Mosla japonica chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PZ101799.1 · 7–80 bp · −
psbA · PZ101799.1 · 424–1,482 bp · −
trnK-UUU · PZ101799.1 · 1,709–4,298 bp · −
matK · PZ101799.1 · 2,023–3,567 bp · −
rps16 · PZ101799.1 · 4,829–5,963 bp · −
trnQ-UUG · PZ101799.1 · 7,001–7,072 bp · −
trnS-GCU · PZ101799.1 · 8,317–8,404 bp · −
atpA · PZ101799.1 · 10,216–11,739 bp · −
atpF · PZ101799.1 · 11,832–13,077 bp · −
atpH · PZ101799.1 · 13,356–13,601 bp · −
atpI · PZ101799.1 · 14,629–15,372 bp · −
rps2 · PZ101799.1 · 15,602–16,312 bp · −
rpoC2 · PZ101799.1 · 16,523–20,719 bp · −
rpoC1 · PZ101799.1 · 20,884–23,705 bp · −
rpoB · PZ101799.1 · 23,732–26,944 bp · −
psbM · PZ101799.1 · 29,478–29,582 bp · −
trnD-GUC · PZ101799.1 · 30,110–30,183 bp · −
trnY-GUA · PZ101799.1 · 30,294–30,377 bp · −
trnE-UUC · PZ101799.1 · 30,450–30,522 bp · −
trnS-UGA · PZ101799.1 · 35,161–35,242 bp · −
trnfM-CAU · PZ101799.1 · 36,300–36,373 bp · −
rps14 · PZ101799.1 · 36,523–36,825 bp · −
psaB · PZ101799.1 · 36,947–39,151 bp · −
psaA · PZ101799.1 · 39,177–41,429 bp · −
ycf3 · PZ101799.1 · 42,091–44,047 bp · −
rps4 · PZ101799.1 · 45,190–45,795 bp · −
trnT-UGU · PZ101799.1 · 46,269–46,341 bp · −
ndhJ · PZ101799.1 · 48,683–49,159 bp · −
ndhK · PZ101799.1 · 49,270–49,947 bp · −
ndhC · PZ101799.1 · 49,999–50,361 bp · −
trnV-UAC · PZ101799.1 · 51,356–51,998 bp · −
atpE · PZ101799.1 · 52,465–52,866 bp · −
atpB · PZ101799.1 · 52,863–54,359 bp · −
psbJ · PZ101799.1 · 64,215–64,337 bp · −
psbL · PZ101799.1 · 64,472–64,588 bp · −
psbF · PZ101799.1 · 64,612–64,731 bp · −
psbE · PZ101799.1 · 64,746–64,997 bp · −
trnW-CCA · PZ101799.1 · 66,365–66,438 bp · −
trnP-UGG · PZ101799.1 · 66,612–66,685 bp · −
rpl20 · PZ101799.1 · 68,476–68,862 bp · −
rps12 · PZ101799.1 · 69,676–69,801 bp · −
rps12 · PZ101799.1 · 97,098–97,888 bp · −
clpP · PZ101799.1 · 69,920–71,835 bp · −
psbN · PZ101799.1 · 74,154–74,285 bp · −
rpoA · PZ101799.1 · 77,666–78,673 bp · −
rps11 · PZ101799.1 · 78,744–79,160 bp · −
rpl36 · PZ101799.1 · 79,270–79,383 bp · −
infA · PZ101799.1 · 79,501–79,734 bp · −
rps8 · PZ101799.1 · 79,861–80,265 bp · −
rpl14 · PZ101799.1 · 80,438–80,806 bp · −
rpl16 · PZ101799.1 · 80,938–82,211 bp · −
rps3 · PZ101799.1 · 82,354–83,016 bp · −
rpl22 · PZ101799.1 · 83,001–83,468 bp · −
rps19 · PZ101799.1 · 83,533–83,811 bp · −
rpl2 · PZ101799.1 · 83,933–85,421 bp · −
rpl23 · PZ101799.1 · 85,445–85,726 bp · −
trnI-CAU · PZ101799.1 · 85,892–85,965 bp · −
trnL-CAA · PZ101799.1 · 93,459–93,539 bp · −
ndhB · PZ101799.1 · 94,114–96,258 bp · −
rps7 · PZ101799.1 · 96,577–97,044 bp · −
trnN-GUU · PZ101799.1 · 107,993–108,064 bp · −
ndhF · PZ101799.1 · 109,418–111,649 bp · −
ndhD · PZ101799.1 · 114,301–115,830 bp · −
psaC · PZ101799.1 · 115,929–116,174 bp · −
ndhE · PZ101799.1 · 116,424–116,729 bp · −
ndhG · PZ101799.1 · 116,952–117,482 bp · −
ndhI · PZ101799.1 · 117,851–118,342 bp · −
ndhA · PZ101799.1 · 118,423–120,558 bp · −
ndhH · PZ101799.1 · 120,560–121,771 bp · −
rps15 · PZ101799.1 · 121,841–122,113 bp · −
ycf1 · PZ101799.1 · 122,515–128,175 bp · −
trnR-ACG · PZ101799.1 · 129,026–129,099 bp · −
rrn5 · PZ101799.1 · 129,343–129,463 bp · −
rrn4.5 · PZ101799.1 · 129,724–129,826 bp · −
rrn23 · PZ101799.1 · 129,926–132,735 bp · −
trnA-UGC · PZ101799.1 · 132,913–133,803 bp · −
trnI-GAU · PZ101799.1 · 133,868–134,888 bp · −
rrn16 · PZ101799.1 · 135,187–136,677 bp · −
trnV-GAC · PZ101799.1 · 136,904–136,975 bp · −
ycf2 · PZ101799.1 · 143,601–150,404 bp · −
psbK · PZ101799.1 · 7,460–7,654 bp · +
psbI · PZ101799.1 · 8,022–8,132 bp · +
trnG-UCC · PZ101799.1 · 9,100–9,846 bp · +
trnR-UCU · PZ101799.1 · 10,040–10,111 bp · +
trnC-GCA · PZ101799.1 · 28,119–28,189 bp · +
petN · PZ101799.1 · 28,351–28,446 bp · +
trnT-GGU · PZ101799.1 · 31,101–31,172 bp · +
psbD · PZ101799.1 · 32,483–33,544 bp · +
psbC · PZ101799.1 · 33,492–34,913 bp · +
psbZ · PZ101799.1 · 35,590–35,778 bp · +
trnG-GCC · PZ101799.1 · 36,055–36,125 bp · +
trnS-GGA · PZ101799.1 · 44,884–44,970 bp · +
trnL-UAA · PZ101799.1 · 47,042–47,617 bp · +
trnF-GAA · PZ101799.1 · 47,925–47,997 bp · +
trnM-CAU · PZ101799.1 · 52,178–52,250 bp · +
rbcL · PZ101799.1 · 55,157–56,617 bp · +
accD · PZ101799.1 · 57,309–58,790 bp · +
psaI · PZ101799.1 · 59,513–59,623 bp · +
ycf4 · PZ101799.1 · 60,069–60,623 bp · +
cemA · PZ101799.1 · 61,278–61,967 bp · +
petA · PZ101799.1 · 62,195–63,157 bp · +
petL · PZ101799.1 · 65,854–65,949 bp · +
petG · PZ101799.1 · 66,125–66,238 bp · +
psaJ · PZ101799.1 · 66,972–67,106 bp · +
rpl33 · PZ101799.1 · 67,554–67,754 bp · +
rps18 · PZ101799.1 · 67,939–68,244 bp · +
rps12 · PZ101799.1 · 138,570–139,360 bp · +
psbB · PZ101799.1 · 72,291–73,817 bp · +
psbT · PZ101799.1 · 73,990–74,091 bp · +
psbH · PZ101799.1 · 74,391–74,612 bp · +
petB · PZ101799.1 · 74,739–76,102 bp · +
petD · PZ101799.1 · 76,291–77,489 bp · +
ycf2 · PZ101799.1 · 86,054–92,857 bp · +
trnV-GAC · PZ101799.1 · 99,483–99,554 bp · +
rrn16 · PZ101799.1 · 99,781–101,271 bp · +
trnI-GAU · PZ101799.1 · 101,570–102,590 bp · +
trnA-UGC · PZ101799.1 · 102,655–103,545 bp · +
rrn23 · PZ101799.1 · 103,723–106,532 bp · +
rrn4.5 · PZ101799.1 · 106,632–106,734 bp · +
rrn5 · PZ101799.1 · 106,995–107,115 bp · +
trnR-ACG · PZ101799.1 · 107,359–107,432 bp · +
rpl32 · PZ101799.1 · 112,061–112,231 bp · +
trnL-UAG · PZ101799.1 · 112,905–112,984 bp · +
ccsA · PZ101799.1 · 113,077–114,048 bp · +
trnN-GUU · PZ101799.1 · 128,394–128,465 bp · +
rps7 · PZ101799.1 · 139,414–139,881 bp · +
ndhB · PZ101799.1 · 140,200–142,344 bp · +
trnL-CAA · PZ101799.1 · 142,919–142,999 bp · +
trnI-CAU · PZ101799.1 · 150,493–150,566 bp · +
rpl23 · PZ101799.1 · 150,732–151,013 bp · +
rpl2 · PZ101799.1 · 151,037–152,528 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Mosla japonica
ANNOTATED PLASTOME
PZ101799.1
152,646 bp · 130 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38162 76323 114484 152646 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
131 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 7 80 74 Locate
psbA gene − 424 1482 1059 Locate
trnK-UUU gene − 1709 4298 2590 Locate
matK gene − 2023 3567 1545 Locate
rps16 gene − 4829 5963 1135 Locate
trnQ-UUG gene − 7001 7072 72 Locate
psbK gene + 7460 7654 195 Locate
psbI gene + 8022 8132 111 Locate
trnS-GCU gene − 8317 8404 88 Locate
trnG-UCC gene + 9100 9846 747 Locate
trnR-UCU gene + 10040 10111 72 Locate
atpA gene − 10216 11739 1524 Locate
atpF gene − 11832 13077 1246 Locate
atpH gene − 13356 13601 246 Locate
atpI gene − 14629 15372 744 Locate
rps2 gene − 15602 16312 711 Locate
rpoC2 gene − 16523 20719 4197 Locate
rpoC1 gene − 20884 23705 2822 Locate
rpoB gene − 23732 26944 3213 Locate
trnC-GCA gene + 28119 28189 71 Locate
petN gene + 28351 28446 96 Locate
psbM gene − 29478 29582 105 Locate
trnD-GUC gene − 30110 30183 74 Locate
trnY-GUA gene − 30294 30377 84 Locate
trnE-UUC gene − 30450 30522 73 Locate
trnT-GGU gene + 31101 31172 72 Locate
psbD gene + 32483 33544 1062 Locate
psbC gene + 33492 34913 1422 Locate
trnS-UGA gene − 35161 35242 82 Locate
psbZ gene + 35590 35778 189 Locate
trnG-GCC gene + 36055 36125 71 Locate
trnfM-CAU gene − 36300 36373 74 Locate
rps14 gene − 36523 36825 303 Locate
psaB gene − 36947 39151 2205 Locate
psaA gene − 39177 41429 2253 Locate
ycf3 gene − 42091 44047 1957 Locate
trnS-GGA gene + 44884 44970 87 Locate
rps4 gene − 45190 45795 606 Locate
trnT-UGU gene − 46269 46341 73 Locate
trnL-UAA gene + 47042 47617 576 Locate
trnF-GAA gene + 47925 47997 73 Locate
ndhJ gene − 48683 49159 477 Locate
ndhK gene − 49270 49947 678 Locate
ndhC gene − 49999 50361 363 Locate
trnV-UAC gene − 51356 51998 643 Locate
trnM-CAU gene + 52178 52250 73 Locate
atpE gene − 52465 52866 402 Locate
atpB gene − 52863 54359 1497 Locate
rbcL gene + 55157 56617 1461 Locate
accD gene + 57309 58790 1482 Locate
psaI gene + 59513 59623 111 Locate
ycf4 gene + 60069 60623 555 Locate
cemA gene + 61278 61967 690 Locate
petA gene + 62195 63157 963 Locate
psbJ gene − 64215 64337 123 Locate
psbL gene − 64472 64588 117 Locate
psbF gene − 64612 64731 120 Locate
psbE gene − 64746 64997 252 Locate
petL gene + 65854 65949 96 Locate
petG gene + 66125 66238 114 Locate
trnW-CCA gene − 66365 66438 74 Locate
trnP-UGG gene − 66612 66685 74 Locate
psaJ gene + 66972 67106 135 Locate
rpl33 gene + 67554 67754 201 Locate
rps18 gene + 67939 68244 306 Locate
rpl20 gene − 68476 68862 387 Locate
rps12 gene − 69676 69801 126 Locate
clpP gene − 69920 71835 1916 Locate
psbB gene + 72291 73817 1527 Locate
psbT gene + 73990 74091 102 Locate
psbN gene − 74154 74285 132 Locate
psbH gene + 74391 74612 222 Locate
petB gene + 74739 76102 1364 Locate
petD gene + 76291 77489 1199 Locate
rpoA gene − 77666 78673 1008 Locate
rps11 gene − 78744 79160 417 Locate
rpl36 gene − 79270 79383 114 Locate
infA gene − 79501 79734 234 Locate
rps8 gene − 79861 80265 405 Locate
rpl14 gene − 80438 80806 369 Locate
rpl16 gene − 80938 82211 1274 Locate
rps3 gene − 82354 83016 663 Locate
rpl22 gene − 83001 83468 468 Locate
rps19 gene − 83533 83811 279 Locate
rpl2 gene − 83933 85421 1489 Locate
rpl23 gene − 85445 85726 282 Locate
trnI-CAU gene − 85892 85965 74 Locate
ycf2 gene + 86054 92857 6804 Locate
trnL-CAA gene − 93459 93539 81 Locate
ndhB gene − 94114 96258 2145 Locate
rps7 gene − 96577 97044 468 Locate
rps12 gene − 97098 97888 791 Locate
trnV-GAC gene + 99483 99554 72 Locate
rrn16 gene + 99781 101271 1491 Locate
trnI-GAU gene + 101570 102590 1021 Locate
trnA-UGC gene + 102655 103545 891 Locate
rrn23 gene + 103723 106532 2810 Locate
rrn4.5 gene + 106632 106734 103 Locate
rrn5 gene + 106995 107115 121 Locate
trnR-ACG gene + 107359 107432 74 Locate
trnN-GUU gene − 107993 108064 72 Locate
ndhF gene − 109418 111649 2232 Locate
rpl32 gene + 112061 112231 171 Locate
trnL-UAG gene + 112905 112984 80 Locate
ccsA gene + 113077 114048 972 Locate
ndhD gene − 114301 115830 1530 Locate
psaC gene − 115929 116174 246 Locate
ndhE gene − 116424 116729 306 Locate
ndhG gene − 116952 117482 531 Locate
ndhI gene − 117851 118342 492 Locate
ndhA gene − 118423 120558 2136 Locate
ndhH gene − 120560 121771 1212 Locate
rps15 gene − 121841 122113 273 Locate
ycf1 gene − 122515 128175 5661 Locate
trnN-GUU gene + 128394 128465 72 Locate
trnR-ACG gene − 129026 129099 74 Locate
rrn5 gene − 129343 129463 121 Locate
rrn4.5 gene − 129724 129826 103 Locate
rrn23 gene − 129926 132735 2810 Locate
trnA-UGC gene − 132913 133803 891 Locate
trnI-GAU gene − 133868 134888 1021 Locate
rrn16 gene − 135187 136677 1491 Locate
trnV-GAC gene − 136904 136975 72 Locate
rps12 gene + 138570 139360 791 Locate
rps7 gene + 139414 139881 468 Locate
ndhB gene + 140200 142344 2145 Locate
trnL-CAA gene + 142919 142999 81 Locate
ycf2 gene − 143601 150404 6804 Locate
trnI-CAU gene + 150493 150566 74 Locate
rpl23 gene + 150732 151013 282 Locate
rpl2 gene + 151037 152528 1492 Locate
Status Available
Accession PZ101799.1
Length 152,646 bp
GC content 37.7%
Annotated genes 130
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 12 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources