM-CAU · PP056237.1 · 36,293–36,366 bp · −
rps14 · PP056237.1 · 36,516–36,818 bp · −
psaB · PP056237.1 · 36,946–39,150 bp · −
psaA · PP056237.1 · 39,176–41,428 bp · −
ycf3 · PP056237.1 · 42,151–44,106 bp · −
rps4 · PP056237.1 · 44,806–45,411 bp · −
trnT-UGU · PP056237.1 · 45,804–45,876 bp · −
ndhJ · PP056237.1 · 48,150–48,626 bp · −
ndhK · PP056237.1 · 48,727–49,488 bp · −
ndhC · PP056237.1 · 49,458–49,820 bp · −
trnV-UAC · PP056237.1 · 50,786–51,433 bp · −
atpE · PP056237.1 · 51,912–52,313 bp · −
atpB · PP056237.1 · 52,310–53,806 bp · −
psbJ · PP056237.1 · 63,471–63,593 bp · −
psbL · PP056237.1 · 63,731–63,847 bp · −
psbF · PP056237.1 · 63,871–63,990 bp · −
psbE · PP056237.1 · 64,005–64,256 bp · −
trnW-CCA · PP056237.1 · 65,696–65,769 bp · −
trnP-UGG · PP056237.1 · 65,939–66,012 bp · −
rpl20 · PP056237.1 · 67,766–68,152 bp · −
rps12 · PP056237.1 · 68,921–69,034 bp · −
rps12 · PP056237.1 · 96,310–97,103 bp · −
clpP · PP056237.1 · 69,161–71,044 bp · −
psbN · PP056237.1 · 73,362–73,493 bp · −
rpoA · PP056237.1 · 76,926–77,939 bp · −
rps11 · PP056237.1 · 78,011–78,442 bp · −
rpl36 · PP056237.1 · 78,530–78,643 bp · −
infA · PP056237.1 · 78,739–78,972 bp · −
rps8 · PP056237.1 · 79,095–79,508 bp · −
rpl14 · PP056237.1 · 79,700–80,068 bp · −
rpl16 · PP056237.1 · 80,195–81,497 bp · −
rps3 · PP056237.1 · 81,644–82,306 bp · −
rpl22 · PP056237.1 · 82,291–82,755 bp · −
rps19 · PP056237.1 · 82,815–83,087 bp · −
rpl2 · PP056237.1 · 83,146–84,637 bp · −
rpl23 · PP056237.1 · 84,656–84,937 bp · −
trnI-CAU · PP056237.1 · 85,103–85,176 bp · −
trnL-CAA · PP056237.1 · 92,683–92,763 bp · −
ndhB · PP056237.1 · 93,303–95,514 bp · −
rps7 · PP056237.1 · 95,789–96,256 bp · −
trnN-GUU · PP056237.1 · 107,204–107,275 bp · −
ndhF · PP056237.1 · 108,665–110,887 bp · −
ndhD · PP056237.1 · 113,608–115,110 bp · −
psaC · PP056237.1 · 115,227–115,472 bp · −
ndhE · PP056237.1 · 115,735–116,037 bp · −
ndhG · PP056237.1 · 116,262–116,792 bp · −
ndhI · PP056237.1 · 117,165–117,671 bp · −
ndhA · PP056237.1 · 117,758–119,923 bp · −
ndhH · PP056237.1 · 119,925–121,106 bp · −
rps15 · PP056237.1 · 121,207–121,542 bp · −
ycf1 · PP056237.1 · 121,860–127,406 bp · −
trnR-ACG · PP056237.1 · 128,370–128,443 bp · −
rrn5 · PP056237.1 · 128,678–128,798 bp · −
rrn4.5 · PP056237.1 · 129,054–129,156 bp · −
rrn23 · PP056237.1 · 129,257–132,065 bp · −
trnA-UGC · PP056237.1 · 132,257–133,135 bp · −
trnI-GAU · PP056237.1 · 133,200–134,208 bp · −
rrn16 · PP056237.1 · 134,498–135,988 bp · −
trnV-GAC · PP056237.1 · 136,216–136,287 bp · −
ycf15 · PP056237.1 · 142,585–142,782 bp · −
ycf2 · PP056237.1 · 142,876–149,742 bp · −
psbK · PP056237.1 · 7,508–7,693 bp · +
psbI · PP056237.1 · 8,069–8,179 bp · +
trnG-UCC · PP056237.1 · 9,076–9,835 bp · +
trnR-UCU · PP056237.1 · 10,012–10,083 bp · +
trnC-GCA · PP056237.1 · 28,047–28,117 bp · +
petN · PP056237.1 · 28,965–29,054 bp · +
trnT-GGU · PP056237.1 · 31,452–31,523 bp · +
psbD · PP056237.1 · 32,576–33,637 bp · +
psbC · PP056237.1 · 33,585–35,006 bp · +
psbZ · PP056237.1 · 35,655–35,843 bp · +
trnG-GCC · PP056237.1 · 36,073–36,143 bp · +
trnS-GGA · PP056237.1 · 44,436–44,522 bp · +
trnL-UAA · PP056237.1 · 46,549–47,122 bp · +
trnF-GAA · PP056237.1 · 47,414–47,486 bp · +
trnM-CAU · PP056237.1 · 51,622–51,694 bp · +
rbcL · PP056237.1 · 54,588–56,054 bp · +
accD · PP056237.1 · 56,744–58,210 bp · +
psaI · PP056237.1 · 58,896–59,006 bp · +
ycf4 · PP056237.1 · 59,442–59,996 bp · +
cemA · PP056237.1 · 60,557–61,246 bp · +
petA · PP056237.1 · 61,463–62,425 bp · +
petL · PP056237.1 · 65,188–65,283 bp · +
petG · PP056237.1 · 65,457–65,570 bp · +
psaJ · PP056237.1 · 66,288–66,422 bp · +
rpl33 · PP056237.1 · 66,896–67,096 bp · +
rps18 · PP056237.1 · 67,244–67,549 bp · +
rps12 · PP056237.1 · 137,904–138,697 bp · +
psbB · PP056237.1 · 71,482–73,008 bp · +
psbT · PP056237.1 · 73,194–73,301 bp · +
psbH · PP056237.1 · 73,597–73,818 bp · +
petB · PP056237.1 · 73,943–75,324 bp · +
petD · PP056237.1 · 75,527–76,748 bp · +
ycf2 · PP056237.1 · 85,265–92,131 bp · +
ycf15 · PP056237.1 · 92,225–92,422 bp · +
trnV-GAC · PP056237.1 · 98,720–98,791 bp · +
rrn16 · PP056237.1 · 99,019–100,509 bp · +
trnI-GAU · PP056237.1 · 100,799–101,807 bp · +
trnA-UGC · PP056237.1 · 101,872–102,750 bp · +
rrn23 · PP056237.1 · 102,942–105,750 bp · +
rrn4.5 · PP056237.1 · 105,851–105,953 bp · +
rrn5 · PP056237.1 · 106,209–106,329 bp · +
trnR-ACG · PP056237.1 · 106,564–106,637 bp · +
rpl32 · PP056237.1 · 111,393–111,569 bp · +
trnL-UAG · PP056237.1 · 112,292–112,371 bp · +
ccsA · PP056237.1 · 112,456–113,427 bp · +
trnN-GUU · PP056237.1 · 127,732–127,803 bp · +
rps7 · PP056237.1 · 138,751–139,218 bp · +
ndhB · PP056237.1 · 139,493–141,704 bp · +
trnL-CAA · PP056237.1 · 142,244–142,324 bp · +
trnI-CAU · PP056237.1 · 149,831–149,904 bp · +
rpl23 · PP056237.1 · 150,070–150,351 bp · +
rpl2 · PP056237.1 · 150,370–151,861 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Matsumurella chinensis
ANNOTATED PLASTOME
PP056237.1
151,955 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37989 75978 113966 151955 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 316 1374 1059 Locate
trnK-UUU gene − 1607 4194 2588 Locate
matK gene − 1911 3446 1536 Locate
rps16 gene − 5016 6157 1142 Locate
trnQ-UUG gene − 7100 7171 72 Locate
psbK gene + 7508 7693 186 Locate
psbI gene + 8069 8179 111 Locate
trnS-GCU gene − 8303 8390 88 Locate
trnG-UCC gene + 9076 9835 760 Locate
trnR-UCU gene + 10012 10083 72 Locate
atpA gene − 10180 11703 1524 Locate
atpF gene − 11791 13010 1220 Locate
atpH gene − 13377 13622 246 Locate
atpI gene − 14622 15365 744 Locate
rps2 gene − 15596 16306 711 Locate
rpoC2 gene − 16527 20714 4188 Locate
rpoC1 gene − 20869 23700 2832 Locate
rpoB gene − 23727 26939 3213 Locate
trnC-GCA gene + 28047 28117 71 Locate
petN gene + 28965 29054 90 Locate
psbM gene − 29835 29939 105 Locate
trnD-GUC gene − 30462 30535 74 Locate
trnY-GUA gene − 30651 30734 84 Locate
trnE-UUC gene − 30794 30866 73 Locate
trnT-GGU gene + 31452 31523 72 Locate
psbD gene + 32576 33637 1062 Locate
psbC gene + 33585 35006 1422 Locate
trnS-UGA gene − 35237 35329 93 Locate
psbZ gene + 35655 35843 189 Locate
trnG-GCC gene + 36073 36143 71 Locate
trnfM-CAU gene − 36293 36366 74 Locate
rps14 gene − 36516 36818 303 Locate
psaB gene − 36946 39150 2205 Locate
psaA gene − 39176 41428 2253 Locate
ycf3 gene − 42151 44106 1956 Locate
trnS-GGA gene + 44436 44522 87 Locate
rps4 gene − 44806 45411 606 Locate
trnT-UGU gene − 45804 45876 73 Locate
trnL-UAA gene + 46549 47122 574 Locate
trnF-GAA gene + 47414 47486 73 Locate
ndhJ gene − 48150 48626 477 Locate
ndhK gene − 48727 49488 762 Locate
ndhC gene − 49458 49820 363 Locate
trnV-UAC gene − 50786 51433 648 Locate
trnM-CAU gene + 51622 51694 73 Locate
atpE gene − 51912 52313 402 Locate
atpB gene − 52310 53806 1497 Locate
rbcL gene + 54588 56054 1467 Locate
accD gene + 56744 58210 1467 Locate
psaI gene + 58896 59006 111 Locate
ycf4 gene + 59442 59996 555 Locate
cemA gene + 60557 61246 690 Locate
petA gene + 61463 62425 963 Locate
psbJ gene − 63471 63593 123 Locate
psbL gene − 63731 63847 117 Locate
psbF gene − 63871 63990 120 Locate
psbE gene − 64005 64256 252 Locate
petL gene + 65188 65283 96 Locate
petG gene + 65457 65570 114 Locate
trnW-CCA gene − 65696 65769 74 Locate
trnP-UGG gene − 65939 66012 74 Locate
psaJ gene + 66288 66422 135 Locate
rpl33 gene + 66896 67096 201 Locate
rps18 gene + 67244 67549 306 Locate
rpl20 gene − 67766 68152 387 Locate
rps12 gene − 68921 69034 114 Locate
clpP gene − 69161 71044 1884 Locate
psbB gene + 71482 73008 1527 Locate
psbT gene + 73194 73301 108 Locate
psbN gene − 73362 73493 132 Locate
psbH gene + 73597 73818 222 Locate
petB gene + 73943 75324 1382 Locate
petD gene + 75527 76748 1222 Locate
rpoA gene − 76926 77939 1014 Locate
rps11 gene − 78011 78442 432 Locate
rpl36 gene − 78530 78643 114 Locate
infA gene − 78739 78972 234 Locate
rps8 gene − 79095 79508 414 Locate
rpl14 gene − 79700 80068 369 Locate
rpl16 gene − 80195 81497 1303 Locate
rps3 gene − 81644 82306 663 Locate
rpl22 gene − 82291 82755 465 Locate
rps19 gene − 82815 83087 273 Locate
rpl2 gene − 83146 84637 1492 Locate
rpl23 gene − 84656 84937 282 Locate
trnI-CAU gene − 85103 85176 74 Locate
ycf2 gene + 85265 92131 6867 Locate
ycf15 gene + 92225 92422 198 Locate
trnL-CAA gene − 92683 92763 81 Locate
ndhB gene − 93303 95514 2212 Locate
rps7 gene − 95789 96256 468 Locate
rps12 gene − 96310 97103 794 Locate
trnV-GAC gene + 98720 98791 72 Locate
rrn16 gene + 99019 100509 1491 Locate
trnI-GAU gene + 100799 101807 1009 Locate
trnA-UGC gene + 101872 102750 879 Locate
rrn23 gene + 102942 105750 2809 Locate
rrn4.5 gene + 105851 105953 103 Locate
rrn5 gene + 106209 106329 121 Locate
trnR-ACG gene + 106564 106637 74 Locate
trnN-GUU gene − 107204 107275 72 Locate
ndhF gene − 108665 110887 2223 Locate
rpl32 gene + 111393 111569 177 Locate
trnL-UAG gene + 112292 112371 80 Locate
ccsA gene + 112456 113427 972 Locate
ndhD gene − 113608 115110 1503 Locate
psaC gene − 115227 115472 246 Locate
ndhE gene − 115735 116037 303 Locate
ndhG gene − 116262 116792 531 Locate
ndhI gene − 117165 117671 507 Locate
ndhA gene − 117758 119923 2166 Locate
ndhH gene − 119925 121106 1182 Locate
rps15 gene − 121207 121542 336 Locate
ycf1 gene − 121860 127406 5547 Locate
trnN-GUU gene + 127732 127803 72 Locate
trnR-ACG gene − 128370 128443 74 Locate
rrn5 gene − 128678 128798 121 Locate
rrn4.5 gene − 129054 129156 103 Locate
rrn23 gene − 129257 132065 2809 Locate
trnA-UGC gene − 132257 133135 879 Locate
trnI-GAU gene − 133200 134208 1009 Locate
rrn16 gene − 134498 135988 1491 Locate
trnV-GAC gene − 136216 136287 72 Locate
rps12 gene + 137904 138697 794 Locate
rps7 gene + 138751 139218 468 Locate
ndhB gene + 139493 141704 2212 Locate
trnL-CAA gene + 142244 142324 81 Locate
ycf15 gene − 142585 142782 198 Locate
ycf2 gene − 142876 149742 6867 Locate
trnI-CAU gene + 149831 149904 74 Locate
rpl23 gene + 150070 150351 282 Locate
rpl2 gene + 150370 151861 1492 Locate
Status Available
Accession PP056237.1
Length 151,955 bp
GC content 38.4%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources