Coordinate-aware organelle record

Paraphlomis albida var. brevidens chloroplast genome

Available OR565938.1 152,206 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	308	1367	1059
trnK-UUU	gene	translation-rna	−	1599	4189	2590
matK	gene	other	−	1904	3440	1536
rps16	gene	ribosomal-protein	−	5115	6256	1141
trnQ-UUG	gene	translation-rna	−	7218	7291	73
psbK	gene	photosystem-ii	+	7627	7813	186
psbI	gene	photosystem-ii	+	8188	8299	111
trnS-GCU	gene	translation-rna	−	8422	8510	88
trnG-UCC	gene	translation-rna	+	9202	9962	760
trnR-UCU	gene	translation-rna	+	10138	10210	72
atpA	gene	atp-synthase	−	10306	11830	1524
atpF	gene	atp-synthase	−	11917	13139	1222
atpH	gene	atp-synthase	−	13504	13750	246
atpI	gene	atp-synthase	−	14749	15493	744
rps2	gene	ribosomal-protein	−	15723	16434	711
rpoC2	gene	rna-polymerase	−	16733	20843	4110
rpoC1	gene	rna-polymerase	−	20997	23829	2832
rpoB	gene	rna-polymerase	−	23855	27068	3213
trnC-GCA	gene	translation-rna	+	28169	28250	81
petN	gene	cytochrome	+	29075	29171	96
psbM	gene	photosystem-ii	−	29958	30063	105
trnD-GUC	gene	translation-rna	−	30586	30660	74
trnY-GUA	gene	translation-rna	−	30774	30858	84
trnE-UUC	gene	translation-rna	−	30917	30990	73
trnT-GGU	gene	translation-rna	+	31549	31620	71
psbD	gene	photosystem-ii	+	32872	33934	1062
psbC	gene	photosystem-ii	+	33881	35303	1422
trnS-UGA	gene	translation-rna	−	35533	35626	93
psbZ	gene	photosystem-ii	+	35950	36139	189
trnG-GCC	gene	translation-rna	+	36368	36439	71
trnfM-CAU	gene	translation-rna	−	36588	36662	74
rps14	gene	ribosomal-protein	−	36811	37114	303
psaB	gene	photosystem-i	−	37241	39446	2205
psaA	gene	photosystem-i	−	39471	41724	2253
ycf3	gene	other	−	42451	44408	1957
trnS-GGA	gene	translation-rna	+	44737	44824	87
rps4	gene	ribosomal-protein	−	45122	45728	606
trnT-UGU	gene	translation-rna	−	46118	46191	73
trnL-UAA	gene	translation-rna	+	46869	47443	574
trnF-GAA	gene	translation-rna	+	47734	47807	73
ndhJ	gene	nad-dehydrogenase	−	48469	48964	495
ndhK	gene	nad-dehydrogenase	−	49046	49724	678
ndhC	gene	nad-dehydrogenase	−	49777	50140	363
trnV-UAC	gene	translation-rna	−	51105	51752	647
trnM-CAU	gene	translation-rna	+	51941	52013	72
atpE	gene	atp-synthase	−	52230	52632	402
atpB	gene	atp-synthase	−	52628	54119	1491
rbcL	gene	other	+	54907	56383	1476
accD	gene	other	+	57072	58539	1467
psaI	gene	photosystem-i	+	59225	59336	111
ycf4	gene	other	+	59771	60326	555
cemA	gene	other	+	60893	61583	690
petA	gene	cytochrome	+	61799	62762	963
psbJ	gene	photosystem-ii	−	63806	63929	123
psbL	gene	photosystem-ii	−	64066	64183	117
psbF	gene	photosystem-ii	−	64206	64326	120
psbE	gene	photosystem-ii	−	64340	64592	252
petL	gene	cytochrome	+	65515	65611	96
petG	gene	cytochrome	+	65785	65899	114
trnW-CCA	gene	translation-rna	−	66024	66098	74
trnP-UGG	gene	translation-rna	−	66267	66341	74
psaJ	gene	photosystem-i	+	66615	66750	135
rpl33	gene	ribosomal-protein	+	67222	67423	201
rps18	gene	ribosomal-protein	+	67569	67875	306
rpl20	gene	ribosomal-protein	−	68054	68441	387
rps12	gene	ribosomal-protein	−	69208	97353	28145
rps12	gene	ribosomal-protein	+	69208	138948	69740
clpP	gene	other	−	69448	71314	1866
psbB	gene	photosystem-ii	+	71751	73278	1527
psbT	gene	photosystem-ii	+	73464	73572	108
psbN	gene	photosystem-ii	−	73632	73764	132
psbH	gene	photosystem-ii	+	73867	74089	222
petB	gene	cytochrome	+	74213	75592	1379
petD	gene	cytochrome	+	75786	77008	1222
rpoA	gene	rna-polymerase	−	77170	78184	1014
rps11	gene	ribosomal-protein	−	78255	78687	432
rpl36	gene	ribosomal-protein	−	78774	78888	114
infA	gene	other	−	78983	79217	234
rps8	gene	ribosomal-protein	−	79341	79755	414
rpl14	gene	ribosomal-protein	−	79945	80314	369
rpl16	gene	ribosomal-protein	−	80440	81747	1307
rps3	gene	ribosomal-protein	−	81893	82556	663
rpl22	gene	ribosomal-protein	−	82540	83005	465
rps19	gene	ribosomal-protein	−	83064	83343	279
rpl2	gene	ribosomal-protein	−	83395	84887	1492
rpl23	gene	ribosomal-protein	−	84905	85187	282
trnI-CAU	gene	translation-rna	−	85352	85426	74
ycf2	gene	other	+	85514	92381	6867
ycf15	gene	other	+	92423	92672	249
trnL-CAA	gene	translation-rna	−	92932	93013	81
ndhB	gene	nad-dehydrogenase	−	93552	95764	2212
rps7	gene	ribosomal-protein	−	96038	96506	468
trnV-GAC	gene	translation-rna	+	98969	99041	72
rrn16	gene	ribosomal-rna	+	99268	100759	1491
trnI-GAU	gene	translation-rna	+	101048	102057	1009
trnA-UGC	gene	translation-rna	+	102121	103000	879
rrn23	gene	ribosomal-rna	+	103192	106002	2810
rrn4.5	gene	ribosomal-rna	+	106100	106203	103
rrn5	gene	ribosomal-rna	+	106458	106579	121
trnR-ACG	gene	translation-rna	+	106813	106886	73
trnN-GUU	gene	translation-rna	−	107453	107525	72
ndhF	gene	nad-dehydrogenase	−	108914	111137	2223
rpl32	gene	ribosomal-protein	+	111641	111818	177
trnL-UAG	gene	translation-rna	+	112541	112621	80
ccsA	gene	other	+	112705	113677	972
ndhD	gene	nad-dehydrogenase	−	113860	115381	1521
psaC	gene	photosystem-i	−	115480	115726	246
ndhE	gene	nad-dehydrogenase	−	115988	116294	306
ndhG	gene	nad-dehydrogenase	−	116515	117046	531
ndhI	gene	nad-dehydrogenase	−	117424	117922	498
ndhA	gene	nad-dehydrogenase	−	118008	120168	2160
ndhH	gene	nad-dehydrogenase	−	120169	121351	1182
rps15	gene	ribosomal-protein	−	121451	121724	273
ycf1	gene	other	−	122104	127657	5553
trnN-GUU	gene	translation-rna	+	127982	128054	72
trnR-ACG	gene	translation-rna	−	128621	128694	73
rrn5	gene	ribosomal-rna	−	128928	129049	121
rrn4.5	gene	ribosomal-rna	−	129304	129407	103
rrn23	gene	ribosomal-rna	−	129505	132315	2810
trnA-UGC	gene	translation-rna	−	132507	133386	879
trnI-GAU	gene	translation-rna	−	133450	134459	1009
rrn16	gene	ribosomal-rna	−	134748	136239	1491
trnV-GAC	gene	translation-rna	−	136466	136538	72
rps7	gene	ribosomal-protein	+	139001	139469	468
ndhB	gene	nad-dehydrogenase	+	139743	141955	2212
trnL-CAA	gene	translation-rna	+	142494	142575	81
ycf15	gene	other	−	142835	143084	249
ycf2	gene	other	−	143126	149993	6867
trnI-CAU	gene	translation-rna	+	150081	150155	74
rpl23	gene	ribosomal-protein	+	150320	150602	282
rpl2	gene	ribosomal-protein	+	150620	152112	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR565938.1DNA · accDOR565938DNA · atpBOR565938DNA · matKOR565938DNA · ndhFOR565938DNA · psbAOR565938DNA · rbcLOR565938DNA · rps12OR565938DNA · ycf1OR565938