Coordinate-aware organelle record

Matsumurella yangsoensis chloroplast genome

Available OR565945.1 151,681 bp 132 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 2-76 bp · − strandpsbA · gene · 308-1,366 bp · − strandtrnK-UUU · gene · 1,599-4,187 bp · − strandmatK · gene · 1,903-3,438 bp · − strandrps16 · gene · 5,082-6,222 bp · − strandtrnQ-UUG · gene · 7,171-7,242 bp · − strandpsbK · gene · 7,579-7,764 bp · + strandpsbI · gene · 8,141-8,251 bp · + strandtrnS-GCU · gene · 8,375-8,462 bp · − strandtrnG-UCC · gene · 9,156-9,915 bp · + strandtrnR-UCU · gene · 10,092-10,163 bp · + strandatpA · gene · 10,260-11,783 bp · − strandatpF · gene · 11,871-13,100 bp · − strandatpH · gene · 13,468-13,713 bp · − strandatpI · gene · 14,713-15,456 bp · − strandrps2 · gene · 15,687-16,397 bp · − strandrpoC2 · gene · 16,618-20,805 bp · − strandrpoC1 · gene · 20,960-23,791 bp · − strandrpoB · gene · 23,818-27,030 bp · − strandtrnC-GCA · gene · 28,132-28,212 bp · + strandpetN · gene · 29,038-29,133 bp · + strandpsbM · gene · 29,921-30,025 bp · − strandtrnD-GUC · gene · 30,549-30,622 bp · − strandtrnY-GUA · gene · 30,737-30,820 bp · − strandtrnE-UUC · gene · 30,880-30,949 bp · − strandtrnT-GGU · gene · 31,512-31,582 bp · + strandpsbD · gene · 32,834-33,895 bp · + strandpsbC · gene · 33,843-35,264 bp · + strandtrnS-UGA · gene · 35,495-35,587 bp · − strandpsbZ · gene · 35,904-36,092 bp · + strandtrnG-GCC · gene · 36,322-36,392 bp · + strandtrnfM-CAU · gene · 36,542-36,615 bp · − strandrps14 · gene · 36,765-37,067 bp · − strandpsaB · gene · 37,195-39,399 bp · − strandpsaA · gene · 39,425-41,677 bp · − strandycf3 · gene · 42,405-44,361 bp · − strandtrnS-GGA · gene · 44,691-44,777 bp · + strandrps4 · gene · 45,076-45,681 bp · − strandtrnT-UGU · gene · 46,072-46,144 bp · − strandtrnL-UAA · gene · 46,823-47,396 bp · + strandtrnF-GAA · gene · 47,688-47,760 bp · + strandndhJ · gene · 47,974-48,468 bp · − strandndhK · gene · 48,551-49,228 bp · − strandndhC · gene · 49,282-49,644 bp · − strandtrnV-UAC · gene · 50,579-51,225 bp · − strandtrnM-CAU · gene · 51,415-51,486 bp · + strandatpE · gene · 51,699-52,100 bp · − strandatpB · gene · 52,097-53,587 bp · − strandrbcL · gene · 54,397-55,851 bp · + strandaccD · gene · 56,541-58,007 bp · + strandpsaI · gene · 58,694-58,804 bp · + strandycf4 · gene · 59,240-59,794 bp · + strandcemA · gene · 60,362-61,051 bp · + strandpetA · gene · 61,268-62,230 bp · + strandpsbJ · gene · 63,277-63,399 bp · − strandpsbL · gene · 63,537-63,653 bp · − strandpsbF · gene · 63,677-63,796 bp · − strandpsbE · gene · 63,811-64,062 bp · − strandpetL · gene · 64,990-65,085 bp · + strandpetG · gene · 65,260-65,373 bp · + strandtrnW-CCA · gene · 65,499-65,572 bp · − strandtrnP-UGG · gene · 65,742-65,815 bp · − strandpsaJ · gene · 66,090-66,224 bp · + strandrpl33 · gene · 66,697-66,897 bp · + strandrps18 · gene · 67,044-67,349 bp · + strandrpl20 · gene · 67,529-67,915 bp · − strandrps12 · gene · 68,682-96,830 bp · − strandrps12 · gene · 68,682-138,423 bp · + strandclpP · gene · 68,922-70,788 bp · − strandpsbB · gene · 71,226-72,752 bp · + strandpsbT · gene · 72,946-73,053 bp · + strandpsbN · gene · 73,114-73,245 bp · − strandpsbH · gene · 73,349-73,570 bp · + strandpetB · gene · 73,695-75,075 bp · + strandpetD · gene · 75,270-76,491 bp · + strandrpoA · gene · 76,654-77,667 bp · − strandrps11 · gene · 77,739-78,170 bp · − strandrpl36 · gene · 78,258-78,371 bp · − strandinfA · gene · 78,467-78,700 bp · − strandrps8 · gene · 78,819-79,232 bp · − strandrpl14 · gene · 79,423-79,791 bp · − strandrpl16 · gene · 79,918-81,224 bp · − strandrps3 · gene · 81,371-82,033 bp · − strandrpl22 · gene · 82,018-82,482 bp · − strandrps19 · gene · 82,542-82,820 bp · − strandrpl2 · gene · 82,873-84,364 bp · − strandrpl23 · gene · 84,383-84,664 bp · − strandtrnI-CAU · gene · 84,830-84,903 bp · − strandycf2 · gene · 84,992-91,858 bp · + strandycf15 · gene · 91,901-92,149 bp · + strandtrnL-CAA · gene · 92,410-92,490 bp · − strandndhB · gene · 93,030-95,241 bp · − strandrps7 · gene · 95,516-95,983 bp · − strandtrnV-GAC · gene · 98,447-98,518 bp · + strandrrn16 · gene · 98,746-100,236 bp · + strandtrnI-GAU · gene · 100,526-101,534 bp · + strandtrnA-UGC · gene · 101,599-102,477 bp · + strandrrn23 · gene · 102,670-105,479 bp · + strandrrn4.5 · gene · 105,578-105,680 bp · + strandrrn5 · gene · 105,936-106,056 bp · + strandtrnR-ACG · gene · 106,291-106,363 bp · + strandtrnN-GUU · gene · 106,931-107,002 bp · − strandndhF · gene · 108,392-110,614 bp · − strandrpl32 · gene · 111,120-111,296 bp · + strandtrnL-UAG · gene · 112,020-112,099 bp · + strandccsA · gene · 112,184-113,155 bp · + strandndhD · gene · 113,338-114,858 bp · − strandpsaC · gene · 114,956-115,201 bp · − strandndhE · gene · 115,464-115,769 bp · − strandndhG · gene · 115,991-116,521 bp · − strandndhI · gene · 116,900-117,397 bp · − strandndhA · gene · 117,484-119,643 bp · − strandndhH · gene · 119,645-120,826 bp · − strandrps15 · gene · 120,927-121,262 bp · − strandycf1 · gene · 121,580-127,132 bp · − strandtrnN-GUU · gene · 127,458-127,529 bp · + strandtrnR-ACG · gene · 128,097-128,169 bp · − strandrrn5 · gene · 128,404-128,524 bp · − strandrrn4.5 · gene · 128,780-128,882 bp · − strandrrn23 · gene · 128,981-131,790 bp · − strandtrnA-UGC · gene · 131,983-132,861 bp · − strandtrnI-GAU · gene · 132,926-133,934 bp · − strandrrn16 · gene · 134,224-135,714 bp · − strandtrnV-GAC · gene · 135,942-136,013 bp · − strandrps7 · gene · 138,477-138,944 bp · + strandndhB · gene · 139,219-141,430 bp · + strandtrnL-CAA · gene · 141,970-142,050 bp · + strandycf15 · gene · 142,311-142,574 bp · − strandycf2 · gene · 142,602-149,468 bp · − strandtrnI-CAU · gene · 149,557-149,630 bp · + strandrpl23 · gene · 149,796-150,077 bp · + strandrpl2 · gene · 150,096-151,587 bp · + strandMatsumurella yangsoensisANNOTATED PLASTOMEOR565945.1151,681 bp · 132 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: OR565945.1Features: 132 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−17675
psbAgenephotosystem-ii−30713661059
trnK-UUUgenetranslation-rna−159841872589
matKgeneother−190234381536
rps16generibosomal-protein−508162221141
trnQ-UUGgenetranslation-rna−7170724272
psbKgenephotosystem-ii+75787764186
psbIgenephotosystem-ii+81408251111
trnS-GCUgenetranslation-rna−8374846288
trnG-UCCgenetranslation-rna+91559915760
trnR-UCUgenetranslation-rna+100911016372
atpAgeneatp-synthase−10259117831524
atpFgeneatp-synthase−11870131001230
atpHgeneatp-synthase−1346713713246
atpIgeneatp-synthase−1471215456744
rps2generibosomal-protein−1568616397711
rpoC2generna-polymerase−16617208054188
rpoC1generna-polymerase−20959237912832
rpoBgenerna-polymerase−23817270303213
trnC-GCAgenetranslation-rna+281312821281
petNgenecytochrome+290372913396
psbMgenephotosystem-ii−2992030025105
trnD-GUCgenetranslation-rna−305483062274
trnY-GUAgenetranslation-rna−307363082084
trnE-UUCgenetranslation-rna−308793094970
trnT-GGUgenetranslation-rna+315113158271
psbDgenephotosystem-ii+32833338951062
psbCgenephotosystem-ii+33842352641422
trnS-UGAgenetranslation-rna−354943558793
psbZgenephotosystem-ii+3590336092189
trnG-GCCgenetranslation-rna+363213639271
trnfM-CAUgenetranslation-rna−365413661574
rps14generibosomal-protein−3676437067303
psaBgenephotosystem-i−37194393992205
psaAgenephotosystem-i−39424416772253
ycf3geneother−42404443611957
trnS-GGAgenetranslation-rna+446904477787
rps4generibosomal-protein−4507545681606
trnT-UGUgenetranslation-rna−460714614473
trnL-UAAgenetranslation-rna+4682247396574
trnF-GAAgenetranslation-rna+476874776073
ndhJgenenad-dehydrogenase−4797348468495
ndhKgenenad-dehydrogenase−4855049228678
ndhCgenenad-dehydrogenase−4928149644363
trnV-UACgenetranslation-rna−5057851225647
trnM-CAUgenetranslation-rna+514145148672
atpEgeneatp-synthase−5169852100402
atpBgeneatp-synthase−52096535871491
rbcLgeneother+54396558511455
accDgeneother+56540580071467
psaIgenephotosystem-i+5869358804111
ycf4geneother+5923959794555
cemAgeneother+6036161051690
petAgenecytochrome+6126762230963
psbJgenephotosystem-ii−6327663399123
psbLgenephotosystem-ii−6353663653117
psbFgenephotosystem-ii−6367663796120
psbEgenephotosystem-ii−6381064062252
petLgenecytochrome+649896508596
petGgenecytochrome+6525965373114
trnW-CCAgenetranslation-rna−654986557274
trnP-UGGgenetranslation-rna−657416581574
psaJgenephotosystem-i+6608966224135
rpl33generibosomal-protein+6669666897201
rps18generibosomal-protein+6704367349306
rpl20generibosomal-protein−6752867915387
rps12generibosomal-protein−686819683028149
rps12generibosomal-protein+6868113842369742
clpPgeneother−68921707881867
psbBgenephotosystem-ii+71225727521527
psbTgenephotosystem-ii+7294573053108
psbNgenephotosystem-ii−7311373245132
psbHgenephotosystem-ii+7334873570222
petBgenecytochrome+73694750751381
petDgenecytochrome+75269764911222
rpoAgenerna-polymerase−76653776671014
rps11generibosomal-protein−7773878170432
rpl36generibosomal-protein−7825778371114
infAgeneother−7846678700234
rps8generibosomal-protein−7881879232414
rpl14generibosomal-protein−7942279791369
rpl16generibosomal-protein−79917812241307
rps3generibosomal-protein−8137082033663
rpl22generibosomal-protein−8201782482465
rps19generibosomal-protein−8254182820279
rpl2generibosomal-protein−82872843641492
rpl23generibosomal-protein−8438284664282
trnI-CAUgenetranslation-rna−848298490374
ycf2geneother+84991918586867
ycf15geneother+9190092149249
trnL-CAAgenetranslation-rna−924099249081
ndhBgenenad-dehydrogenase−93029952412212
rps7generibosomal-protein−9551595983468
trnV-GACgenetranslation-rna+984469851872
rrn16generibosomal-rna+987451002361491
trnI-GAUgenetranslation-rna+1005251015341009
trnA-UGCgenetranslation-rna+101598102477879
rrn23generibosomal-rna+1026691054792810
rrn4.5generibosomal-rna+105577105680103
rrn5generibosomal-rna+105935106056121
trnR-ACGgenetranslation-rna+10629010636373
trnN-GUUgenetranslation-rna−10693010700272
ndhFgenenad-dehydrogenase−1083911106142223
rpl32generibosomal-protein+111119111296177
trnL-UAGgenetranslation-rna+11201911209980
ccsAgeneother+112183113155972
ndhDgenenad-dehydrogenase−1133371148581521
psaCgenephotosystem-i−114955115201246
ndhEgenenad-dehydrogenase−115463115769306
ndhGgenenad-dehydrogenase−115990116521531
ndhIgenenad-dehydrogenase−116899117397498
ndhAgenenad-dehydrogenase−1174831196432160
ndhHgenenad-dehydrogenase−1196441208261182
rps15generibosomal-protein−120926121262336
ycf1geneother−1215791271325553
trnN-GUUgenetranslation-rna+12745712752972
trnR-ACGgenetranslation-rna−12809612816973
rrn5generibosomal-rna−128403128524121
rrn4.5generibosomal-rna−128779128882103
rrn23generibosomal-rna−1289801317902810
trnA-UGCgenetranslation-rna−131982132861879
trnI-GAUgenetranslation-rna−1329251339341009
rrn16generibosomal-rna−1342231357141491
trnV-GACgenetranslation-rna−13594113601372
rps7generibosomal-protein+138476138944468
ndhBgenenad-dehydrogenase+1392181414302212
trnL-CAAgenetranslation-rna+14196914205081
ycf15geneother−142310142574264
ycf2geneother−1426011494686867
trnI-CAUgenetranslation-rna+14955614963074
rpl23generibosomal-protein+149795150077282
rpl2generibosomal-protein+1500951515871492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources