Nepeta cataria chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_051544.1 · 14–88 bp · −
psbA · NC_051544.1 · 384–1,442 bp · −
trnK-UUU · NC_051544.1 · 1,674–4,250 bp · −
matK · NC_051544.1 · 1,999–3,519 bp · −
rps16 · NC_051544.1 · 4,788–5,921 bp · −
trnQ-UUG · NC_051544.1 · 6,835–6,906 bp · −
trnS-GCU · NC_051544.1 · 8,109–8,196 bp · −
atpA · NC_051544.1 · 10,054–11,577 bp · −
atpF · NC_051544.1 · 11,686–12,925 bp · −
atpH · NC_051544.1 · 13,214–13,459 bp · −
atpI · NC_051544.1 · 14,470–15,213 bp · −
rps2 · NC_051544.1 · 15,439–16,149 bp · −
rpoC2 · NC_051544.1 · 16,366–20,535 bp · −
rpoC1 · NC_051544.1 · 20,700–23,550 bp · −
rpoB · NC_051544.1 · 23,556–26,768 bp · −
psbM · NC_051544.1 · 29,286–29,390 bp · −
trnD-GUC · NC_051544.1 · 29,909–29,982 bp · −
trnY-GUA · NC_051544.1 · 30,099–30,182 bp · −
trnE-UUC · NC_051544.1 · 30,253–30,325 bp · −
trnS-UGA · NC_051544.1 · 34,945–35,037 bp · −
trnfM-CAU · NC_051544.1 · 36,036–36,109 bp · −
rps14 · NC_051544.1 · 36,254–36,556 bp · −
psaB · NC_051544.1 · 36,679–38,883 bp · −
psaA · NC_051544.1 · 38,909–41,161 bp · −
ycf3 · NC_051544.1 · 41,960–43,926 bp · −
rps4 · NC_051544.1 · 45,147–45,752 bp · −
trnT-UGU · NC_051544.1 · 46,140–46,212 bp · −
ndhJ · NC_051544.1 · 48,492–48,968 bp · −
ndhK · NC_051544.1 · 49,079–49,756 bp · −
ndhC · NC_051544.1 · 49,808–50,170 bp · −
trnV-UAC · NC_051544.1 · 51,096–51,747 bp · −
atpE · NC_051544.1 · 52,191–52,592 bp · −
atpB · NC_051544.1 · 52,589–54,085 bp · −
psbJ · NC_051544.1 · 63,854–63,976 bp · −
psbL · NC_051544.1 · 64,111–64,227 bp · −
psbF · NC_051544.1 · 64,251–64,370 bp · −
psbE · NC_051544.1 · 64,385–64,636 bp · −
trnW-CCA · NC_051544.1 · 66,018–66,091 bp · −
trnP-UGG · NC_051544.1 · 66,259–66,332 bp · −
rpl20 · NC_051544.1 · 68,086–68,472 bp · −
rps12 · NC_051544.1 · 69,188–69,313 bp · −
rps12 · NC_051544.1 · 97,171–97,402 bp · −
rps12 · NC_051544.1 · 96,609–96,634 bp · −
clpP · NC_051544.1 · 69,454–71,370 bp · −
psbN · NC_051544.1 · 73,709–73,840 bp · −
rpoA · NC_051544.1 · 77,241–78,248 bp · −
rps11 · NC_051544.1 · 78,318–78,734 bp · −
rpl36 · NC_051544.1 · 78,844–78,957 bp · −
infA · NC_051544.1 · 79,053–79,286 bp · −
rps8 · NC_051544.1 · 79,417–79,821 bp · −
rpl14 · NC_051544.1 · 79,992–80,360 bp · −
rpl16 · NC_051544.1 · 80,492–81,757 bp · −
rps3 · NC_051544.1 · 81,901–82,563 bp · −
rpl22 · NC_051544.1 · 82,548–83,021 bp · −
rps19 · NC_051544.1 · 83,103–83,381 bp · −
rpl2 · NC_051544.1 · 83,448–84,926 bp · −
rpl23 · NC_051544.1 · 84,945–85,226 bp · −
trnI-CAU · NC_051544.1 · 85,392–85,465 bp · −
trnL-CAA · NC_051544.1 · 92,975–93,055 bp · −
ndhB · NC_051544.1 · 93,627–95,834 bp · −
rps7 · NC_051544.1 · 96,088–96,555 bp · −
trnN-GUU · NC_051544.1 · 107,547–107,618 bp · −
ndhF · NC_051544.1 · 108,984–111,215 bp · −
ndhD · NC_051544.1 · 113,956–115,485 bp · −
psaC · NC_051544.1 · 115,576–115,821 bp · −
ndhE · NC_051544.1 · 116,082–116,387 bp · −
ndhG · NC_051544.1 · 116,596–117,126 bp · −
ndhI · NC_051544.1 · 117,489–117,995 bp · −
ndhA · NC_051544.1 · 118,076–120,173 bp · −
ndhH · NC_051544.1 · 120,175–121,356 bp · −
rps15 · NC_051544.1 · 121,471–121,743 bp · −
ycf1 · NC_051544.1 · 122,186–127,720 bp · −
trnR-ACG · NC_051544.1 · 128,706–128,779 bp · −
rrn5 · NC_051544.1 · 129,023–129,143 bp · −
rrn4.5 · NC_051544.1 · 129,399–129,501 bp · −
rrn23 · NC_051544.1 · 129,600–132,410 bp · −
trnA-UGC · NC_051544.1 · 132,575–133,453 bp · −
trnI-GAU · NC_051544.1 · 133,518–134,535 bp · −
rrn16 · NC_051544.1 · 134,833–136,323 bp · −
trnV-GAC · NC_051544.1 · 136,544–136,615 bp · −
ycf15 · NC_051544.1 · 142,960–143,208 bp · −
ycf2 · NC_051544.1 · 143,299–150,120 bp · −
psbK · NC_051544.1 · 7,271–7,450 bp · +
psbI · NC_051544.1 · 7,840–7,950 bp · +
trnG-UCC · NC_051544.1 · 8,935–9,694 bp · +
trnR-UCU · NC_051544.1 · 9,879–9,950 bp · +
trnC-GCA · NC_051544.1 · 27,976–28,046 bp · +
petN · NC_051544.1 · 28,209–28,298 bp · +
trnT-GGU · NC_051544.1 · 30,946–31,017 bp · +
psbD · NC_051544.1 · 32,278–33,339 bp · +
psbC · NC_051544.1 · 33,287–34,708 bp · +
psbZ · NC_051544.1 · 35,371–35,559 bp · +
trnG-GCC · NC_051544.1 · 35,804–35,874 bp · +
trnS-GGA · NC_051544.1 · 44,766–44,852 bp · +
trnL-UAA · NC_051544.1 · 46,904–47,462 bp · +
trnF-GAA · NC_051544.1 · 47,745–47,817 bp · +
trnM-CAU · NC_051544.1 · 51,928–52,000 bp · +
rbcL · NC_051544.1 · 54,870–56,303 bp · +
accD · NC_051544.1 · 56,996–58,477 bp · +
psaI · NC_051544.1 · 59,189–59,299 bp · +
ycf4 · NC_051544.1 · 59,746–60,300 bp · +
cemA · NC_051544.1 · 60,948–61,637 bp · +
petA · NC_051544.1 · 61,845–62,807 bp · +
petL · NC_051544.1 · 65,518–65,613 bp · +
petG · NC_051544.1 · 65,782–65,895 bp · +
psaJ · NC_051544.1 · 66,614–66,748 bp · +
rpl33 · NC_051544.1 · 67,192–67,392 bp · +
rps18 · NC_051544.1 · 67,553–67,858 bp · +
rps12 · NC_051544.1 · 138,278–138,509 bp · +
rps12 · NC_051544.1 · 139,046–139,071 bp · +
psbB · NC_051544.1 · 71,828–73,354 bp · +
psbT · NC_051544.1 · 73,542–73,643 bp · +
psbH · NC_051544.1 · 73,946–74,164 bp · +
petB · NC_051544.1 · 74,299–75,668 bp · +
petD · NC_051544.1 · 75,857–77,069 bp · +
ycf2 · NC_051544.1 · 85,560–92,381 bp · +
ycf15 · NC_051544.1 · 92,472–92,720 bp · +
trnV-GAC · NC_051544.1 · 99,065–99,136 bp · +
rrn16 · NC_051544.1 · 99,357–100,847 bp · +
trnI-GAU · NC_051544.1 · 101,145–102,162 bp · +
trnA-UGC · NC_051544.1 · 102,227–103,105 bp · +
rrn23 · NC_051544.1 · 103,270–106,080 bp · +
rrn4.5 · NC_051544.1 · 106,179–106,281 bp · +
rrn5 · NC_051544.1 · 106,537–106,657 bp · +
trnR-ACG · NC_051544.1 · 106,901–106,974 bp · +
rpl32 · NC_051544.1 · 111,693–111,863 bp · +
trnL-UAG · NC_051544.1 · 112,590–112,669 bp · +
ccsA · NC_051544.1 · 112,759–113,730 bp · +
trnN-GUU · NC_051544.1 · 128,062–128,133 bp · +
rps7 · NC_051544.1 · 139,125–139,592 bp · +
ndhB · NC_051544.1 · 139,846–142,053 bp · +
trnL-CAA · NC_051544.1 · 142,625–142,705 bp · +
trnI-CAU · NC_051544.1 · 150,215–150,288 bp · +
rpl23 · NC_051544.1 · 150,454–150,735 bp · +
rpl2 · NC_051544.1 · 150,754–152,232 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Nepeta cataria
ANNOTATED PLASTOME
NC_051544.1
152,339 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38085 76170 114254 152339 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 14 88 75 Locate
psbA gene − 384 1442 1059 Locate
trnK-UUU gene − 1674 4250 2577 Locate
matK gene − 1999 3519 1521 Locate
rps16 gene − 4788 5921 1134 Locate
trnQ-UUG gene − 6835 6906 72 Locate
psbK gene + 7271 7450 180 Locate
psbI gene + 7840 7950 111 Locate
trnS-GCU gene − 8109 8196 88 Locate
trnG-UCC gene + 8935 9694 760 Locate
trnR-UCU gene + 9879 9950 72 Locate
atpA gene − 10054 11577 1524 Locate
atpF gene − 11686 12925 1240 Locate
atpH gene − 13214 13459 246 Locate
atpI gene − 14470 15213 744 Locate
rps2 gene − 15439 16149 711 Locate
rpoC2 gene − 16366 20535 4170 Locate
rpoC1 gene − 20700 23550 2851 Locate
rpoB gene − 23556 26768 3213 Locate
trnC-GCA gene + 27976 28046 71 Locate
petN gene + 28209 28298 90 Locate
psbM gene − 29286 29390 105 Locate
trnD-GUC gene − 29909 29982 74 Locate
trnY-GUA gene − 30099 30182 84 Locate
trnE-UUC gene − 30253 30325 73 Locate
trnT-GGU gene + 30946 31017 72 Locate
psbD gene + 32278 33339 1062 Locate
psbC gene + 33287 34708 1422 Locate
trnS-UGA gene − 34945 35037 93 Locate
psbZ gene + 35371 35559 189 Locate
trnG-GCC gene + 35804 35874 71 Locate
trnfM-CAU gene − 36036 36109 74 Locate
rps14 gene − 36254 36556 303 Locate
psaB gene − 36679 38883 2205 Locate
psaA gene − 38909 41161 2253 Locate
ycf3 gene − 41960 43926 1967 Locate
trnS-GGA gene + 44766 44852 87 Locate
rps4 gene − 45147 45752 606 Locate
trnT-UGU gene − 46140 46212 73 Locate
trnL-UAA gene + 46904 47462 559 Locate
trnF-GAA gene + 47745 47817 73 Locate
ndhJ gene − 48492 48968 477 Locate
ndhK gene − 49079 49756 678 Locate
ndhC gene − 49808 50170 363 Locate
trnV-UAC gene − 51096 51747 652 Locate
trnM-CAU gene + 51928 52000 73 Locate
atpE gene − 52191 52592 402 Locate
atpB gene − 52589 54085 1497 Locate
rbcL gene + 54870 56303 1434 Locate
accD gene + 56996 58477 1482 Locate
psaI gene + 59189 59299 111 Locate
ycf4 gene + 59746 60300 555 Locate
cemA gene + 60948 61637 690 Locate
petA gene + 61845 62807 963 Locate
psbJ gene − 63854 63976 123 Locate
psbL gene − 64111 64227 117 Locate
psbF gene − 64251 64370 120 Locate
psbE gene − 64385 64636 252 Locate
petL gene + 65518 65613 96 Locate
petG gene + 65782 65895 114 Locate
trnW-CCA gene − 66018 66091 74 Locate
trnP-UGG gene − 66259 66332 74 Locate
psaJ gene + 66614 66748 135 Locate
rpl33 gene + 67192 67392 201 Locate
rps18 gene + 67553 67858 306 Locate
rpl20 gene − 68086 68472 387 Locate
rps12 gene − 69188 69313 126 Locate
clpP gene − 69454 71370 1917 Locate
psbB gene + 71828 73354 1527 Locate
psbT gene + 73542 73643 102 Locate
psbN gene − 73709 73840 132 Locate
psbH gene + 73946 74164 219 Locate
petB gene + 74299 75668 1370 Locate
petD gene + 75857 77069 1213 Locate
rpoA gene − 77241 78248 1008 Locate
rps11 gene − 78318 78734 417 Locate
rpl36 gene − 78844 78957 114 Locate
infA gene − 79053 79286 234 Locate
rps8 gene − 79417 79821 405 Locate
rpl14 gene − 79992 80360 369 Locate
rpl16 gene − 80492 81757 1266 Locate
rps3 gene − 81901 82563 663 Locate
rpl22 gene − 82548 83021 474 Locate
rps19 gene − 83103 83381 279 Locate
rpl2 gene − 83448 84926 1479 Locate
rpl23 gene − 84945 85226 282 Locate
trnI-CAU gene − 85392 85465 74 Locate
ycf2 gene + 85560 92381 6822 Locate
ycf15 gene + 92472 92720 249 Locate
trnL-CAA gene − 92975 93055 81 Locate
ndhB gene − 93627 95834 2208 Locate
rps7 gene − 96088 96555 468 Locate
rps12 gene − 96609 96634 26 Locate
rps12 gene − 97171 97402 232 Locate
trnV-GAC gene + 99065 99136 72 Locate
rrn16 gene + 99357 100847 1491 Locate
trnI-GAU gene + 101145 102162 1018 Locate
trnA-UGC gene + 102227 103105 879 Locate
rrn23 gene + 103270 106080 2811 Locate
rrn4.5 gene + 106179 106281 103 Locate
rrn5 gene + 106537 106657 121 Locate
trnR-ACG gene + 106901 106974 74 Locate
trnN-GUU gene − 107547 107618 72 Locate
ndhF gene − 108984 111215 2232 Locate
rpl32 gene + 111693 111863 171 Locate
trnL-UAG gene + 112590 112669 80 Locate
ccsA gene + 112759 113730 972 Locate
ndhD gene − 113956 115485 1530 Locate
psaC gene − 115576 115821 246 Locate
ndhE gene − 116082 116387 306 Locate
ndhG gene − 116596 117126 531 Locate
ndhI gene − 117489 117995 507 Locate
ndhA gene − 118076 120173 2098 Locate
ndhH gene − 120175 121356 1182 Locate
rps15 gene − 121471 121743 273 Locate
ycf1 gene − 122186 127720 5535 Locate
trnN-GUU gene + 128062 128133 72 Locate
trnR-ACG gene − 128706 128779 74 Locate
rrn5 gene − 129023 129143 121 Locate
rrn4.5 gene − 129399 129501 103 Locate
rrn23 gene − 129600 132410 2811 Locate
trnA-UGC gene − 132575 133453 879 Locate
trnI-GAU gene − 133518 134535 1018 Locate
rrn16 gene − 134833 136323 1491 Locate
trnV-GAC gene − 136544 136615 72 Locate
rps12 gene + 138278 138509 232 Locate
rps12 gene + 139046 139071 26 Locate
rps7 gene + 139125 139592 468 Locate
ndhB gene + 139846 142053 2208 Locate
trnL-CAA gene + 142625 142705 81 Locate
ycf15 gene − 142960 143208 249 Locate
ycf2 gene − 143299 150120 6822 Locate
trnI-CAU gene + 150215 150288 74 Locate
rpl23 gene + 150454 150735 282 Locate
rpl2 gene + 150754 152232 1479 Locate
Status Available
Accession NC_051544.1
Length 152,339 bp
GC content 37.9%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 28 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources