Mosla scabra chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PZ101809.1 · 7–80 bp · −
psbA · PZ101809.1 · 423–1,481 bp · −
trnK-UUU · PZ101809.1 · 1,708–4,297 bp · −
matK · PZ101809.1 · 2,022–3,566 bp · −
rps16 · PZ101809.1 · 4,827–5,960 bp · −
trnQ-UUG · PZ101809.1 · 6,997–7,068 bp · −
trnS-GCU · PZ101809.1 · 8,313–8,400 bp · −
atpA · PZ101809.1 · 10,211–11,734 bp · −
atpF · PZ101809.1 · 11,827–13,072 bp · −
atpH · PZ101809.1 · 13,352–13,597 bp · −
atpI · PZ101809.1 · 14,625–15,368 bp · −
rps2 · PZ101809.1 · 15,600–16,310 bp · −
rpoC2 · PZ101809.1 · 16,521–20,717 bp · −
rpoC1 · PZ101809.1 · 20,882–23,703 bp · −
rpoB · PZ101809.1 · 23,730–26,942 bp · −
psbM · PZ101809.1 · 29,471–29,575 bp · −
trnD-GUC · PZ101809.1 · 30,103–30,176 bp · −
trnY-GUA · PZ101809.1 · 30,287–30,370 bp · −
trnE-UUC · PZ101809.1 · 30,443–30,515 bp · −
trnS-UGA · PZ101809.1 · 35,153–35,234 bp · −
trnfM-CAU · PZ101809.1 · 36,292–36,365 bp · −
rps14 · PZ101809.1 · 36,515–36,817 bp · −
psaB · PZ101809.1 · 36,939–39,143 bp · −
psaA · PZ101809.1 · 39,169–41,421 bp · −
ycf3 · PZ101809.1 · 42,083–44,037 bp · −
rps4 · PZ101809.1 · 45,179–45,784 bp · −
trnT-UGU · PZ101809.1 · 46,258–46,330 bp · −
ndhJ · PZ101809.1 · 48,683–49,159 bp · −
ndhK · PZ101809.1 · 49,270–49,947 bp · −
ndhC · PZ101809.1 · 49,999–50,361 bp · −
trnV-UAC · PZ101809.1 · 51,355–51,997 bp · −
atpE · PZ101809.1 · 52,464–52,865 bp · −
atpB · PZ101809.1 · 52,862–54,358 bp · −
psbJ · PZ101809.1 · 64,202–64,324 bp · −
psbL · PZ101809.1 · 64,459–64,575 bp · −
psbF · PZ101809.1 · 64,599–64,718 bp · −
psbE · PZ101809.1 · 64,733–64,984 bp · −
trnW-CCA · PZ101809.1 · 66,352–66,425 bp · −
trnP-UGG · PZ101809.1 · 66,599–66,672 bp · −
rpl20 · PZ101809.1 · 68,458–68,844 bp · −
rps12 · PZ101809.1 · 69,654–69,779 bp · −
rps12 · PZ101809.1 · 97,018–97,808 bp · −
clpP · PZ101809.1 · 69,898–71,812 bp · −
psbN · PZ101809.1 · 74,131–74,262 bp · −
rpoA · PZ101809.1 · 77,642–78,649 bp · −
rps11 · PZ101809.1 · 78,720–79,136 bp · −
rpl36 · PZ101809.1 · 79,246–79,359 bp · −
infA · PZ101809.1 · 79,477–79,710 bp · −
rps8 · PZ101809.1 · 79,835–80,239 bp · −
rpl14 · PZ101809.1 · 80,412–80,780 bp · −
rpl16 · PZ101809.1 · 80,912–82,185 bp · −
rps3 · PZ101809.1 · 82,328–82,990 bp · −
rpl22 · PZ101809.1 · 82,975–83,442 bp · −
rps19 · PZ101809.1 · 83,507–83,785 bp · −
rpl2 · PZ101809.1 · 83,852–85,340 bp · −
rpl23 · PZ101809.1 · 85,364–85,645 bp · −
trnI-CAU · PZ101809.1 · 85,811–85,884 bp · −
trnL-CAA · PZ101809.1 · 93,379–93,459 bp · −
ndhB · PZ101809.1 · 94,034–96,178 bp · −
rps7 · PZ101809.1 · 96,497–96,964 bp · −
trnN-GUU · PZ101809.1 · 107,913–107,984 bp · −
ndhF · PZ101809.1 · 109,338–111,569 bp · −
ndhD · PZ101809.1 · 114,220–115,749 bp · −
psaC · PZ101809.1 · 115,848–116,093 bp · −
ndhE · PZ101809.1 · 116,343–116,648 bp · −
ndhG · PZ101809.1 · 116,871–117,401 bp · −
ndhI · PZ101809.1 · 117,770–118,261 bp · −
ndhA · PZ101809.1 · 118,342–120,475 bp · −
ndhH · PZ101809.1 · 120,477–121,688 bp · −
rps15 · PZ101809.1 · 121,758–122,030 bp · −
ycf1 · PZ101809.1 · 122,432–128,092 bp · −
trnR-ACG · PZ101809.1 · 128,943–129,016 bp · −
rrn5 · PZ101809.1 · 129,260–129,380 bp · −
rrn4.5 · PZ101809.1 · 129,641–129,743 bp · −
rrn23 · PZ101809.1 · 129,843–132,652 bp · −
trnA-UGC · PZ101809.1 · 132,830–133,720 bp · −
trnI-GAU · PZ101809.1 · 133,785–134,805 bp · −
rrn16 · PZ101809.1 · 135,104–136,594 bp · −
trnV-GAC · PZ101809.1 · 136,821–136,892 bp · −
ycf2 · PZ101809.1 · 143,519–150,322 bp · −
psbK · PZ101809.1 · 7,456–7,650 bp · +
psbI · PZ101809.1 · 8,017–8,127 bp · +
trnG-UCC · PZ101809.1 · 9,095–9,841 bp · +
trnR-UCU · PZ101809.1 · 10,035–10,106 bp · +
trnC-GCA · PZ101809.1 · 28,112–28,182 bp · +
petN · PZ101809.1 · 28,344–28,439 bp · +
trnT-GGU · PZ101809.1 · 31,095–31,166 bp · +
psbD · PZ101809.1 · 32,475–33,536 bp · +
psbC · PZ101809.1 · 33,484–34,905 bp · +
psbZ · PZ101809.1 · 35,582–35,770 bp · +
trnG-GCC · PZ101809.1 · 36,047–36,117 bp · +
trnS-GGA · PZ101809.1 · 44,873–44,959 bp · +
trnL-UAA · PZ101809.1 · 47,042–47,617 bp · +
trnF-GAA · PZ101809.1 · 47,925–47,997 bp · +
trnM-CAU · PZ101809.1 · 52,177–52,249 bp · +
rbcL · PZ101809.1 · 55,151–56,611 bp · +
accD · PZ101809.1 · 57,303–58,784 bp · +
psaI · PZ101809.1 · 59,501–59,611 bp · +
ycf4 · PZ101809.1 · 60,057–60,611 bp · +
cemA · PZ101809.1 · 61,266–61,955 bp · +
petA · PZ101809.1 · 62,183–63,145 bp · +
petL · PZ101809.1 · 65,841–65,936 bp · +
petG · PZ101809.1 · 66,112–66,225 bp · +
psaJ · PZ101809.1 · 66,959–67,093 bp · +
rpl33 · PZ101809.1 · 67,535–67,735 bp · +
rps18 · PZ101809.1 · 67,920–68,225 bp · +
rps12 · PZ101809.1 · 138,487–139,277 bp · +
psbB · PZ101809.1 · 72,268–73,794 bp · +
psbT · PZ101809.1 · 73,967–74,068 bp · +
psbH · PZ101809.1 · 74,368–74,589 bp · +
petB · PZ101809.1 · 74,715–76,078 bp · +
petD · PZ101809.1 · 76,267–77,465 bp · +
ycf2 · PZ101809.1 · 85,973–92,776 bp · +
trnV-GAC · PZ101809.1 · 99,403–99,474 bp · +
rrn16 · PZ101809.1 · 99,701–101,191 bp · +
trnI-GAU · PZ101809.1 · 101,490–102,510 bp · +
trnA-UGC · PZ101809.1 · 102,575–103,465 bp · +
rrn23 · PZ101809.1 · 103,643–106,452 bp · +
rrn4.5 · PZ101809.1 · 106,552–106,654 bp · +
rrn5 · PZ101809.1 · 106,915–107,035 bp · +
trnR-ACG · PZ101809.1 · 107,279–107,352 bp · +
rpl32 · PZ101809.1 · 111,981–112,151 bp · +
trnL-UAG · PZ101809.1 · 112,825–112,904 bp · +
ccsA · PZ101809.1 · 112,997–113,956 bp · +
trnN-GUU · PZ101809.1 · 128,311–128,382 bp · +
rps7 · PZ101809.1 · 139,331–139,798 bp · +
ndhB · PZ101809.1 · 140,117–142,261 bp · +
trnL-CAA · PZ101809.1 · 142,836–142,916 bp · +
trnI-CAU · PZ101809.1 · 150,411–150,484 bp · +
rpl23 · PZ101809.1 · 150,650–150,931 bp · +
rpl2 · PZ101809.1 · 150,955–152,443 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Mosla scabra
ANNOTATED PLASTOME
PZ101809.1
152,564 bp · 130 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38141 76282 114423 152564 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
131 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 7 80 74 Locate
psbA gene − 423 1481 1059 Locate
trnK-UUU gene − 1708 4297 2590 Locate
matK gene − 2022 3566 1545 Locate
rps16 gene − 4827 5960 1134 Locate
trnQ-UUG gene − 6997 7068 72 Locate
psbK gene + 7456 7650 195 Locate
psbI gene + 8017 8127 111 Locate
trnS-GCU gene − 8313 8400 88 Locate
trnG-UCC gene + 9095 9841 747 Locate
trnR-UCU gene + 10035 10106 72 Locate
atpA gene − 10211 11734 1524 Locate
atpF gene − 11827 13072 1246 Locate
atpH gene − 13352 13597 246 Locate
atpI gene − 14625 15368 744 Locate
rps2 gene − 15600 16310 711 Locate
rpoC2 gene − 16521 20717 4197 Locate
rpoC1 gene − 20882 23703 2822 Locate
rpoB gene − 23730 26942 3213 Locate
trnC-GCA gene + 28112 28182 71 Locate
petN gene + 28344 28439 96 Locate
psbM gene − 29471 29575 105 Locate
trnD-GUC gene − 30103 30176 74 Locate
trnY-GUA gene − 30287 30370 84 Locate
trnE-UUC gene − 30443 30515 73 Locate
trnT-GGU gene + 31095 31166 72 Locate
psbD gene + 32475 33536 1062 Locate
psbC gene + 33484 34905 1422 Locate
trnS-UGA gene − 35153 35234 82 Locate
psbZ gene + 35582 35770 189 Locate
trnG-GCC gene + 36047 36117 71 Locate
trnfM-CAU gene − 36292 36365 74 Locate
rps14 gene − 36515 36817 303 Locate
psaB gene − 36939 39143 2205 Locate
psaA gene − 39169 41421 2253 Locate
ycf3 gene − 42083 44037 1955 Locate
trnS-GGA gene + 44873 44959 87 Locate
rps4 gene − 45179 45784 606 Locate
trnT-UGU gene − 46258 46330 73 Locate
trnL-UAA gene + 47042 47617 576 Locate
trnF-GAA gene + 47925 47997 73 Locate
ndhJ gene − 48683 49159 477 Locate
ndhK gene − 49270 49947 678 Locate
ndhC gene − 49999 50361 363 Locate
trnV-UAC gene − 51355 51997 643 Locate
trnM-CAU gene + 52177 52249 73 Locate
atpE gene − 52464 52865 402 Locate
atpB gene − 52862 54358 1497 Locate
rbcL gene + 55151 56611 1461 Locate
accD gene + 57303 58784 1482 Locate
psaI gene + 59501 59611 111 Locate
ycf4 gene + 60057 60611 555 Locate
cemA gene + 61266 61955 690 Locate
petA gene + 62183 63145 963 Locate
psbJ gene − 64202 64324 123 Locate
psbL gene − 64459 64575 117 Locate
psbF gene − 64599 64718 120 Locate
psbE gene − 64733 64984 252 Locate
petL gene + 65841 65936 96 Locate
petG gene + 66112 66225 114 Locate
trnW-CCA gene − 66352 66425 74 Locate
trnP-UGG gene − 66599 66672 74 Locate
psaJ gene + 66959 67093 135 Locate
rpl33 gene + 67535 67735 201 Locate
rps18 gene + 67920 68225 306 Locate
rpl20 gene − 68458 68844 387 Locate
rps12 gene − 69654 69779 126 Locate
clpP gene − 69898 71812 1915 Locate
psbB gene + 72268 73794 1527 Locate
psbT gene + 73967 74068 102 Locate
psbN gene − 74131 74262 132 Locate
psbH gene + 74368 74589 222 Locate
petB gene + 74715 76078 1364 Locate
petD gene + 76267 77465 1199 Locate
rpoA gene − 77642 78649 1008 Locate
rps11 gene − 78720 79136 417 Locate
rpl36 gene − 79246 79359 114 Locate
infA gene − 79477 79710 234 Locate
rps8 gene − 79835 80239 405 Locate
rpl14 gene − 80412 80780 369 Locate
rpl16 gene − 80912 82185 1274 Locate
rps3 gene − 82328 82990 663 Locate
rpl22 gene − 82975 83442 468 Locate
rps19 gene − 83507 83785 279 Locate
rpl2 gene − 83852 85340 1489 Locate
rpl23 gene − 85364 85645 282 Locate
trnI-CAU gene − 85811 85884 74 Locate
ycf2 gene + 85973 92776 6804 Locate
trnL-CAA gene − 93379 93459 81 Locate
ndhB gene − 94034 96178 2145 Locate
rps7 gene − 96497 96964 468 Locate
rps12 gene − 97018 97808 791 Locate
trnV-GAC gene + 99403 99474 72 Locate
rrn16 gene + 99701 101191 1491 Locate
trnI-GAU gene + 101490 102510 1021 Locate
trnA-UGC gene + 102575 103465 891 Locate
rrn23 gene + 103643 106452 2810 Locate
rrn4.5 gene + 106552 106654 103 Locate
rrn5 gene + 106915 107035 121 Locate
trnR-ACG gene + 107279 107352 74 Locate
trnN-GUU gene − 107913 107984 72 Locate
ndhF gene − 109338 111569 2232 Locate
rpl32 gene + 111981 112151 171 Locate
trnL-UAG gene + 112825 112904 80 Locate
ccsA gene + 112997 113956 960 Locate
ndhD gene − 114220 115749 1530 Locate
psaC gene − 115848 116093 246 Locate
ndhE gene − 116343 116648 306 Locate
ndhG gene − 116871 117401 531 Locate
ndhI gene − 117770 118261 492 Locate
ndhA gene − 118342 120475 2134 Locate
ndhH gene − 120477 121688 1212 Locate
rps15 gene − 121758 122030 273 Locate
ycf1 gene − 122432 128092 5661 Locate
trnN-GUU gene + 128311 128382 72 Locate
trnR-ACG gene − 128943 129016 74 Locate
rrn5 gene − 129260 129380 121 Locate
rrn4.5 gene − 129641 129743 103 Locate
rrn23 gene − 129843 132652 2810 Locate
trnA-UGC gene − 132830 133720 891 Locate
trnI-GAU gene − 133785 134805 1021 Locate
rrn16 gene − 135104 136594 1491 Locate
trnV-GAC gene − 136821 136892 72 Locate
rps12 gene + 138487 139277 791 Locate
rps7 gene + 139331 139798 468 Locate
ndhB gene + 140117 142261 2145 Locate
trnL-CAA gene + 142836 142916 81 Locate
ycf2 gene − 143519 150322 6804 Locate
trnI-CAU gene + 150411 150484 74 Locate
rpl23 gene + 150650 150931 282 Locate
rpl2 gene + 150955 152443 1489 Locate
Status Available
Accession PZ101809.1
Length 152,564 bp
GC content 37.8%
Annotated genes 130
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 12 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources