Coordinate-aware organelle record

Nepeta santoana chloroplast genome

Available PV837617.1 151,822 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	450	1509	1059
trnK-UUU	gene	translation-rna	−	1740	4307	2567
matK	gene	other	−	2023	3571	1548
rps16	gene	ribosomal-protein	−	4838	5842	1004
trnQ-UUG	gene	translation-rna	−	6861	6933	72
psbK	gene	photosystem-ii	+	7329	7515	186
psbI	gene	photosystem-ii	+	7898	8009	111
trnS-GCU	gene	translation-rna	−	8181	8269	88
trnG-UCC	gene	translation-rna	+	9001	9761	760
trnR-UCU	gene	translation-rna	+	9942	10014	72
atpA	gene	atp-synthase	−	10113	11637	1524
atpF	gene	atp-synthase	−	11730	12976	1246
atpH	gene	atp-synthase	−	13242	13488	246
atpI	gene	atp-synthase	−	14399	15143	744
rps2	gene	ribosomal-protein	−	15373	16084	711
rpoC2	gene	rna-polymerase	−	16290	20478	4188
rpoC1	gene	rna-polymerase	−	20638	23456	2818
rpoB	gene	rna-polymerase	−	23482	26695	3213
trnC-GCA	gene	translation-rna	+	27851	27922	71
petN	gene	cytochrome	+	28087	28177	90
psbM	gene	photosystem-ii	−	29104	29209	105
trnD-GUC	gene	translation-rna	−	29730	29804	74
trnY-GUA	gene	translation-rna	−	29914	29998	84
trnE-UUC	gene	translation-rna	−	30075	30148	73
trnT-GGU	gene	translation-rna	+	30710	30782	72
psbD	gene	photosystem-ii	+	32175	33237	1062
psbC	gene	photosystem-ii	+	33184	34606	1422
trnS-UGA	gene	translation-rna	−	34849	34941	92
psbZ	gene	photosystem-ii	+	35291	35480	189
trnG-GCC	gene	translation-rna	+	35775	35846	71
trnfM-CAU	gene	translation-rna	−	36010	36084	74
rps14	gene	ribosomal-protein	−	36233	36536	303
psaB	gene	photosystem-i	−	36658	38863	2205
psaA	gene	photosystem-i	−	38888	41141	2253
ycf3	gene	other	−	41988	43935	1947
trnS-GGA	gene	translation-rna	+	44800	44887	87
rps4	gene	ribosomal-protein	−	45167	45773	606
trnT-UGU	gene	translation-rna	−	46166	46239	73
trnL-UAA	gene	translation-rna	+	46947	47476	529
trnF-GAA	gene	translation-rna	+	47765	47838	73
ndhJ	gene	nad-dehydrogenase	−	48483	48960	477
ndhK	gene	nad-dehydrogenase	−	49070	49748	678
ndhC	gene	nad-dehydrogenase	−	49799	50162	363
trnV-UAC	gene	translation-rna	−	51088	51746	658
trnM-CAU	gene	translation-rna	+	51926	51999	73
atpE	gene	atp-synthase	−	52204	52606	402
atpB	gene	atp-synthase	−	52602	54099	1497
rbcL	gene	other	+	54889	56323	1434
accD	gene	other	+	56998	58480	1482
psaI	gene	photosystem-i	+	58955	59066	111
ycf4	gene	other	+	59520	60075	555
cemA	gene	other	+	60749	61439	690
petA	gene	cytochrome	+	61646	62609	963
psbJ	gene	photosystem-ii	−	63537	63660	123
psbL	gene	photosystem-ii	−	63789	63906	117
psbF	gene	photosystem-ii	−	63929	64049	120
psbE	gene	photosystem-ii	−	64063	64315	252
petL	gene	cytochrome	+	65208	65304	96
petG	gene	cytochrome	+	65481	65595	114
trnW-CCA	gene	translation-rna	−	65710	65784	74
trnP-UGG	gene	translation-rna	−	65957	66031	74
psaJ	gene	photosystem-i	+	66328	66463	135
rpl33	gene	ribosomal-protein	+	66903	67104	201
rps18	gene	ribosomal-protein	+	67290	67596	306
rpl20	gene	ribosomal-protein	−	67811	68198	387
rps12	gene	ribosomal-protein	−	68987	97065	28078
clpP	gene	other	−	69225	71126	1901
psbB	gene	photosystem-ii	+	71556	73083	1527
psbT	gene	photosystem-ii	+	73268	73385	117
psbN	gene	photosystem-ii	−	73445	73577	132
psbH	gene	photosystem-ii	+	73682	73904	222
petB	gene	cytochrome	+	74025	75376	1351
petD	gene	cytochrome	+	75563	76748	1185
rpoA	gene	rna-polymerase	−	76930	77938	1008
rps11	gene	ribosomal-protein	−	78009	78426	417
rpl36	gene	ribosomal-protein	−	78543	78657	114
infA	gene	other	−	78752	78986	234
rps8	gene	ribosomal-protein	−	79113	79518	405
rpl14	gene	ribosomal-protein	−	79707	80076	369
rpl16	gene	ribosomal-protein	−	80214	81507	1293
rps3	gene	ribosomal-protein	−	81603	82266	663
rpl22	gene	ribosomal-protein	−	82250	82718	468
rps19	gene	ribosomal-protein	−	82787	83066	279
rpl2	gene	ribosomal-protein	−	83125	84615	1490
rpl23	gene	ribosomal-protein	−	84633	84915	282
trnI-CAU	gene	translation-rna	−	85080	85154	74
ycf2	gene	other	+	85242	92046	6804
ycf15	gene	other	+	92187	92385	198
trnL-CAA	gene	translation-rna	−	92640	92721	81
ndhB	gene	nad-dehydrogenase	−	93277	95485	2208
rps7	gene	ribosomal-protein	−	95750	96218	468
trnV-GAC	gene	translation-rna	+	98718	98790	72
rrn16	gene	ribosomal-rna	+	99016	100507	1491
trnI-GAU	gene	translation-rna	+	100805	101824	1019
trnA-UGC	gene	translation-rna	+	101893	102771	878
rrn23	gene	ribosomal-rna	+	102928	105739	2811
rrn4.5	gene	ribosomal-rna	+	105837	105940	103
rrn5	gene	ribosomal-rna	+	106200	106321	121
trnR-ACG	gene	translation-rna	+	106564	106638	74
trnN-GUU	gene	translation-rna	−	107158	107230	72
ycf1	gene	other	+	107559	108630	1071
ndhF	gene	nad-dehydrogenase	−	108583	110815	2232
rpl32	gene	ribosomal-protein	+	111275	111446	171
trnL-UAG	gene	translation-rna	+	112142	112222	80
ccsA	gene	other	+	112316	113294	978
ndhD	gene	nad-dehydrogenase	−	113545	115078	1533
psaC	gene	photosystem-i	−	115169	115415	246
ndhE	gene	nad-dehydrogenase	−	115672	115978	306
ndhG	gene	nad-dehydrogenase	−	116195	116726	531
ndhI	gene	nad-dehydrogenase	−	117093	117600	507
ndhA	gene	nad-dehydrogenase	−	117680	119804	2124
ndhH	gene	nad-dehydrogenase	−	119805	120993	1188
rps15	gene	ribosomal-protein	−	121091	121364	273
ycf1	gene	other	−	121733	127286	5553
trnN-GUU	gene	translation-rna	+	127615	127687	72
trnR-ACG	gene	translation-rna	−	128207	128281	74
rrn5	gene	ribosomal-rna	−	128524	128645	121
rrn4.5	gene	ribosomal-rna	−	128905	129008	103
rrn23	gene	ribosomal-rna	−	129106	131917	2811
trnA-UGC	gene	translation-rna	−	132074	132952	878
trnI-GAU	gene	translation-rna	−	133021	134040	1019
rrn16	gene	ribosomal-rna	−	134338	135829	1491
trnV-GAC	gene	translation-rna	−	136055	136127	72
rps7	gene	ribosomal-protein	+	138627	139095	468
ndhB	gene	nad-dehydrogenase	+	139360	141568	2208
trnL-CAA	gene	translation-rna	+	142124	142205	81
ycf15	gene	other	−	142460	142658	198
ycf2	gene	other	−	142799	149603	6804
trnI-CAU	gene	translation-rna	+	149691	149765	74
rpl23	gene	ribosomal-protein	+	149930	150212	282
rpl2	gene	ribosomal-protein	+	150230	151720	1490

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePV837617.1DNA · accDPV837617DNA · atpBPV837617DNA · matKPV837617DNA · ndhFPV837617DNA · psbAPV837617DNA · rbcLPV837617DNA · rps12PV837617DNA · ycf1PV837617