Nepeta hemsleyana chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_058882.1 · 11–84 bp · −
psbA · NC_058882.1 · 320–1,378 bp · −
trnK-UUU · NC_058882.1 · 1,610–4,162 bp · −
matK · NC_058882.1 · 1,879–3,426 bp · −
rps16 · NC_058882.1 · 4,682–5,822 bp · −
trnQ-UUG · NC_058882.1 · 6,816–6,887 bp · −
trnS-GCU · NC_058882.1 · 8,121–8,208 bp · −
atpA · NC_058882.1 · 10,037–11,560 bp · −
atpF · NC_058882.1 · 11,658–12,903 bp · −
atpH · NC_058882.1 · 13,170–13,415 bp · −
atpI · NC_058882.1 · 14,447–15,190 bp · −
rps2 · NC_058882.1 · 15,413–16,123 bp · −
rpoC2 · NC_058882.1 · 16,328–20,515 bp · −
rpoC1 · NC_058882.1 · 20,677–23,499 bp · −
rpoB · NC_058882.1 · 23,526–26,738 bp · −
psbM · NC_058882.1 · 29,161–29,265 bp · −
trnD-GUC · NC_058882.1 · 29,793–29,866 bp · −
trnY-GUA · NC_058882.1 · 29,977–30,060 bp · −
trnE-UUC · NC_058882.1 · 30,138–30,210 bp · −
trnS-UGA · NC_058882.1 · 34,859–34,951 bp · −
trnfM-CAU · NC_058882.1 · 36,017–36,090 bp · −
rps14 · NC_058882.1 · 36,235–36,537 bp · −
psaB · NC_058882.1 · 36,660–38,864 bp · −
psaA · NC_058882.1 · 38,890–41,142 bp · −
ycf3 · NC_058882.1 · 41,962–43,916 bp · −
rps4 · NC_058882.1 · 45,123–45,728 bp · −
trnT-UGU · NC_058882.1 · 46,099–46,171 bp · −
ndhJ · NC_058882.1 · 48,440–48,916 bp · −
ndhK · NC_058882.1 · 49,027–49,704 bp · −
ndhC · NC_058882.1 · 49,756–50,118 bp · −
trnV-UAC · NC_058882.1 · 51,057–51,719 bp · −
atpE · NC_058882.1 · 52,184–52,585 bp · −
atpB · NC_058882.1 · 52,582–54,078 bp · −
psbJ · NC_058882.1 · 63,699–63,821 bp · −
psbL · NC_058882.1 · 63,951–64,067 bp · −
psbF · NC_058882.1 · 64,091–64,210 bp · −
psbE · NC_058882.1 · 64,225–64,476 bp · −
trnW-CCA · NC_058882.1 · 65,862–65,935 bp · −
trnP-UGG · NC_058882.1 · 66,109–66,182 bp · −
rpl20 · NC_058882.1 · 67,932–68,318 bp · −
rps12 · NC_058882.1 · 69,117–69,230 bp · −
rps12 · NC_058882.1 · 96,516–97,309 bp · −
clpP · NC_058882.1 · 69,353–71,262 bp · −
psbN · NC_058882.1 · 73,571–73,702 bp · −
rpoA · NC_058882.1 · 77,083–78,090 bp · −
rps11 · NC_058882.1 · 78,162–78,578 bp · −
rpl36 · NC_058882.1 · 78,688–78,801 bp · −
infA · NC_058882.1 · 78,897–79,130 bp · −
rps8 · NC_058882.1 · 79,258–79,662 bp · −
rpl14 · NC_058882.1 · 79,845–80,213 bp · −
rpl16 · NC_058882.1 · 80,352–81,645 bp · −
rps3 · NC_058882.1 · 81,795–82,457 bp · −
rpl22 · NC_058882.1 · 82,442–82,909 bp · −
rps19 · NC_058882.1 · 82,979–83,257 bp · −
rpl2 · NC_058882.1 · 83,319–84,826 bp · −
rpl23 · NC_058882.1 · 84,827–85,108 bp · −
trnI-CAU · NC_058882.1 · 85,274–85,347 bp · −
trnL-CAA · NC_058882.1 · 92,876–92,956 bp · −
ndhB · NC_058882.1 · 93,522–95,675 bp · −
rps7 · NC_058882.1 · 95,995–96,462 bp · −
trnN-GUU · NC_058882.1 · 107,434–107,505 bp · −
ndhF · NC_058882.1 · 108,859–111,090 bp · −
ndhD · NC_058882.1 · 113,827–115,356 bp · −
psaC · NC_058882.1 · 115,448–115,693 bp · −
ndhE · NC_058882.1 · 115,951–116,253 bp · −
ndhG · NC_058882.1 · 116,484–117,014 bp · −
ndhI · NC_058882.1 · 117,379–117,885 bp · −
ndhA · NC_058882.1 · 117,966–120,077 bp · −
ndhH · NC_058882.1 · 120,079–121,320 bp · −
rps15 · NC_058882.1 · 121,366–121,638 bp · −
ycf1 · NC_058882.1 · 122,008–127,662 bp · −
trnR-ACG · NC_058882.1 · 128,518–128,591 bp · −
rrn5 · NC_058882.1 · 128,835–128,955 bp · −
rrn4.5 · NC_058882.1 · 129,216–129,318 bp · −
rrn23 · NC_058882.1 · 129,419–132,227 bp · −
trnA-UGC · NC_058882.1 · 132,393–133,270 bp · −
trnI-GAU · NC_058882.1 · 133,340–134,359 bp · −
rrn16 · NC_058882.1 · 134,658–136,148 bp · −
trnV-GAC · NC_058882.1 · 136,375–136,446 bp · −
ycf2 · NC_058882.1 · 143,105–149,950 bp · −
psbK · NC_058882.1 · 7,284–7,469 bp · +
psbI · NC_058882.1 · 7,854–7,964 bp · +
trnG-UCC · NC_058882.1 · 8,930–9,684 bp · +
trnR-UCU · NC_058882.1 · 9,866–9,937 bp · +
trnC-GCA · NC_058882.1 · 27,888–27,958 bp · +
petN · NC_058882.1 · 28,119–28,208 bp · +
trnT-GGU · NC_058882.1 · 30,763–30,834 bp · +
psbD · NC_058882.1 · 32,186–33,247 bp · +
psbC · NC_058882.1 · 33,195–34,616 bp · +
psbZ · NC_058882.1 · 35,296–35,484 bp · +
trnG-GCC · NC_058882.1 · 35,780–35,850 bp · +
trnS-GGA · NC_058882.1 · 44,754–44,840 bp · +
trnL-UAA · NC_058882.1 · 46,875–47,423 bp · +
trnF-GAA · NC_058882.1 · 47,713–47,785 bp · +
trnM-CAU · NC_058882.1 · 51,900–51,972 bp · +
rbcL · NC_058882.1 · 54,874–56,307 bp · +
accD · NC_058882.1 · 56,949–58,490 bp · +
psaI · NC_058882.1 · 58,973–59,083 bp · +
ycf4 · NC_058882.1 · 59,536–60,090 bp · +
cemA · NC_058882.1 · 60,748–61,437 bp · +
petA · NC_058882.1 · 61,681–62,643 bp · +
petL · NC_058882.1 · 65,359–65,454 bp · +
petG · NC_058882.1 · 65,633–65,746 bp · +
psaJ · NC_058882.1 · 66,463–66,597 bp · +
rpl33 · NC_058882.1 · 67,028–67,228 bp · +
rps18 · NC_058882.1 · 67,411–67,716 bp · +
rps12 · NC_058882.1 · 138,077–138,870 bp · +
psbB · NC_058882.1 · 71,693–73,219 bp · +
psbT · NC_058882.1 · 73,403–73,510 bp · +
psbH · NC_058882.1 · 73,790–74,029 bp · +
petB · NC_058882.1 · 74,151–75,528 bp · +
petD · NC_058882.1 · 75,716–76,900 bp · +
ycf2 · NC_058882.1 · 85,436–92,281 bp · +
trnV-GAC · NC_058882.1 · 98,940–99,011 bp · +
rrn16 · NC_058882.1 · 99,238–100,728 bp · +
trnI-GAU · NC_058882.1 · 101,027–102,046 bp · +
trnA-UGC · NC_058882.1 · 102,116–102,993 bp · +
rrn23 · NC_058882.1 · 103,159–105,967 bp · +
rrn4.5 · NC_058882.1 · 106,068–106,170 bp · +
rrn5 · NC_058882.1 · 106,431–106,551 bp · +
trnR-ACG · NC_058882.1 · 106,795–106,868 bp · +
ycf1 · NC_058882.1 · 107,724–108,905 bp · +
rpl32 · NC_058882.1 · 111,564–111,734 bp · +
trnL-UAG · NC_058882.1 · 112,422–112,501 bp · +
ccsA · NC_058882.1 · 112,596–113,573 bp · +
trnN-GUU · NC_058882.1 · 127,881–127,952 bp · +
rps7 · NC_058882.1 · 138,924–139,391 bp · +
ndhB · NC_058882.1 · 139,711–141,864 bp · +
trnL-CAA · NC_058882.1 · 142,430–142,510 bp · +
trnI-CAU · NC_058882.1 · 150,039–150,112 bp · +
rpl23 · NC_058882.1 · 150,278–150,559 bp · +
rpl2 · NC_058882.1 · 150,560–152,067 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Nepeta hemsleyana
ANNOTATED PLASTOME
NC_058882.1
152,171 bp · 131 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38043 76086 114128 152171 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
132 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 320 1378 1059 Locate
trnK-UUU gene − 1610 4162 2553 Locate
matK gene − 1879 3426 1548 Locate
rps16 gene − 4682 5822 1141 Locate
trnQ-UUG gene − 6816 6887 72 Locate
psbK gene + 7284 7469 186 Locate
psbI gene + 7854 7964 111 Locate
trnS-GCU gene − 8121 8208 88 Locate
trnG-UCC gene + 8930 9684 755 Locate
trnR-UCU gene + 9866 9937 72 Locate
atpA gene − 10037 11560 1524 Locate
atpF gene − 11658 12903 1246 Locate
atpH gene − 13170 13415 246 Locate
atpI gene − 14447 15190 744 Locate
rps2 gene − 15413 16123 711 Locate
rpoC2 gene − 16328 20515 4188 Locate
rpoC1 gene − 20677 23499 2823 Locate
rpoB gene − 23526 26738 3213 Locate
trnC-GCA gene + 27888 27958 71 Locate
petN gene + 28119 28208 90 Locate
psbM gene − 29161 29265 105 Locate
trnD-GUC gene − 29793 29866 74 Locate
trnY-GUA gene − 29977 30060 84 Locate
trnE-UUC gene − 30138 30210 73 Locate
trnT-GGU gene + 30763 30834 72 Locate
psbD gene + 32186 33247 1062 Locate
psbC gene + 33195 34616 1422 Locate
trnS-UGA gene − 34859 34951 93 Locate
psbZ gene + 35296 35484 189 Locate
trnG-GCC gene + 35780 35850 71 Locate
trnfM-CAU gene − 36017 36090 74 Locate
rps14 gene − 36235 36537 303 Locate
psaB gene − 36660 38864 2205 Locate
psaA gene − 38890 41142 2253 Locate
ycf3 gene − 41962 43916 1955 Locate
trnS-GGA gene + 44754 44840 87 Locate
rps4 gene − 45123 45728 606 Locate
trnT-UGU gene − 46099 46171 73 Locate
trnL-UAA gene + 46875 47423 549 Locate
trnF-GAA gene + 47713 47785 73 Locate
ndhJ gene − 48440 48916 477 Locate
ndhK gene − 49027 49704 678 Locate
ndhC gene − 49756 50118 363 Locate
trnV-UAC gene − 51057 51719 663 Locate
trnM-CAU gene + 51900 51972 73 Locate
atpE gene − 52184 52585 402 Locate
atpB gene − 52582 54078 1497 Locate
rbcL gene + 54874 56307 1434 Locate
accD gene + 56949 58490 1542 Locate
psaI gene + 58973 59083 111 Locate
ycf4 gene + 59536 60090 555 Locate
cemA gene + 60748 61437 690 Locate
petA gene + 61681 62643 963 Locate
psbJ gene − 63699 63821 123 Locate
psbL gene − 63951 64067 117 Locate
psbF gene − 64091 64210 120 Locate
psbE gene − 64225 64476 252 Locate
petL gene + 65359 65454 96 Locate
petG gene + 65633 65746 114 Locate
trnW-CCA gene − 65862 65935 74 Locate
trnP-UGG gene − 66109 66182 74 Locate
psaJ gene + 66463 66597 135 Locate
rpl33 gene + 67028 67228 201 Locate
rps18 gene + 67411 67716 306 Locate
rpl20 gene − 67932 68318 387 Locate
rps12 gene − 69117 69230 114 Locate
clpP gene − 69353 71262 1910 Locate
psbB gene + 71693 73219 1527 Locate
psbT gene + 73403 73510 108 Locate
psbN gene − 73571 73702 132 Locate
psbH gene + 73790 74029 240 Locate
petB gene + 74151 75528 1378 Locate
petD gene + 75716 76900 1185 Locate
rpoA gene − 77083 78090 1008 Locate
rps11 gene − 78162 78578 417 Locate
rpl36 gene − 78688 78801 114 Locate
infA gene − 78897 79130 234 Locate
rps8 gene − 79258 79662 405 Locate
rpl14 gene − 79845 80213 369 Locate
rpl16 gene − 80352 81645 1294 Locate
rps3 gene − 81795 82457 663 Locate
rpl22 gene − 82442 82909 468 Locate
rps19 gene − 82979 83257 279 Locate
rpl2 gene − 83319 84826 1508 Locate
rpl23 gene − 84827 85108 282 Locate
trnI-CAU gene − 85274 85347 74 Locate
ycf2 gene + 85436 92281 6846 Locate
trnL-CAA gene − 92876 92956 81 Locate
ndhB gene − 93522 95675 2154 Locate
rps7 gene − 95995 96462 468 Locate
rps12 gene − 96516 97309 794 Locate
trnV-GAC gene + 98940 99011 72 Locate
rrn16 gene + 99238 100728 1491 Locate
trnI-GAU gene + 101027 102046 1020 Locate
trnA-UGC gene + 102116 102993 878 Locate
rrn23 gene + 103159 105967 2809 Locate
rrn4.5 gene + 106068 106170 103 Locate
rrn5 gene + 106431 106551 121 Locate
trnR-ACG gene + 106795 106868 74 Locate
trnN-GUU gene − 107434 107505 72 Locate
ycf1 gene + 107724 108905 1182 Locate
ndhF gene − 108859 111090 2232 Locate
rpl32 gene + 111564 111734 171 Locate
trnL-UAG gene + 112422 112501 80 Locate
ccsA gene + 112596 113573 978 Locate
ndhD gene − 113827 115356 1530 Locate
psaC gene − 115448 115693 246 Locate
ndhE gene − 115951 116253 303 Locate
ndhG gene − 116484 117014 531 Locate
ndhI gene − 117379 117885 507 Locate
ndhA gene − 117966 120077 2112 Locate
ndhH gene − 120079 121320 1242 Locate
rps15 gene − 121366 121638 273 Locate
ycf1 gene − 122008 127662 5655 Locate
trnN-GUU gene + 127881 127952 72 Locate
trnR-ACG gene − 128518 128591 74 Locate
rrn5 gene − 128835 128955 121 Locate
rrn4.5 gene − 129216 129318 103 Locate
rrn23 gene − 129419 132227 2809 Locate
trnA-UGC gene − 132393 133270 878 Locate
trnI-GAU gene − 133340 134359 1020 Locate
rrn16 gene − 134658 136148 1491 Locate
trnV-GAC gene − 136375 136446 72 Locate
rps12 gene + 138077 138870 794 Locate
rps7 gene + 138924 139391 468 Locate
ndhB gene + 139711 141864 2154 Locate
trnL-CAA gene + 142430 142510 81 Locate
ycf2 gene − 143105 149950 6846 Locate
trnI-CAU gene + 150039 150112 74 Locate
rpl23 gene + 150278 150559 282 Locate
rpl2 gene + 150560 152067 1508 Locate
Status Available
Accession NC_058882.1
Length 152,171 bp
GC content 37.9%
Annotated genes 131
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 13 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources