Matsumurella yangsoensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · OR565945.1 · 2–76 bp · −
psbA · OR565945.1 · 308–1,366 bp · −
trnK-UUU · OR565945.1 · 1,599–4,187 bp · −
matK · OR565945.1 · 1,903–3,438 bp · −
rps16 · OR565945.1 · 5,082–6,222 bp · −
trnQ-UUG · OR565945.1 · 7,171–7,242 bp · −
trnS-GCU · OR565945.1 · 8,375–8,462 bp · −
atpA · OR565945.1 · 10,260–11,783 bp · −
atpF · OR565945.1 · 11,871–13,100 bp · −
atpH · OR565945.1 · 13,468–13,713 bp · −
atpI · OR565945.1 · 14,713–15,456 bp · −
rps2 · OR565945.1 · 15,687–16,397 bp · −
rpoC2 · OR565945.1 · 16,618–20,805 bp · −
rpoC1 · OR565945.1 · 20,960–23,791 bp · −
rpoB · OR565945.1 · 23,818–27,030 bp · −
psbM · OR565945.1 · 29,921–30,025 bp · −
trnD-GUC · OR565945.1 · 30,549–30,622 bp · −
trnY-GUA · OR565945.1 · 30,737–30,820 bp · −
trnE-UUC · OR565945.1 · 30,880–30,949 bp · −
trnS-UGA · OR565945.1 · 35,495–35,587 bp · −
trnfM-CAU · OR565945.1 · 36,542–36,615 bp · −
rps14 · OR565945.1 · 36,765–37,067 bp · −
psaB · OR565945.1 · 37,195–39,399 bp · −
psaA · OR565945.1 · 39,425–41,677 bp · −
ycf3 · OR565945.1 · 42,405–44,361 bp · −
rps4 · OR565945.1 · 45,076–45,681 bp · −
trnT-UGU · OR565945.1 · 46,072–46,144 bp · −
ndhJ · OR565945.1 · 47,974–48,468 bp · −
ndhK · OR565945.1 · 48,551–49,228 bp · −
ndhC · OR565945.1 · 49,282–49,644 bp · −
trnV-UAC · OR565945.1 · 50,579–51,225 bp · −
atpE · OR565945.1 · 51,699–52,100 bp · −
atpB · OR565945.1 · 52,097–53,587 bp · −
psbJ · OR565945.1 · 63,277–63,399 bp · −
psbL · OR565945.1 · 63,537–63,653 bp · −
psbF · OR565945.1 · 63,677–63,796 bp · −
psbE · OR565945.1 · 63,811–64,062 bp · −
trnW-CCA · OR565945.1 · 65,499–65,572 bp · −
trnP-UGG · OR565945.1 · 65,742–65,815 bp · −
rpl20 · OR565945.1 · 67,529–67,915 bp · −
rps12 · OR565945.1 · 68,682–68,795 bp · −
rps12 · OR565945.1 · 96,037–96,830 bp · −
clpP · OR565945.1 · 68,922–70,788 bp · −
psbN · OR565945.1 · 73,114–73,245 bp · −
rpoA · OR565945.1 · 76,654–77,667 bp · −
rps11 · OR565945.1 · 77,739–78,170 bp · −
rpl36 · OR565945.1 · 78,258–78,371 bp · −
infA · OR565945.1 · 78,467–78,700 bp · −
rps8 · OR565945.1 · 78,819–79,232 bp · −
rpl14 · OR565945.1 · 79,423–79,791 bp · −
rpl16 · OR565945.1 · 79,918–81,224 bp · −
rps3 · OR565945.1 · 81,371–82,033 bp · −
rpl22 · OR565945.1 · 82,018–82,482 bp · −
rps19 · OR565945.1 · 82,542–82,820 bp · −
rpl2 · OR565945.1 · 82,873–84,364 bp · −
rpl23 · OR565945.1 · 84,383–84,664 bp · −
trnI-CAU · OR565945.1 · 84,830–84,903 bp · −
trnL-CAA · OR565945.1 · 92,410–92,490 bp · −
ndhB · OR565945.1 · 93,030–95,241 bp · −
rps7 · OR565945.1 · 95,516–95,983 bp · −
trnN-GUU · OR565945.1 · 106,931–107,002 bp · −
ndhF · OR565945.1 · 108,392–110,614 bp · −
ndhD · OR565945.1 · 113,338–114,858 bp · −
psaC · OR565945.1 · 114,956–115,201 bp · −
ndhE · OR565945.1 · 115,464–115,769 bp · −
ndhG · OR565945.1 · 115,991–116,521 bp · −
ndhI · OR565945.1 · 116,900–117,397 bp · −
ndhA · OR565945.1 · 117,484–119,643 bp · −
ndhH · OR565945.1 · 119,645–120,826 bp · −
rps15 · OR565945.1 · 120,927–121,262 bp · −
ycf1 · OR565945.1 · 121,580–127,132 bp · −
trnR-ACG · OR565945.1 · 128,097–128,169 bp · −
rrn5 · OR565945.1 · 128,404–128,524 bp · −
rrn4.5 · OR565945.1 · 128,780–128,882 bp · −
rrn23 · OR565945.1 · 128,981–131,790 bp · −
trnA-UGC · OR565945.1 · 131,983–132,861 bp · −
trnI-GAU · OR565945.1 · 132,926–133,934 bp · −
rrn16 · OR565945.1 · 134,224–135,714 bp · −
trnV-GAC · OR565945.1 · 135,942–136,013 bp · −
ycf15 · OR565945.1 · 142,311–142,574 bp · −
ycf2 · OR565945.1 · 142,602–149,468 bp · −
psbK · OR565945.1 · 7,579–7,764 bp · +
psbI · OR565945.1 · 8,141–8,251 bp · +
trnG-UCC · OR565945.1 · 9,156–9,915 bp · +
trnR-UCU · OR565945.1 · 10,092–10,163 bp · +
trnC-GCA · OR565945.1 · 28,132–28,212 bp · +
petN · OR565945.1 · 29,038–29,133 bp · +
trnT-GGU · OR565945.1 · 31,512–31,582 bp · +
psbD · OR565945.1 · 32,834–33,895 bp · +
psbC · OR565945.1 · 33,843–35,264 bp · +
psbZ · OR565945.1 · 35,904–36,092 bp · +
trnG-GCC · OR565945.1 · 36,322–36,392 bp · +
trnS-GGA · OR565945.1 · 44,691–44,777 bp · +
trnL-UAA · OR565945.1 · 46,823–47,396 bp · +
trnF-GAA · OR565945.1 · 47,688–47,760 bp · +
trnM-CAU · OR565945.1 · 51,415–51,486 bp · +
rbcL · OR565945.1 · 54,397–55,851 bp · +
accD · OR565945.1 · 56,541–58,007 bp · +
psaI · OR565945.1 · 58,694–58,804 bp · +
ycf4 · OR565945.1 · 59,240–59,794 bp · +
cemA · OR565945.1 · 60,362–61,051 bp · +
petA · OR565945.1 · 61,268–62,230 bp · +
petL · OR565945.1 · 64,990–65,085 bp · +
petG · OR565945.1 · 65,260–65,373 bp · +
psaJ · OR565945.1 · 66,090–66,224 bp · +
rpl33 · OR565945.1 · 66,697–66,897 bp · +
rps18 · OR565945.1 · 67,044–67,349 bp · +
rps12 · OR565945.1 · 137,630–138,423 bp · +
psbB · OR565945.1 · 71,226–72,752 bp · +
psbT · OR565945.1 · 72,946–73,053 bp · +
psbH · OR565945.1 · 73,349–73,570 bp · +
petB · OR565945.1 · 73,695–75,075 bp · +
petD · OR565945.1 · 75,270–76,491 bp · +
ycf2 · OR565945.1 · 84,992–91,858 bp · +
ycf15 · OR565945.1 · 91,901–92,149 bp · +
trnV-GAC · OR565945.1 · 98,447–98,518 bp · +
rrn16 · OR565945.1 · 98,746–100,236 bp · +
trnI-GAU · OR565945.1 · 100,526–101,534 bp · +
trnA-UGC · OR565945.1 · 101,599–102,477 bp · +
rrn23 · OR565945.1 · 102,670–105,479 bp · +
rrn4.5 · OR565945.1 · 105,578–105,680 bp · +
rrn5 · OR565945.1 · 105,936–106,056 bp · +
trnR-ACG · OR565945.1 · 106,291–106,363 bp · +
rpl32 · OR565945.1 · 111,120–111,296 bp · +
trnL-UAG · OR565945.1 · 112,020–112,099 bp · +
ccsA · OR565945.1 · 112,184–113,155 bp · +
trnN-GUU · OR565945.1 · 127,458–127,529 bp · +
rps7 · OR565945.1 · 138,477–138,944 bp · +
ndhB · OR565945.1 · 139,219–141,430 bp · +
trnL-CAA · OR565945.1 · 141,970–142,050 bp · +
trnI-CAU · OR565945.1 · 149,557–149,630 bp · +
rpl23 · OR565945.1 · 149,796–150,077 bp · +
rpl2 · OR565945.1 · 150,096–151,587 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Matsumurella yangsoensis
ANNOTATED PLASTOME
OR565945.1
151,681 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37920 75840 113761 151681 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 308 1366 1059 Locate
trnK-UUU gene − 1599 4187 2589 Locate
matK gene − 1903 3438 1536 Locate
rps16 gene − 5082 6222 1141 Locate
trnQ-UUG gene − 7171 7242 72 Locate
psbK gene + 7579 7764 186 Locate
psbI gene + 8141 8251 111 Locate
trnS-GCU gene − 8375 8462 88 Locate
trnG-UCC gene + 9156 9915 760 Locate
trnR-UCU gene + 10092 10163 72 Locate
atpA gene − 10260 11783 1524 Locate
atpF gene − 11871 13100 1230 Locate
atpH gene − 13468 13713 246 Locate
atpI gene − 14713 15456 744 Locate
rps2 gene − 15687 16397 711 Locate
rpoC2 gene − 16618 20805 4188 Locate
rpoC1 gene − 20960 23791 2832 Locate
rpoB gene − 23818 27030 3213 Locate
trnC-GCA gene + 28132 28212 81 Locate
petN gene + 29038 29133 96 Locate
psbM gene − 29921 30025 105 Locate
trnD-GUC gene − 30549 30622 74 Locate
trnY-GUA gene − 30737 30820 84 Locate
trnE-UUC gene − 30880 30949 70 Locate
trnT-GGU gene + 31512 31582 71 Locate
psbD gene + 32834 33895 1062 Locate
psbC gene + 33843 35264 1422 Locate
trnS-UGA gene − 35495 35587 93 Locate
psbZ gene + 35904 36092 189 Locate
trnG-GCC gene + 36322 36392 71 Locate
trnfM-CAU gene − 36542 36615 74 Locate
rps14 gene − 36765 37067 303 Locate
psaB gene − 37195 39399 2205 Locate
psaA gene − 39425 41677 2253 Locate
ycf3 gene − 42405 44361 1957 Locate
trnS-GGA gene + 44691 44777 87 Locate
rps4 gene − 45076 45681 606 Locate
trnT-UGU gene − 46072 46144 73 Locate
trnL-UAA gene + 46823 47396 574 Locate
trnF-GAA gene + 47688 47760 73 Locate
ndhJ gene − 47974 48468 495 Locate
ndhK gene − 48551 49228 678 Locate
ndhC gene − 49282 49644 363 Locate
trnV-UAC gene − 50579 51225 647 Locate
trnM-CAU gene + 51415 51486 72 Locate
atpE gene − 51699 52100 402 Locate
atpB gene − 52097 53587 1491 Locate
rbcL gene + 54397 55851 1455 Locate
accD gene + 56541 58007 1467 Locate
psaI gene + 58694 58804 111 Locate
ycf4 gene + 59240 59794 555 Locate
cemA gene + 60362 61051 690 Locate
petA gene + 61268 62230 963 Locate
psbJ gene − 63277 63399 123 Locate
psbL gene − 63537 63653 117 Locate
psbF gene − 63677 63796 120 Locate
psbE gene − 63811 64062 252 Locate
petL gene + 64990 65085 96 Locate
petG gene + 65260 65373 114 Locate
trnW-CCA gene − 65499 65572 74 Locate
trnP-UGG gene − 65742 65815 74 Locate
psaJ gene + 66090 66224 135 Locate
rpl33 gene + 66697 66897 201 Locate
rps18 gene + 67044 67349 306 Locate
rpl20 gene − 67529 67915 387 Locate
rps12 gene − 68682 68795 114 Locate
clpP gene − 68922 70788 1867 Locate
psbB gene + 71226 72752 1527 Locate
psbT gene + 72946 73053 108 Locate
psbN gene − 73114 73245 132 Locate
psbH gene + 73349 73570 222 Locate
petB gene + 73695 75075 1381 Locate
petD gene + 75270 76491 1222 Locate
rpoA gene − 76654 77667 1014 Locate
rps11 gene − 77739 78170 432 Locate
rpl36 gene − 78258 78371 114 Locate
infA gene − 78467 78700 234 Locate
rps8 gene − 78819 79232 414 Locate
rpl14 gene − 79423 79791 369 Locate
rpl16 gene − 79918 81224 1307 Locate
rps3 gene − 81371 82033 663 Locate
rpl22 gene − 82018 82482 465 Locate
rps19 gene − 82542 82820 279 Locate
rpl2 gene − 82873 84364 1492 Locate
rpl23 gene − 84383 84664 282 Locate
trnI-CAU gene − 84830 84903 74 Locate
ycf2 gene + 84992 91858 6867 Locate
ycf15 gene + 91901 92149 249 Locate
trnL-CAA gene − 92410 92490 81 Locate
ndhB gene − 93030 95241 2212 Locate
rps7 gene − 95516 95983 468 Locate
rps12 gene − 96037 96830 794 Locate
trnV-GAC gene + 98447 98518 72 Locate
rrn16 gene + 98746 100236 1491 Locate
trnI-GAU gene + 100526 101534 1009 Locate
trnA-UGC gene + 101599 102477 879 Locate
rrn23 gene + 102670 105479 2810 Locate
rrn4.5 gene + 105578 105680 103 Locate
rrn5 gene + 105936 106056 121 Locate
trnR-ACG gene + 106291 106363 73 Locate
trnN-GUU gene − 106931 107002 72 Locate
ndhF gene − 108392 110614 2223 Locate
rpl32 gene + 111120 111296 177 Locate
trnL-UAG gene + 112020 112099 80 Locate
ccsA gene + 112184 113155 972 Locate
ndhD gene − 113338 114858 1521 Locate
psaC gene − 114956 115201 246 Locate
ndhE gene − 115464 115769 306 Locate
ndhG gene − 115991 116521 531 Locate
ndhI gene − 116900 117397 498 Locate
ndhA gene − 117484 119643 2160 Locate
ndhH gene − 119645 120826 1182 Locate
rps15 gene − 120927 121262 336 Locate
ycf1 gene − 121580 127132 5553 Locate
trnN-GUU gene + 127458 127529 72 Locate
trnR-ACG gene − 128097 128169 73 Locate
rrn5 gene − 128404 128524 121 Locate
rrn4.5 gene − 128780 128882 103 Locate
rrn23 gene − 128981 131790 2810 Locate
trnA-UGC gene − 131983 132861 879 Locate
trnI-GAU gene − 132926 133934 1009 Locate
rrn16 gene − 134224 135714 1491 Locate
trnV-GAC gene − 135942 136013 72 Locate
rps12 gene + 137630 138423 794 Locate
rps7 gene + 138477 138944 468 Locate
ndhB gene + 139219 141430 2212 Locate
trnL-CAA gene + 141970 142050 81 Locate
ycf15 gene − 142311 142574 264 Locate
ycf2 gene − 142602 149468 6867 Locate
trnI-CAU gene + 149557 149630 74 Locate
rpl23 gene + 149796 150077 282 Locate
rpl2 gene + 150096 151587 1492 Locate
Status Available
Accession OR565945.1
Length 151,681 bp
GC content 38.4%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources