Mosla soochowensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PZ101794.1 · 2–75 bp · −
psbA · PZ101794.1 · 419–1,477 bp · −
trnK-UUU · PZ101794.1 · 1,704–4,293 bp · −
matK · PZ101794.1 · 2,018–3,562 bp · −
rps16 · PZ101794.1 · 4,822–5,955 bp · −
trnQ-UUG · PZ101794.1 · 6,992–7,063 bp · −
trnS-GCU · PZ101794.1 · 8,307–8,394 bp · −
atpA · PZ101794.1 · 10,205–11,728 bp · −
atpF · PZ101794.1 · 11,829–13,074 bp · −
atpH · PZ101794.1 · 13,353–13,598 bp · −
atpI · PZ101794.1 · 14,626–15,369 bp · −
rps2 · PZ101794.1 · 15,599–16,309 bp · −
rpoC2 · PZ101794.1 · 16,520–20,716 bp · −
rpoC1 · PZ101794.1 · 20,881–23,702 bp · −
rpoB · PZ101794.1 · 23,729–26,941 bp · −
psbM · PZ101794.1 · 29,470–29,574 bp · −
trnD-GUC · PZ101794.1 · 30,103–30,176 bp · −
trnY-GUA · PZ101794.1 · 30,287–30,370 bp · −
trnE-UUC · PZ101794.1 · 30,443–30,515 bp · −
trnS-UGA · PZ101794.1 · 35,150–35,231 bp · −
trnfM-CAU · PZ101794.1 · 36,288–36,361 bp · −
rps14 · PZ101794.1 · 36,511–36,813 bp · −
psaB · PZ101794.1 · 36,935–39,139 bp · −
psaA · PZ101794.1 · 39,165–41,417 bp · −
ycf3 · PZ101794.1 · 42,079–44,034 bp · −
rps4 · PZ101794.1 · 45,176–45,781 bp · −
trnT-UGU · PZ101794.1 · 46,255–46,327 bp · −
ndhJ · PZ101794.1 · 48,658–49,134 bp · −
ndhK · PZ101794.1 · 49,245–49,922 bp · −
ndhC · PZ101794.1 · 49,974–50,336 bp · −
trnV-UAC · PZ101794.1 · 51,330–51,972 bp · −
atpE · PZ101794.1 · 52,439–52,840 bp · −
atpB · PZ101794.1 · 52,837–54,333 bp · −
psbJ · PZ101794.1 · 64,176–64,298 bp · −
psbL · PZ101794.1 · 64,433–64,549 bp · −
psbF · PZ101794.1 · 64,573–64,692 bp · −
psbE · PZ101794.1 · 64,707–64,958 bp · −
trnW-CCA · PZ101794.1 · 66,326–66,399 bp · −
trnP-UGG · PZ101794.1 · 66,573–66,646 bp · −
rpl20 · PZ101794.1 · 68,431–68,817 bp · −
rps12 · PZ101794.1 · 69,628–69,753 bp · −
rps12 · PZ101794.1 · 96,993–97,783 bp · −
clpP · PZ101794.1 · 69,872–71,786 bp · −
psbN · PZ101794.1 · 74,105–74,236 bp · −
rpoA · PZ101794.1 · 77,616–78,623 bp · −
rps11 · PZ101794.1 · 78,694–79,110 bp · −
rpl36 · PZ101794.1 · 79,220–79,333 bp · −
infA · PZ101794.1 · 79,451–79,684 bp · −
rps8 · PZ101794.1 · 79,810–80,214 bp · −
rpl14 · PZ101794.1 · 80,387–80,755 bp · −
rpl16 · PZ101794.1 · 80,887–82,160 bp · −
rps3 · PZ101794.1 · 82,303–82,965 bp · −
rpl22 · PZ101794.1 · 82,950–83,417 bp · −
rps19 · PZ101794.1 · 83,482–83,760 bp · −
rpl2 · PZ101794.1 · 83,827–85,315 bp · −
rpl23 · PZ101794.1 · 85,339–85,620 bp · −
trnI-CAU · PZ101794.1 · 85,786–85,859 bp · −
trnL-CAA · PZ101794.1 · 93,354–93,434 bp · −
ndhB · PZ101794.1 · 94,009–96,153 bp · −
rps7 · PZ101794.1 · 96,472–96,939 bp · −
trnN-GUU · PZ101794.1 · 107,888–107,959 bp · −
ndhF · PZ101794.1 · 109,313–111,544 bp · −
ndhD · PZ101794.1 · 114,197–115,726 bp · −
psaC · PZ101794.1 · 115,825–116,070 bp · −
ndhE · PZ101794.1 · 116,320–116,625 bp · −
ndhG · PZ101794.1 · 116,848–117,378 bp · −
ndhI · PZ101794.1 · 117,747–118,238 bp · −
ndhA · PZ101794.1 · 118,319–120,452 bp · −
ndhH · PZ101794.1 · 120,454–121,665 bp · −
rps15 · PZ101794.1 · 121,735–122,007 bp · −
ycf1 · PZ101794.1 · 122,409–128,069 bp · −
trnR-ACG · PZ101794.1 · 128,920–128,993 bp · −
rrn5 · PZ101794.1 · 129,237–129,357 bp · −
rrn4.5 · PZ101794.1 · 129,618–129,720 bp · −
rrn23 · PZ101794.1 · 129,820–132,629 bp · −
trnA-UGC · PZ101794.1 · 132,807–133,697 bp · −
trnI-GAU · PZ101794.1 · 133,762–134,782 bp · −
rrn16 · PZ101794.1 · 135,081–136,571 bp · −
trnV-GAC · PZ101794.1 · 136,798–136,869 bp · −
ycf2 · PZ101794.1 · 143,496–150,299 bp · −
psbK · PZ101794.1 · 7,451–7,645 bp · +
psbI · PZ101794.1 · 8,012–8,122 bp · +
trnG-UCC · PZ101794.1 · 9,089–9,835 bp · +
trnR-UCU · PZ101794.1 · 10,029–10,100 bp · +
trnC-GCA · PZ101794.1 · 28,111–28,181 bp · +
petN · PZ101794.1 · 28,343–28,438 bp · +
trnT-GGU · PZ101794.1 · 31,094–31,165 bp · +
psbD · PZ101794.1 · 32,472–33,533 bp · +
psbC · PZ101794.1 · 33,481–34,902 bp · +
psbZ · PZ101794.1 · 35,579–35,767 bp · +
trnG-GCC · PZ101794.1 · 36,044–36,114 bp · +
trnS-GGA · PZ101794.1 · 44,870–44,956 bp · +
trnL-UAA · PZ101794.1 · 47,018–47,593 bp · +
trnF-GAA · PZ101794.1 · 47,901–47,973 bp · +
trnM-CAU · PZ101794.1 · 52,152–52,224 bp · +
rbcL · PZ101794.1 · 55,126–56,586 bp · +
accD · PZ101794.1 · 57,278–58,759 bp · +
psaI · PZ101794.1 · 59,476–59,586 bp · +
ycf4 · PZ101794.1 · 60,031–60,585 bp · +
cemA · PZ101794.1 · 61,240–61,929 bp · +
petA · PZ101794.1 · 62,157–63,119 bp · +
petL · PZ101794.1 · 65,815–65,910 bp · +
petG · PZ101794.1 · 66,086–66,199 bp · +
psaJ · PZ101794.1 · 66,933–67,067 bp · +
rpl33 · PZ101794.1 · 67,509–67,709 bp · +
rps18 · PZ101794.1 · 67,894–68,199 bp · +
rps12 · PZ101794.1 · 138,464–139,254 bp · +
psbB · PZ101794.1 · 72,242–73,768 bp · +
psbT · PZ101794.1 · 73,941–74,042 bp · +
psbH · PZ101794.1 · 74,342–74,563 bp · +
petB · PZ101794.1 · 74,689–76,052 bp · +
petD · PZ101794.1 · 76,241–77,439 bp · +
ycf2 · PZ101794.1 · 85,948–92,751 bp · +
trnV-GAC · PZ101794.1 · 99,378–99,449 bp · +
rrn16 · PZ101794.1 · 99,676–101,166 bp · +
trnI-GAU · PZ101794.1 · 101,465–102,485 bp · +
trnA-UGC · PZ101794.1 · 102,550–103,440 bp · +
rrn23 · PZ101794.1 · 103,618–106,427 bp · +
rrn4.5 · PZ101794.1 · 106,527–106,629 bp · +
rrn5 · PZ101794.1 · 106,890–107,010 bp · +
trnR-ACG · PZ101794.1 · 107,254–107,327 bp · +
rpl32 · PZ101794.1 · 111,958–112,128 bp · +
trnL-UAG · PZ101794.1 · 112,802–112,881 bp · +
ccsA · PZ101794.1 · 112,974–113,933 bp · +
trnN-GUU · PZ101794.1 · 128,288–128,359 bp · +
rps7 · PZ101794.1 · 139,308–139,775 bp · +
ndhB · PZ101794.1 · 140,094–142,238 bp · +
trnL-CAA · PZ101794.1 · 142,813–142,893 bp · +
trnI-CAU · PZ101794.1 · 150,388–150,461 bp · +
rpl23 · PZ101794.1 · 150,627–150,908 bp · +
rpl2 · PZ101794.1 · 150,932–152,420 bp · +
rps19 · PZ101794.1 · 152,487–152,765 bp · +
rpl22 · PZ101794.1 · 152,830–153,297 bp · +
rps3 · PZ101794.1 · 153,282–153,944 bp · +
rpl14 · PZ101794.1 · 155,492–155,860 bp · +
rps8 · PZ101794.1 · 156,033–156,437 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Mosla soochowensis
ANNOTATED PLASTOME
PZ101794.1
156,492 bp · 135 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 39123 78246 117369 156492 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19 rpl22 rps3 rpl14 rps8
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
136 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 419 1477 1059 Locate
trnK-UUU gene − 1704 4293 2590 Locate
matK gene − 2018 3562 1545 Locate
rps16 gene − 4822 5955 1134 Locate
trnQ-UUG gene − 6992 7063 72 Locate
psbK gene + 7451 7645 195 Locate
psbI gene + 8012 8122 111 Locate
trnS-GCU gene − 8307 8394 88 Locate
trnG-UCC gene + 9089 9835 747 Locate
trnR-UCU gene + 10029 10100 72 Locate
atpA gene − 10205 11728 1524 Locate
atpF gene − 11829 13074 1246 Locate
atpH gene − 13353 13598 246 Locate
atpI gene − 14626 15369 744 Locate
rps2 gene − 15599 16309 711 Locate
rpoC2 gene − 16520 20716 4197 Locate
rpoC1 gene − 20881 23702 2822 Locate
rpoB gene − 23729 26941 3213 Locate
trnC-GCA gene + 28111 28181 71 Locate
petN gene + 28343 28438 96 Locate
psbM gene − 29470 29574 105 Locate
trnD-GUC gene − 30103 30176 74 Locate
trnY-GUA gene − 30287 30370 84 Locate
trnE-UUC gene − 30443 30515 73 Locate
trnT-GGU gene + 31094 31165 72 Locate
psbD gene + 32472 33533 1062 Locate
psbC gene + 33481 34902 1422 Locate
trnS-UGA gene − 35150 35231 82 Locate
psbZ gene + 35579 35767 189 Locate
trnG-GCC gene + 36044 36114 71 Locate
trnfM-CAU gene − 36288 36361 74 Locate
rps14 gene − 36511 36813 303 Locate
psaB gene − 36935 39139 2205 Locate
psaA gene − 39165 41417 2253 Locate
ycf3 gene − 42079 44034 1956 Locate
trnS-GGA gene + 44870 44956 87 Locate
rps4 gene − 45176 45781 606 Locate
trnT-UGU gene − 46255 46327 73 Locate
trnL-UAA gene + 47018 47593 576 Locate
trnF-GAA gene + 47901 47973 73 Locate
ndhJ gene − 48658 49134 477 Locate
ndhK gene − 49245 49922 678 Locate
ndhC gene − 49974 50336 363 Locate
trnV-UAC gene − 51330 51972 643 Locate
trnM-CAU gene + 52152 52224 73 Locate
atpE gene − 52439 52840 402 Locate
atpB gene − 52837 54333 1497 Locate
rbcL gene + 55126 56586 1461 Locate
accD gene + 57278 58759 1482 Locate
psaI gene + 59476 59586 111 Locate
ycf4 gene + 60031 60585 555 Locate
cemA gene + 61240 61929 690 Locate
petA gene + 62157 63119 963 Locate
psbJ gene − 64176 64298 123 Locate
psbL gene − 64433 64549 117 Locate
psbF gene − 64573 64692 120 Locate
psbE gene − 64707 64958 252 Locate
petL gene + 65815 65910 96 Locate
petG gene + 66086 66199 114 Locate
trnW-CCA gene − 66326 66399 74 Locate
trnP-UGG gene − 66573 66646 74 Locate
psaJ gene + 66933 67067 135 Locate
rpl33 gene + 67509 67709 201 Locate
rps18 gene + 67894 68199 306 Locate
rpl20 gene − 68431 68817 387 Locate
rps12 gene − 69628 69753 126 Locate
clpP gene − 69872 71786 1915 Locate
psbB gene + 72242 73768 1527 Locate
psbT gene + 73941 74042 102 Locate
psbN gene − 74105 74236 132 Locate
psbH gene + 74342 74563 222 Locate
petB gene + 74689 76052 1364 Locate
petD gene + 76241 77439 1199 Locate
rpoA gene − 77616 78623 1008 Locate
rps11 gene − 78694 79110 417 Locate
rpl36 gene − 79220 79333 114 Locate
infA gene − 79451 79684 234 Locate
rps8 gene − 79810 80214 405 Locate
rpl14 gene − 80387 80755 369 Locate
rpl16 gene − 80887 82160 1274 Locate
rps3 gene − 82303 82965 663 Locate
rpl22 gene − 82950 83417 468 Locate
rps19 gene − 83482 83760 279 Locate
rpl2 gene − 83827 85315 1489 Locate
rpl23 gene − 85339 85620 282 Locate
trnI-CAU gene − 85786 85859 74 Locate
ycf2 gene + 85948 92751 6804 Locate
trnL-CAA gene − 93354 93434 81 Locate
ndhB gene − 94009 96153 2145 Locate
rps7 gene − 96472 96939 468 Locate
rps12 gene − 96993 97783 791 Locate
trnV-GAC gene + 99378 99449 72 Locate
rrn16 gene + 99676 101166 1491 Locate
trnI-GAU gene + 101465 102485 1021 Locate
trnA-UGC gene + 102550 103440 891 Locate
rrn23 gene + 103618 106427 2810 Locate
rrn4.5 gene + 106527 106629 103 Locate
rrn5 gene + 106890 107010 121 Locate
trnR-ACG gene + 107254 107327 74 Locate
trnN-GUU gene − 107888 107959 72 Locate
ndhF gene − 109313 111544 2232 Locate
rpl32 gene + 111958 112128 171 Locate
trnL-UAG gene + 112802 112881 80 Locate
ccsA gene + 112974 113933 960 Locate
ndhD gene − 114197 115726 1530 Locate
psaC gene − 115825 116070 246 Locate
ndhE gene − 116320 116625 306 Locate
ndhG gene − 116848 117378 531 Locate
ndhI gene − 117747 118238 492 Locate
ndhA gene − 118319 120452 2134 Locate
ndhH gene − 120454 121665 1212 Locate
rps15 gene − 121735 122007 273 Locate
ycf1 gene − 122409 128069 5661 Locate
trnN-GUU gene + 128288 128359 72 Locate
trnR-ACG gene − 128920 128993 74 Locate
rrn5 gene − 129237 129357 121 Locate
rrn4.5 gene − 129618 129720 103 Locate
rrn23 gene − 129820 132629 2810 Locate
trnA-UGC gene − 132807 133697 891 Locate
trnI-GAU gene − 133762 134782 1021 Locate
rrn16 gene − 135081 136571 1491 Locate
trnV-GAC gene − 136798 136869 72 Locate
rps12 gene + 138464 139254 791 Locate
rps7 gene + 139308 139775 468 Locate
ndhB gene + 140094 142238 2145 Locate
trnL-CAA gene + 142813 142893 81 Locate
ycf2 gene − 143496 150299 6804 Locate
trnI-CAU gene + 150388 150461 74 Locate
rpl23 gene + 150627 150908 282 Locate
rpl2 gene + 150932 152420 1489 Locate
rps19 gene + 152487 152765 279 Locate
rpl22 gene + 152830 153297 468 Locate
rps3 gene + 153282 153944 663 Locate
rpl14 gene + 155492 155860 369 Locate
rps8 gene + 156033 156437 405 Locate
Status Available
Accession PZ101794.1
Length 156,492 bp
GC content 37.7%
Annotated genes 135
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 12 Ribosomal Protein 31 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 58
Direct 22
Inverted 10
Palindromic 9
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources