Coordinate-aware organelle record

Mosla pauciflora chloroplast genome

Available PZ101796.1 152,532 bp 130 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 4-77 bp · − strandpsbA · gene · 420-1,478 bp · − strandtrnK-UUU · gene · 1,705-4,294 bp · − strandmatK · gene · 2,019-3,563 bp · − strandrps16 · gene · 4,825-5,958 bp · − strandtrnQ-UUG · gene · 7,001-7,072 bp · − strandpsbK · gene · 7,460-7,654 bp · + strandpsbI · gene · 8,021-8,131 bp · + strandtrnS-GCU · gene · 8,318-8,405 bp · − strandtrnG-UCC · gene · 9,100-9,846 bp · + strandtrnR-UCU · gene · 10,040-10,111 bp · + strandatpA · gene · 10,216-11,739 bp · − strandatpF · gene · 11,832-13,077 bp · − strandatpH · gene · 13,357-13,602 bp · − strandatpI · gene · 14,635-15,378 bp · − strandrps2 · gene · 15,608-16,318 bp · − strandrpoC2 · gene · 16,529-20,725 bp · − strandrpoC1 · gene · 20,890-23,711 bp · − strandrpoB · gene · 23,738-26,950 bp · − strandtrnC-GCA · gene · 28,125-28,195 bp · + strandpetN · gene · 28,357-28,452 bp · + strandpsbM · gene · 29,480-29,584 bp · − strandtrnD-GUC · gene · 30,112-30,185 bp · − strandtrnY-GUA · gene · 30,296-30,379 bp · − strandtrnE-UUC · gene · 30,452-30,524 bp · − strandtrnT-GGU · gene · 31,103-31,174 bp · + strandpsbD · gene · 32,480-33,541 bp · + strandpsbC · gene · 33,489-34,910 bp · + strandtrnS-UGA · gene · 35,158-35,239 bp · − strandpsbZ · gene · 35,587-35,775 bp · + strandtrnG-GCC · gene · 36,053-36,123 bp · + strandtrnfM-CAU · gene · 36,298-36,371 bp · − strandrps14 · gene · 36,521-36,823 bp · − strandpsaB · gene · 36,945-39,149 bp · − strandpsaA · gene · 39,175-41,427 bp · − strandycf3 · gene · 42,089-44,043 bp · − strandtrnS-GGA · gene · 44,878-44,964 bp · + strandrps4 · gene · 45,184-45,789 bp · − strandtrnT-UGU · gene · 46,262-46,334 bp · − strandtrnL-UAA · gene · 47,017-47,592 bp · + strandtrnF-GAA · gene · 47,900-47,972 bp · + strandndhJ · gene · 48,658-49,134 bp · − strandndhK · gene · 49,245-49,922 bp · − strandndhC · gene · 49,974-50,336 bp · − strandtrnV-UAC · gene · 51,330-51,972 bp · − strandtrnM-CAU · gene · 52,152-52,224 bp · + strandatpE · gene · 52,439-52,840 bp · − strandatpB · gene · 52,837-54,333 bp · − strandrbcL · gene · 55,126-56,586 bp · + strandaccD · gene · 57,278-58,759 bp · + strandpsaI · gene · 59,470-59,580 bp · + strandycf4 · gene · 60,026-60,580 bp · + strandcemA · gene · 61,235-61,924 bp · + strandpetA · gene · 62,159-63,121 bp · + strandpsbJ · gene · 64,168-64,290 bp · − strandpsbL · gene · 64,425-64,541 bp · − strandpsbF · gene · 64,565-64,684 bp · − strandpsbE · gene · 64,699-64,950 bp · − strandpetL · gene · 65,807-65,902 bp · + strandpetG · gene · 66,078-66,191 bp · + strandtrnW-CCA · gene · 66,318-66,391 bp · − strandtrnP-UGG · gene · 66,565-66,638 bp · − strandpsaJ · gene · 66,925-67,059 bp · + strandrpl33 · gene · 67,501-67,701 bp · + strandrps18 · gene · 67,886-68,191 bp · + strandrpl20 · gene · 68,423-68,809 bp · − strandrps12 · gene · 69,619-97,774 bp · − strandrps12 · gene · 69,619-139,246 bp · + strandclpP · gene · 69,863-71,777 bp · − strandpsbB · gene · 72,233-73,759 bp · + strandpsbT · gene · 73,932-74,033 bp · + strandpsbN · gene · 74,096-74,227 bp · − strandpsbH · gene · 74,333-74,554 bp · + strandpetB · gene · 74,680-76,043 bp · + strandpetD · gene · 76,232-77,430 bp · + strandrpoA · gene · 77,607-78,614 bp · − strandrps11 · gene · 78,685-79,101 bp · − strandrpl36 · gene · 79,211-79,324 bp · − strandinfA · gene · 79,442-79,675 bp · − strandrps8 · gene · 79,802-80,206 bp · − strandrpl14 · gene · 80,379-80,747 bp · − strandrpl16 · gene · 80,879-82,152 bp · − strandrps3 · gene · 82,295-82,957 bp · − strandrpl22 · gene · 82,942-83,409 bp · − strandrps19 · gene · 83,474-83,752 bp · − strandrpl2 · gene · 83,819-85,307 bp · − strandrpl23 · gene · 85,331-85,612 bp · − strandtrnI-CAU · gene · 85,778-85,851 bp · − strandycf2 · gene · 85,940-92,743 bp · + strandtrnL-CAA · gene · 93,345-93,425 bp · − strandndhB · gene · 94,000-96,144 bp · − strandrps7 · gene · 96,463-96,930 bp · − strandtrnV-GAC · gene · 99,369-99,440 bp · + strandrrn16 · gene · 99,667-101,157 bp · + strandtrnI-GAU · gene · 101,456-102,476 bp · + strandtrnA-UGC · gene · 102,541-103,431 bp · + strandrrn23 · gene · 103,609-106,418 bp · + strandrrn4.5 · gene · 106,518-106,620 bp · + strandrrn5 · gene · 106,881-107,001 bp · + strandtrnR-ACG · gene · 107,245-107,318 bp · + strandtrnN-GUU · gene · 107,879-107,950 bp · − strandndhF · gene · 109,304-111,535 bp · − strandrpl32 · gene · 111,949-112,119 bp · + strandtrnL-UAG · gene · 112,793-112,872 bp · + strandccsA · gene · 112,965-113,924 bp · + strandndhD · gene · 114,188-115,717 bp · − strandpsaC · gene · 115,816-116,061 bp · − strandndhE · gene · 116,311-116,616 bp · − strandndhG · gene · 116,839-117,369 bp · − strandndhI · gene · 117,738-118,229 bp · − strandndhA · gene · 118,310-120,444 bp · − strandndhH · gene · 120,446-121,657 bp · − strandrps15 · gene · 121,727-121,999 bp · − strandycf1 · gene · 122,401-128,061 bp · − strandtrnN-GUU · gene · 128,280-128,351 bp · + strandtrnR-ACG · gene · 128,912-128,985 bp · − strandrrn5 · gene · 129,229-129,349 bp · − strandrrn4.5 · gene · 129,610-129,712 bp · − strandrrn23 · gene · 129,812-132,621 bp · − strandtrnA-UGC · gene · 132,799-133,689 bp · − strandtrnI-GAU · gene · 133,754-134,774 bp · − strandrrn16 · gene · 135,073-136,563 bp · − strandtrnV-GAC · gene · 136,790-136,861 bp · − strandrps7 · gene · 139,300-139,767 bp · + strandndhB · gene · 140,086-142,230 bp · + strandtrnL-CAA · gene · 142,805-142,885 bp · + strandycf2 · gene · 143,487-150,290 bp · − strandtrnI-CAU · gene · 150,379-150,452 bp · + strandrpl23 · gene · 150,618-150,899 bp · + strandrpl2 · gene · 150,923-152,411 bp · + strandMosla paucifloraANNOTATED PLASTOMEPZ101796.1152,532 bp · 130 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: PZ101796.1Features: 130 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

130 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−37774
psbAgenephotosystem-ii−41914781059
trnK-UUUgenetranslation-rna−170442942590
matKgeneother−201835631545
rps16generibosomal-protein−482459581134
trnQ-UUGgenetranslation-rna−7000707272
psbKgenephotosystem-ii+74597654195
psbIgenephotosystem-ii+80208131111
trnS-GCUgenetranslation-rna−8317840588
trnG-UCCgenetranslation-rna+90999846747
trnR-UCUgenetranslation-rna+100391011172
atpAgeneatp-synthase−10215117391524
atpFgeneatp-synthase−11831130771246
atpHgeneatp-synthase−1335613602246
atpIgeneatp-synthase−1463415378744
rps2generibosomal-protein−1560716318711
rpoC2generna-polymerase−16528207254197
rpoC1generna-polymerase−20889237112822
rpoBgenerna-polymerase−23737269503213
trnC-GCAgenetranslation-rna+281242819571
petNgenecytochrome+283562845296
psbMgenephotosystem-ii−2947929584105
trnD-GUCgenetranslation-rna−301113018574
trnY-GUAgenetranslation-rna−302953037984
trnE-UUCgenetranslation-rna−304513052473
trnT-GGUgenetranslation-rna+311023117472
psbDgenephotosystem-ii+32479335411062
psbCgenephotosystem-ii+33488349101422
trnS-UGAgenetranslation-rna−351573523982
psbZgenephotosystem-ii+3558635775189
trnG-GCCgenetranslation-rna+360523612371
trnfM-CAUgenetranslation-rna−362973637174
rps14generibosomal-protein−3652036823303
psaBgenephotosystem-i−36944391492205
psaAgenephotosystem-i−39174414272253
ycf3geneother−42088440431955
trnS-GGAgenetranslation-rna+448774496487
rps4generibosomal-protein−4518345789606
trnT-UGUgenetranslation-rna−462614633473
trnL-UAAgenetranslation-rna+4701647592576
trnF-GAAgenetranslation-rna+478994797273
ndhJgenenad-dehydrogenase−4865749134477
ndhKgenenad-dehydrogenase−4924449922678
ndhCgenenad-dehydrogenase−4997350336363
trnV-UACgenetranslation-rna−5132951972643
trnM-CAUgenetranslation-rna+521515222473
atpEgeneatp-synthase−5243852840402
atpBgeneatp-synthase−52836543331497
rbcLgeneother+55125565861461
accDgeneother+57277587591482
psaIgenephotosystem-i+5946959580111
ycf4geneother+6002560580555
cemAgeneother+6123461924690
petAgenecytochrome+6215863121963
psbJgenephotosystem-ii−6416764290123
psbLgenephotosystem-ii−6442464541117
psbFgenephotosystem-ii−6456464684120
psbEgenephotosystem-ii−6469864950252
petLgenecytochrome+658066590296
petGgenecytochrome+6607766191114
trnW-CCAgenetranslation-rna−663176639174
trnP-UGGgenetranslation-rna−665646663874
psaJgenephotosystem-i+6692467059135
rpl33generibosomal-protein+6750067701201
rps18generibosomal-protein+6788568191306
rpl20generibosomal-protein−6842268809387
rps12generibosomal-protein−696189777428156
rps12generibosomal-protein+6961813924669628
clpPgeneother−69862717771915
psbBgenephotosystem-ii+72232737591527
psbTgenephotosystem-ii+7393174033102
psbNgenephotosystem-ii−7409574227132
psbHgenephotosystem-ii+7433274554222
petBgenecytochrome+74679760431364
petDgenecytochrome+76231774301199
rpoAgenerna-polymerase−77606786141008
rps11generibosomal-protein−7868479101417
rpl36generibosomal-protein−7921079324114
infAgeneother−7944179675234
rps8generibosomal-protein−7980180206405
rpl14generibosomal-protein−8037880747369
rpl16generibosomal-protein−80878821521274
rps3generibosomal-protein−8229482957663
rpl22generibosomal-protein−8294183409468
rps19generibosomal-protein−8347383752279
rpl2generibosomal-protein−83818853071489
rpl23generibosomal-protein−8533085612282
trnI-CAUgenetranslation-rna−857778585174
ycf2geneother+85939927436804
trnL-CAAgenetranslation-rna−933449342581
ndhBgenenad-dehydrogenase−93999961442145
rps7generibosomal-protein−9646296930468
trnV-GACgenetranslation-rna+993689944072
rrn16generibosomal-rna+996661011571491
trnI-GAUgenetranslation-rna+1014551024761021
trnA-UGCgenetranslation-rna+102540103431891
rrn23generibosomal-rna+1036081064182810
rrn4.5generibosomal-rna+106517106620103
rrn5generibosomal-rna+106880107001121
trnR-ACGgenetranslation-rna+10724410731874
trnN-GUUgenetranslation-rna−10787810795072
ndhFgenenad-dehydrogenase−1093031115352232
rpl32generibosomal-protein+111948112119171
trnL-UAGgenetranslation-rna+11279211287280
ccsAgeneother+112964113924960
ndhDgenenad-dehydrogenase−1141871157171530
psaCgenephotosystem-i−115815116061246
ndhEgenenad-dehydrogenase−116310116616306
ndhGgenenad-dehydrogenase−116838117369531
ndhIgenenad-dehydrogenase−117737118229492
ndhAgenenad-dehydrogenase−1183091204442135
ndhHgenenad-dehydrogenase−1204451216571212
rps15generibosomal-protein−121726121999273
ycf1geneother−1224001280615661
trnN-GUUgenetranslation-rna+12827912835172
trnR-ACGgenetranslation-rna−12891112898574
rrn5generibosomal-rna−129228129349121
rrn4.5generibosomal-rna−129609129712103
rrn23generibosomal-rna−1298111326212810
trnA-UGCgenetranslation-rna−132798133689891
trnI-GAUgenetranslation-rna−1337531347741021
rrn16generibosomal-rna−1350721365631491
trnV-GACgenetranslation-rna−13678913686172
rps7generibosomal-protein+139299139767468
ndhBgenenad-dehydrogenase+1400851422302145
trnL-CAAgenetranslation-rna+14280414288581
ycf2geneother−1434861502906804
trnI-CAUgenetranslation-rna+15037815045274
rpl23generibosomal-protein+150617150899282
rpl2generibosomal-protein+1509221524111489

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources