Matsumurella szechuanensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · OR565952.1 · 2–76 bp · −
psbA · OR565952.1 · 316–1,374 bp · −
trnK-UUU · OR565952.1 · 1,607–4,214 bp · −
matK · OR565952.1 · 1,930–3,465 bp · −
rps16 · OR565952.1 · 5,160–6,300 bp · −
trnQ-UUG · OR565952.1 · 7,260–7,331 bp · −
trnS-GCU · OR565952.1 · 8,463–8,550 bp · −
atpA · OR565952.1 · 10,345–11,868 bp · −
atpF · OR565952.1 · 11,956–13,173 bp · −
atpH · OR565952.1 · 13,513–13,758 bp · −
atpI · OR565952.1 · 14,751–15,494 bp · −
rps2 · OR565952.1 · 15,725–16,435 bp · −
rpoC2 · OR565952.1 · 16,735–20,844 bp · −
rpoC1 · OR565952.1 · 20,999–23,830 bp · −
rpoB · OR565952.1 · 23,857–27,069 bp · −
psbM · OR565952.1 · 29,960–30,064 bp · −
trnD-GUC · OR565952.1 · 30,587–30,660 bp · −
trnY-GUA · OR565952.1 · 30,776–30,859 bp · −
trnE-UUC · OR565952.1 · 30,919–30,991 bp · −
trnS-UGA · OR565952.1 · 35,494–35,586 bp · −
trnfM-CAU · OR565952.1 · 36,549–36,622 bp · −
rps14 · OR565952.1 · 36,778–37,080 bp · −
psaB · OR565952.1 · 37,208–39,412 bp · −
psaA · OR565952.1 · 39,438–41,690 bp · −
ycf3 · OR565952.1 · 42,423–44,377 bp · −
rps4 · OR565952.1 · 45,085–45,690 bp · −
trnT-UGU · OR565952.1 · 46,089–46,161 bp · −
ndhJ · OR565952.1 · 48,437–48,913 bp · −
ndhK · OR565952.1 · 49,014–49,691 bp · −
ndhC · OR565952.1 · 49,745–50,107 bp · −
trnV-UAC · OR565952.1 · 51,073–51,725 bp · −
atpE · OR565952.1 · 52,202–52,603 bp · −
atpB · OR565952.1 · 52,600–54,096 bp · −
psbJ · OR565952.1 · 63,768–63,890 bp · −
psbL · OR565952.1 · 64,028–64,144 bp · −
psbF · OR565952.1 · 64,168–64,287 bp · −
psbE · OR565952.1 · 64,302–64,553 bp · −
trnW-CCA · OR565952.1 · 65,991–66,064 bp · −
trnP-UGG · OR565952.1 · 66,233–66,306 bp · −
rpl20 · OR565952.1 · 68,050–68,436 bp · −
rps12 · OR565952.1 · 69,203–69,316 bp · −
rps12 · OR565952.1 · 96,572–97,365 bp · −
clpP · OR565952.1 · 69,443–71,307 bp · −
psbN · OR565952.1 · 73,633–73,764 bp · −
rpoA · OR565952.1 · 77,172–78,185 bp · −
rps11 · OR565952.1 · 78,264–78,695 bp · −
rpl36 · OR565952.1 · 78,783–78,896 bp · −
infA · OR565952.1 · 78,992–79,225 bp · −
rps8 · OR565952.1 · 79,346–79,759 bp · −
rpl14 · OR565952.1 · 79,952–80,320 bp · −
rpl16 · OR565952.1 · 80,453–81,759 bp · −
rps3 · OR565952.1 · 81,906–82,568 bp · −
rpl22 · OR565952.1 · 82,553–83,017 bp · −
rps19 · OR565952.1 · 83,077–83,355 bp · −
rpl2 · OR565952.1 · 83,408–84,899 bp · −
rpl23 · OR565952.1 · 84,918–85,199 bp · −
trnI-CAU · OR565952.1 · 85,365–85,438 bp · −
trnL-CAA · OR565952.1 · 92,945–93,025 bp · −
ndhB · OR565952.1 · 93,565–95,776 bp · −
rps7 · OR565952.1 · 96,051–96,518 bp · −
trnN-GUU · OR565952.1 · 107,466–107,537 bp · −
ndhF · OR565952.1 · 108,927–111,149 bp · −
ndhD · OR565952.1 · 113,879–115,399 bp · −
psaC · OR565952.1 · 115,498–115,743 bp · −
ndhE · OR565952.1 · 116,006–116,311 bp · −
ndhG · OR565952.1 · 116,533–117,063 bp · −
ndhI · OR565952.1 · 117,435–117,941 bp · −
ndhA · OR565952.1 · 118,028–120,193 bp · −
ndhH · OR565952.1 · 120,195–121,376 bp · −
rps15 · OR565952.1 · 121,477–121,749 bp · −
ycf1 · OR565952.1 · 122,130–127,682 bp · −
trnR-ACG · OR565952.1 · 128,647–128,719 bp · −
rrn5 · OR565952.1 · 128,954–129,074 bp · −
rrn4.5 · OR565952.1 · 129,330–129,432 bp · −
rrn23 · OR565952.1 · 129,531–132,340 bp · −
trnA-UGC · OR565952.1 · 132,533–133,411 bp · −
trnI-GAU · OR565952.1 · 133,476–134,484 bp · −
rrn16 · OR565952.1 · 134,774–136,264 bp · −
trnV-GAC · OR565952.1 · 136,492–136,563 bp · −
ycf15 · OR565952.1 · 142,861–143,124 bp · −
ycf2 · OR565952.1 · 143,152–150,018 bp · −
psbK · OR565952.1 · 7,668–7,853 bp · +
psbI · OR565952.1 · 8,229–8,339 bp · +
trnG-UCC · OR565952.1 · 9,241–10,000 bp · +
trnR-UCU · OR565952.1 · 10,177–10,248 bp · +
trnC-GCA · OR565952.1 · 28,177–28,252 bp · +
petN · OR565952.1 · 29,083–29,178 bp · +
trnT-GGU · OR565952.1 · 31,511–31,581 bp · +
psbD · OR565952.1 · 32,833–33,894 bp · +
psbC · OR565952.1 · 33,842–35,263 bp · +
psbZ · OR565952.1 · 35,912–36,100 bp · +
trnG-GCC · OR565952.1 · 36,330–36,400 bp · +
trnS-GGA · OR565952.1 · 44,701–44,787 bp · +
trnL-UAA · OR565952.1 · 46,837–47,410 bp · +
trnF-GAA · OR565952.1 · 47,702–47,774 bp · +
trnM-CAU · OR565952.1 · 51,915–51,986 bp · +
rbcL · OR565952.1 · 54,899–56,344 bp · +
accD · OR565952.1 · 57,034–58,500 bp · +
psaI · OR565952.1 · 59,188–59,298 bp · +
ycf4 · OR565952.1 · 59,740–60,294 bp · +
cemA · OR565952.1 · 60,855–61,544 bp · +
petA · OR565952.1 · 61,761–62,723 bp · +
petL · OR565952.1 · 65,483–65,578 bp · +
petG · OR565952.1 · 65,752–65,865 bp · +
psaJ · OR565952.1 · 66,581–66,715 bp · +
rpl33 · OR565952.1 · 67,181–67,381 bp · +
rps18 · OR565952.1 · 67,528–67,833 bp · +
rps12 · OR565952.1 · 138,180–138,973 bp · +
psbB · OR565952.1 · 71,745–73,271 bp · +
psbT · OR565952.1 · 73,465–73,572 bp · +
psbH · OR565952.1 · 73,868–74,089 bp · +
petB · OR565952.1 · 74,214–75,593 bp · +
petD · OR565952.1 · 75,788–77,009 bp · +
ycf2 · OR565952.1 · 85,527–92,393 bp · +
ycf15 · OR565952.1 · 92,436–92,684 bp · +
trnV-GAC · OR565952.1 · 98,982–99,053 bp · +
rrn16 · OR565952.1 · 99,281–100,771 bp · +
trnI-GAU · OR565952.1 · 101,061–102,069 bp · +
trnA-UGC · OR565952.1 · 102,134–103,012 bp · +
rrn23 · OR565952.1 · 103,205–106,014 bp · +
rrn4.5 · OR565952.1 · 106,113–106,215 bp · +
rrn5 · OR565952.1 · 106,471–106,591 bp · +
trnR-ACG · OR565952.1 · 106,826–106,898 bp · +
rpl32 · OR565952.1 · 111,655–111,831 bp · +
trnL-UAG · OR565952.1 · 112,555–112,634 bp · +
ccsA · OR565952.1 · 112,719–113,690 bp · +
trnN-GUU · OR565952.1 · 128,008–128,079 bp · +
rps7 · OR565952.1 · 139,027–139,494 bp · +
ndhB · OR565952.1 · 139,769–141,980 bp · +
trnL-CAA · OR565952.1 · 142,520–142,600 bp · +
trnI-CAU · OR565952.1 · 150,107–150,180 bp · +
rpl23 · OR565952.1 · 150,346–150,627 bp · +
rpl2 · OR565952.1 · 150,646–152,137 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Matsumurella szechuanensis
ANNOTATED PLASTOME
OR565952.1
152,231 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38058 76116 114173 152231 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 316 1374 1059 Locate
trnK-UUU gene − 1607 4214 2608 Locate
matK gene − 1930 3465 1536 Locate
rps16 gene − 5160 6300 1141 Locate
trnQ-UUG gene − 7260 7331 72 Locate
psbK gene + 7668 7853 186 Locate
psbI gene + 8229 8339 111 Locate
trnS-GCU gene − 8463 8550 88 Locate
trnG-UCC gene + 9241 10000 760 Locate
trnR-UCU gene + 10177 10248 72 Locate
atpA gene − 10345 11868 1524 Locate
atpF gene − 11956 13173 1218 Locate
atpH gene − 13513 13758 246 Locate
atpI gene − 14751 15494 744 Locate
rps2 gene − 15725 16435 711 Locate
rpoC2 gene − 16735 20844 4110 Locate
rpoC1 gene − 20999 23830 2832 Locate
rpoB gene − 23857 27069 3213 Locate
trnC-GCA gene + 28177 28252 76 Locate
petN gene + 29083 29178 96 Locate
psbM gene − 29960 30064 105 Locate
trnD-GUC gene − 30587 30660 74 Locate
trnY-GUA gene − 30776 30859 84 Locate
trnE-UUC gene − 30919 30991 73 Locate
trnT-GGU gene + 31511 31581 71 Locate
psbD gene + 32833 33894 1062 Locate
psbC gene + 33842 35263 1422 Locate
trnS-UGA gene − 35494 35586 93 Locate
psbZ gene + 35912 36100 189 Locate
trnG-GCC gene + 36330 36400 71 Locate
trnfM-CAU gene − 36549 36622 74 Locate
rps14 gene − 36778 37080 303 Locate
psaB gene − 37208 39412 2205 Locate
psaA gene − 39438 41690 2253 Locate
ycf3 gene − 42423 44377 1955 Locate
trnS-GGA gene + 44701 44787 87 Locate
rps4 gene − 45085 45690 606 Locate
trnT-UGU gene − 46089 46161 73 Locate
trnL-UAA gene + 46837 47410 574 Locate
trnF-GAA gene + 47702 47774 73 Locate
ndhJ gene − 48437 48913 477 Locate
ndhK gene − 49014 49691 678 Locate
ndhC gene − 49745 50107 363 Locate
trnV-UAC gene − 51073 51725 653 Locate
trnM-CAU gene + 51915 51986 72 Locate
atpE gene − 52202 52603 402 Locate
atpB gene − 52600 54096 1497 Locate
rbcL gene + 54899 56344 1446 Locate
accD gene + 57034 58500 1467 Locate
psaI gene + 59188 59298 111 Locate
ycf4 gene + 59740 60294 555 Locate
cemA gene + 60855 61544 690 Locate
petA gene + 61761 62723 963 Locate
psbJ gene − 63768 63890 123 Locate
psbL gene − 64028 64144 117 Locate
psbF gene − 64168 64287 120 Locate
psbE gene − 64302 64553 252 Locate
petL gene + 65483 65578 96 Locate
petG gene + 65752 65865 114 Locate
trnW-CCA gene − 65991 66064 74 Locate
trnP-UGG gene − 66233 66306 74 Locate
psaJ gene + 66581 66715 135 Locate
rpl33 gene + 67181 67381 201 Locate
rps18 gene + 67528 67833 306 Locate
rpl20 gene − 68050 68436 387 Locate
rps12 gene − 69203 69316 114 Locate
clpP gene − 69443 71307 1865 Locate
psbB gene + 71745 73271 1527 Locate
psbT gene + 73465 73572 108 Locate
psbN gene − 73633 73764 132 Locate
psbH gene + 73868 74089 222 Locate
petB gene + 74214 75593 1380 Locate
petD gene + 75788 77009 1222 Locate
rpoA gene − 77172 78185 1014 Locate
rps11 gene − 78264 78695 432 Locate
rpl36 gene − 78783 78896 114 Locate
infA gene − 78992 79225 234 Locate
rps8 gene − 79346 79759 414 Locate
rpl14 gene − 79952 80320 369 Locate
rpl16 gene − 80453 81759 1307 Locate
rps3 gene − 81906 82568 663 Locate
rpl22 gene − 82553 83017 465 Locate
rps19 gene − 83077 83355 279 Locate
rpl2 gene − 83408 84899 1492 Locate
rpl23 gene − 84918 85199 282 Locate
trnI-CAU gene − 85365 85438 74 Locate
ycf2 gene + 85527 92393 6867 Locate
ycf15 gene + 92436 92684 249 Locate
trnL-CAA gene − 92945 93025 81 Locate
ndhB gene − 93565 95776 2212 Locate
rps7 gene − 96051 96518 468 Locate
rps12 gene − 96572 97365 794 Locate
trnV-GAC gene + 98982 99053 72 Locate
rrn16 gene + 99281 100771 1491 Locate
trnI-GAU gene + 101061 102069 1009 Locate
trnA-UGC gene + 102134 103012 879 Locate
rrn23 gene + 103205 106014 2810 Locate
rrn4.5 gene + 106113 106215 103 Locate
rrn5 gene + 106471 106591 121 Locate
trnR-ACG gene + 106826 106898 73 Locate
trnN-GUU gene − 107466 107537 72 Locate
ndhF gene − 108927 111149 2223 Locate
rpl32 gene + 111655 111831 177 Locate
trnL-UAG gene + 112555 112634 80 Locate
ccsA gene + 112719 113690 972 Locate
ndhD gene − 113879 115399 1521 Locate
psaC gene − 115498 115743 246 Locate
ndhE gene − 116006 116311 306 Locate
ndhG gene − 116533 117063 531 Locate
ndhI gene − 117435 117941 507 Locate
ndhA gene − 118028 120193 2166 Locate
ndhH gene − 120195 121376 1182 Locate
rps15 gene − 121477 121749 273 Locate
ycf1 gene − 122130 127682 5553 Locate
trnN-GUU gene + 128008 128079 72 Locate
trnR-ACG gene − 128647 128719 73 Locate
rrn5 gene − 128954 129074 121 Locate
rrn4.5 gene − 129330 129432 103 Locate
rrn23 gene − 129531 132340 2810 Locate
trnA-UGC gene − 132533 133411 879 Locate
trnI-GAU gene − 133476 134484 1009 Locate
rrn16 gene − 134774 136264 1491 Locate
trnV-GAC gene − 136492 136563 72 Locate
rps12 gene + 138180 138973 794 Locate
rps7 gene + 139027 139494 468 Locate
ndhB gene + 139769 141980 2212 Locate
trnL-CAA gene + 142520 142600 81 Locate
ycf15 gene − 142861 143124 264 Locate
ycf2 gene − 143152 150018 6867 Locate
trnI-CAU gene + 150107 150180 74 Locate
rpl23 gene + 150346 150627 282 Locate
rpl2 gene + 150646 152137 1492 Locate
Status Available
Accession OR565952.1
Length 152,231 bp
GC content 38.4%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources