Nepeta dentata chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_071848.1 · 9–83 bp · −
psbA · NC_071848.1 · 401–1,459 bp · −
trnK-UUU · NC_071848.1 · 1,712–4,288 bp · −
matK · NC_071848.1 · 2,020–3,549 bp · −
rps16 · NC_071848.1 · 4,727–5,857 bp · −
trnQ-UUG · NC_071848.1 · 6,883–6,954 bp · −
trnS-GCU · NC_071848.1 · 8,174–8,261 bp · −
atpA · NC_071848.1 · 10,121–11,644 bp · −
atpF · NC_071848.1 · 11,739–12,993 bp · −
atpH · NC_071848.1 · 13,262–13,507 bp · −
atpI · NC_071848.1 · 14,501–15,244 bp · −
rps2 · NC_071848.1 · 15,467–16,177 bp · −
rpoC2 · NC_071848.1 · 16,390–20,580 bp · −
rpoC1 · NC_071848.1 · 20,742–23,617 bp · −
rpoB · NC_071848.1 · 23,623–26,835 bp · −
psbM · NC_071848.1 · 29,328–29,432 bp · −
trnD-GUC · NC_071848.1 · 29,951–30,024 bp · −
trnY-GUA · NC_071848.1 · 30,135–30,218 bp · −
trnE-UUC · NC_071848.1 · 30,297–30,369 bp · −
trnS-UGA · NC_071848.1 · 35,030–35,122 bp · −
trnfM-CAU · NC_071848.1 · 36,175–36,248 bp · −
rps14 · NC_071848.1 · 36,398–36,700 bp · −
psaB · NC_071848.1 · 36,822–39,026 bp · −
psaA · NC_071848.1 · 39,052–41,304 bp · −
ycf3 · NC_071848.1 · 42,063–44,001 bp · −
rps4 · NC_071848.1 · 45,231–45,836 bp · −
trnT-UGU · NC_071848.1 · 46,178–46,250 bp · −
ndhJ · NC_071848.1 · 48,538–49,014 bp · −
ndhK · NC_071848.1 · 49,130–49,807 bp · −
ndhC · NC_071848.1 · 49,859–50,221 bp · −
trnV-UAC · NC_071848.1 · 51,169–51,823 bp · −
atpE · NC_071848.1 · 52,282–52,683 bp · −
atpB · NC_071848.1 · 52,680–54,176 bp · −
psbJ · NC_071848.1 · 63,742–63,864 bp · −
psbL · NC_071848.1 · 63,994–64,110 bp · −
psbF · NC_071848.1 · 64,134–64,253 bp · −
psbE · NC_071848.1 · 64,268–64,519 bp · −
trnW-CCA · NC_071848.1 · 65,901–65,974 bp · −
trnP-UGG · NC_071848.1 · 66,148–66,221 bp · −
rpl20 · NC_071848.1 · 67,994–68,380 bp · −
rps12 · NC_071848.1 · 69,168–69,293 bp · −
rps12 · NC_071848.1 · 96,527–97,320 bp · −
clpP · NC_071848.1 · 69,417–71,326 bp · −
psbN · NC_071848.1 · 73,640–73,771 bp · −
rpoA · NC_071848.1 · 77,152–78,159 bp · −
rps11 · NC_071848.1 · 78,231–78,647 bp · −
rpl36 · NC_071848.1 · 78,747–78,860 bp · −
infA · NC_071848.1 · 78,956–79,189 bp · −
rps8 · NC_071848.1 · 79,318–79,722 bp · −
rpl14 · NC_071848.1 · 79,904–80,272 bp · −
rpl16 · NC_071848.1 · 80,404–81,700 bp · −
rps3 · NC_071848.1 · 81,841–82,503 bp · −
rpl22 · NC_071848.1 · 82,488–82,955 bp · −
rps19 · NC_071848.1 · 83,025–83,303 bp · −
rpl2 · NC_071848.1 · 83,364–84,853 bp · −
rpl23 · NC_071848.1 · 84,872–85,153 bp · −
trnI-CAU · NC_071848.1 · 85,319–85,392 bp · −
trnL-CAA · NC_071848.1 · 92,903–92,983 bp · −
ndhB · NC_071848.1 · 93,551–95,751 bp · −
rps7 · NC_071848.1 · 96,006–96,473 bp · −
trnN-GUU · NC_071848.1 · 107,416–107,487 bp · −
ndhF · NC_071848.1 · 108,841–111,072 bp · −
ndhD · NC_071848.1 · 113,855–115,384 bp · −
psaC · NC_071848.1 · 115,476–115,721 bp · −
ndhE · NC_071848.1 · 115,990–116,295 bp · −
ndhG · NC_071848.1 · 116,518–117,048 bp · −
ndhI · NC_071848.1 · 117,154–117,660 bp · −
ndhA · NC_071848.1 · 117,741–119,852 bp · −
ndhH · NC_071848.1 · 119,854–121,041 bp · −
rps15 · NC_071848.1 · 121,148–121,420 bp · −
ycf1 · NC_071848.1 · 121,795–127,335 bp · −
trnR-ACG · NC_071848.1 · 128,263–128,336 bp · −
rrn5 · NC_071848.1 · 128,580–128,700 bp · −
rrn4.5 · NC_071848.1 · 128,961–129,063 bp · −
rrn23 · NC_071848.1 · 129,162–131,972 bp · −
trnA-UGC · NC_071848.1 · 132,138–133,016 bp · −
trnI-GAU · NC_071848.1 · 133,086–134,099 bp · −
rrn16 · NC_071848.1 · 134,398–135,888 bp · −
trnV-GAC · NC_071848.1 · 136,115–136,186 bp · −
ycf15 · NC_071848.1 · 142,505–142,753 bp · −
ycf2 · NC_071848.1 · 142,844–149,671 bp · −
psbK · NC_071848.1 · 7,343–7,528 bp · +
psbI · NC_071848.1 · 7,902–8,012 bp · +
trnG-UCC · NC_071848.1 · 9,001–9,750 bp · +
trnR-UCU · NC_071848.1 · 9,944–10,015 bp · +
trnC-GCA · NC_071848.1 · 27,998–28,068 bp · +
petN · NC_071848.1 · 28,229–28,318 bp · +
trnT-GGU · NC_071848.1 · 30,908–30,979 bp · +
psbD · NC_071848.1 · 32,351–33,412 bp · +
psbC · NC_071848.1 · 33,360–34,781 bp · +
psbZ · NC_071848.1 · 35,467–35,655 bp · +
trnG-GCC · NC_071848.1 · 35,943–36,013 bp · +
trnS-GGA · NC_071848.1 · 44,862–44,948 bp · +
trnL-UAA · NC_071848.1 · 46,976–47,535 bp · +
trnF-GAA · NC_071848.1 · 47,825–47,897 bp · +
trnM-CAU · NC_071848.1 · 52,004–52,076 bp · +
rbcL · NC_071848.1 · 54,980–56,413 bp · +
accD · NC_071848.1 · 57,111–58,592 bp · +
psaI · NC_071848.1 · 59,076–59,186 bp · +
ycf4 · NC_071848.1 · 59,623–60,177 bp · +
cemA · NC_071848.1 · 60,840–61,529 bp · +
petA · NC_071848.1 · 61,756–62,718 bp · +
petL · NC_071848.1 · 65,400–65,495 bp · +
petG · NC_071848.1 · 65,672–65,785 bp · +
psaJ · NC_071848.1 · 66,501–66,635 bp · +
rpl33 · NC_071848.1 · 67,082–67,282 bp · +
rps18 · NC_071848.1 · 67,454–67,759 bp · +
rps12 · NC_071848.1 · 137,832–138,625 bp · +
psbB · NC_071848.1 · 71,764–73,290 bp · +
psbT · NC_071848.1 · 73,472–73,579 bp · +
psbH · NC_071848.1 · 73,877–74,098 bp · +
petB · NC_071848.1 · 74,229–75,595 bp · +
petD · NC_071848.1 · 75,783–76,974 bp · +
ycf2 · NC_071848.1 · 85,481–92,308 bp · +
ycf15 · NC_071848.1 · 92,399–92,647 bp · +
trnV-GAC · NC_071848.1 · 98,966–99,037 bp · +
rrn16 · NC_071848.1 · 99,264–100,754 bp · +
trnI-GAU · NC_071848.1 · 101,053–102,066 bp · +
trnA-UGC · NC_071848.1 · 102,136–103,014 bp · +
rrn23 · NC_071848.1 · 103,180–105,990 bp · +
rrn4.5 · NC_071848.1 · 106,089–106,191 bp · +
rrn5 · NC_071848.1 · 106,452–106,572 bp · +
trnR-ACG · NC_071848.1 · 106,816–106,889 bp · +
ycf1 · NC_071848.1 · 107,817–108,947 bp · +
rpl32 · NC_071848.1 · 111,540–111,710 bp · +
trnL-UAG · NC_071848.1 · 112,451–112,530 bp · +
ccsA · NC_071848.1 · 112,631–113,608 bp · +
trnN-GUU · NC_071848.1 · 127,665–127,736 bp · +
rps7 · NC_071848.1 · 138,679–139,146 bp · +
ndhB · NC_071848.1 · 139,401–141,601 bp · +
trnL-CAA · NC_071848.1 · 142,169–142,249 bp · +
trnI-CAU · NC_071848.1 · 149,760–149,833 bp · +
rpl23 · NC_071848.1 · 149,999–150,280 bp · +
rpl2 · NC_071848.1 · 150,299–151,788 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Nepeta dentata
ANNOTATED PLASTOME
NC_071848.1
151,893 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37973 75946 113920 151893 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 9 83 75 Locate
psbA gene − 401 1459 1059 Locate
trnK-UUU gene − 1712 4288 2577 Locate
matK gene − 2020 3549 1530 Locate
rps16 gene − 4727 5857 1131 Locate
trnQ-UUG gene − 6883 6954 72 Locate
psbK gene + 7343 7528 186 Locate
psbI gene + 7902 8012 111 Locate
trnS-GCU gene − 8174 8261 88 Locate
trnG-UCC gene + 9001 9750 750 Locate
trnR-UCU gene + 9944 10015 72 Locate
atpA gene − 10121 11644 1524 Locate
atpF gene − 11739 12993 1255 Locate
atpH gene − 13262 13507 246 Locate
atpI gene − 14501 15244 744 Locate
rps2 gene − 15467 16177 711 Locate
rpoC2 gene − 16390 20580 4191 Locate
rpoC1 gene − 20742 23617 2876 Locate
rpoB gene − 23623 26835 3213 Locate
trnC-GCA gene + 27998 28068 71 Locate
petN gene + 28229 28318 90 Locate
psbM gene − 29328 29432 105 Locate
trnD-GUC gene − 29951 30024 74 Locate
trnY-GUA gene − 30135 30218 84 Locate
trnE-UUC gene − 30297 30369 73 Locate
trnT-GGU gene + 30908 30979 72 Locate
psbD gene + 32351 33412 1062 Locate
psbC gene + 33360 34781 1422 Locate
trnS-UGA gene − 35030 35122 93 Locate
psbZ gene + 35467 35655 189 Locate
trnG-GCC gene + 35943 36013 71 Locate
trnfM-CAU gene − 36175 36248 74 Locate
rps14 gene − 36398 36700 303 Locate
psaB gene − 36822 39026 2205 Locate
psaA gene − 39052 41304 2253 Locate
ycf3 gene − 42063 44001 1939 Locate
trnS-GGA gene + 44862 44948 87 Locate
rps4 gene − 45231 45836 606 Locate
trnT-UGU gene − 46178 46250 73 Locate
trnL-UAA gene + 46976 47535 560 Locate
trnF-GAA gene + 47825 47897 73 Locate
ndhJ gene − 48538 49014 477 Locate
ndhK gene − 49130 49807 678 Locate
ndhC gene − 49859 50221 363 Locate
trnV-UAC gene − 51169 51823 655 Locate
trnM-CAU gene + 52004 52076 73 Locate
atpE gene − 52282 52683 402 Locate
atpB gene − 52680 54176 1497 Locate
rbcL gene + 54980 56413 1434 Locate
accD gene + 57111 58592 1482 Locate
psaI gene + 59076 59186 111 Locate
ycf4 gene + 59623 60177 555 Locate
cemA gene + 60840 61529 690 Locate
petA gene + 61756 62718 963 Locate
psbJ gene − 63742 63864 123 Locate
psbL gene − 63994 64110 117 Locate
psbF gene − 64134 64253 120 Locate
psbE gene − 64268 64519 252 Locate
petL gene + 65400 65495 96 Locate
petG gene + 65672 65785 114 Locate
trnW-CCA gene − 65901 65974 74 Locate
trnP-UGG gene − 66148 66221 74 Locate
psaJ gene + 66501 66635 135 Locate
rpl33 gene + 67082 67282 201 Locate
rps18 gene + 67454 67759 306 Locate
rpl20 gene − 67994 68380 387 Locate
rps12 gene − 69168 69293 126 Locate
clpP gene − 69417 71326 1910 Locate
psbB gene + 71764 73290 1527 Locate
psbT gene + 73472 73579 108 Locate
psbN gene − 73640 73771 132 Locate
psbH gene + 73877 74098 222 Locate
petB gene + 74229 75595 1367 Locate
petD gene + 75783 76974 1192 Locate
rpoA gene − 77152 78159 1008 Locate
rps11 gene − 78231 78647 417 Locate
rpl36 gene − 78747 78860 114 Locate
infA gene − 78956 79189 234 Locate
rps8 gene − 79318 79722 405 Locate
rpl14 gene − 79904 80272 369 Locate
rpl16 gene − 80404 81700 1297 Locate
rps3 gene − 81841 82503 663 Locate
rpl22 gene − 82488 82955 468 Locate
rps19 gene − 83025 83303 279 Locate
rpl2 gene − 83364 84853 1490 Locate
rpl23 gene − 84872 85153 282 Locate
trnI-CAU gene − 85319 85392 74 Locate
ycf2 gene + 85481 92308 6828 Locate
ycf15 gene + 92399 92647 249 Locate
trnL-CAA gene − 92903 92983 81 Locate
ndhB gene − 93551 95751 2201 Locate
rps7 gene − 96006 96473 468 Locate
rps12 gene − 96527 97320 794 Locate
trnV-GAC gene + 98966 99037 72 Locate
rrn16 gene + 99264 100754 1491 Locate
trnI-GAU gene + 101053 102066 1014 Locate
trnA-UGC gene + 102136 103014 879 Locate
rrn23 gene + 103180 105990 2811 Locate
rrn4.5 gene + 106089 106191 103 Locate
rrn5 gene + 106452 106572 121 Locate
trnR-ACG gene + 106816 106889 74 Locate
trnN-GUU gene − 107416 107487 72 Locate
ycf1 gene + 107817 108947 1131 Locate
ndhF gene − 108841 111072 2232 Locate
rpl32 gene + 111540 111710 171 Locate
trnL-UAG gene + 112451 112530 80 Locate
ccsA gene + 112631 113608 978 Locate
ndhD gene − 113855 115384 1530 Locate
psaC gene − 115476 115721 246 Locate
ndhE gene − 115990 116295 306 Locate
ndhG gene − 116518 117048 531 Locate
ndhI gene − 117154 117660 507 Locate
ndhA gene − 117741 119852 2112 Locate
ndhH gene − 119854 121041 1188 Locate
rps15 gene − 121148 121420 273 Locate
ycf1 gene − 121795 127335 5541 Locate
trnN-GUU gene + 127665 127736 72 Locate
trnR-ACG gene − 128263 128336 74 Locate
rrn5 gene − 128580 128700 121 Locate
rrn4.5 gene − 128961 129063 103 Locate
rrn23 gene − 129162 131972 2811 Locate
trnA-UGC gene − 132138 133016 879 Locate
trnI-GAU gene − 133086 134099 1014 Locate
rrn16 gene − 134398 135888 1491 Locate
trnV-GAC gene − 136115 136186 72 Locate
rps12 gene + 137832 138625 794 Locate
rps7 gene + 138679 139146 468 Locate
ndhB gene + 139401 141601 2201 Locate
trnL-CAA gene + 142169 142249 81 Locate
ycf15 gene − 142505 142753 249 Locate
ycf2 gene − 142844 149671 6828 Locate
trnI-CAU gene + 149760 149833 74 Locate
rpl23 gene + 149999 150280 282 Locate
rpl2 gene + 150299 151788 1490 Locate
Status Available
Accession NC_071848.1
Length 151,893 bp
GC content 37.9%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources