Paraphlomis albiflora var. biflora chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · OR565950.1 · 2–76 bp · −
psbA · OR565950.1 · 317–1,375 bp · −
trnK-UUU · OR565950.1 · 1,608–4,196 bp · −
matK · OR565950.1 · 1,912–3,447 bp · −
rps16 · OR565950.1 · 5,120–6,260 bp · −
trnQ-UUG · OR565950.1 · 7,207–7,278 bp · −
trnS-GCU · OR565950.1 · 8,405–8,492 bp · −
atpA · OR565950.1 · 10,211–11,734 bp · −
atpF · OR565950.1 · 11,822–13,040 bp · −
atpH · OR565950.1 · 13,412–13,657 bp · −
atpI · OR565950.1 · 14,656–15,399 bp · −
rps2 · OR565950.1 · 15,630–16,340 bp · −
rpoC2 · OR565950.1 · 16,561–20,751 bp · −
rpoC1 · OR565950.1 · 20,906–23,737 bp · −
rpoB · OR565950.1 · 23,764–26,976 bp · −
psbM · OR565950.1 · 29,677–29,781 bp · −
trnD-GUC · OR565950.1 · 30,305–30,378 bp · −
trnY-GUA · OR565950.1 · 30,493–30,576 bp · −
trnE-UUC · OR565950.1 · 30,636–30,708 bp · −
trnS-UGA · OR565950.1 · 35,279–35,371 bp · −
trnfM-CAU · OR565950.1 · 36,335–36,408 bp · −
rps14 · OR565950.1 · 36,558–36,860 bp · −
psaB · OR565950.1 · 36,988–39,192 bp · −
psaA · OR565950.1 · 39,218–41,470 bp · −
ycf3 · OR565950.1 · 42,198–44,152 bp · −
rps4 · OR565950.1 · 44,886–45,491 bp · −
trnT-UGU · OR565950.1 · 45,884–45,956 bp · −
ndhJ · OR565950.1 · 48,239–48,715 bp · −
ndhK · OR565950.1 · 48,816–49,493 bp · −
ndhC · OR565950.1 · 49,547–49,909 bp · −
trnV-UAC · OR565950.1 · 50,875–51,527 bp · −
atpE · OR565950.1 · 52,007–52,408 bp · −
atpB · OR565950.1 · 52,405–53,895 bp · −
psbJ · OR565950.1 · 63,569–63,691 bp · −
psbL · OR565950.1 · 63,829–63,945 bp · −
psbF · OR565950.1 · 63,969–64,088 bp · −
psbE · OR565950.1 · 64,103–64,354 bp · −
trnW-CCA · OR565950.1 · 65,794–65,867 bp · −
trnP-UGG · OR565950.1 · 66,037–66,110 bp · −
rpl20 · OR565950.1 · 67,882–68,268 bp · −
rps12 · OR565950.1 · 69,035–69,148 bp · −
rps12 · OR565950.1 · 96,392–97,185 bp · −
clpP · OR565950.1 · 69,275–71,143 bp · −
psbN · OR565950.1 · 73,468–73,599 bp · −
rpoA · OR565950.1 · 77,003–78,016 bp · −
rps11 · OR565950.1 · 78,088–78,519 bp · −
rpl36 · OR565950.1 · 78,607–78,720 bp · −
infA · OR565950.1 · 78,816–79,049 bp · −
rps8 · OR565950.1 · 79,173–79,586 bp · −
rpl14 · OR565950.1 · 79,778–80,146 bp · −
rpl16 · OR565950.1 · 80,273–81,579 bp · −
rps3 · OR565950.1 · 81,726–82,388 bp · −
rpl22 · OR565950.1 · 82,373–82,837 bp · −
rps19 · OR565950.1 · 82,897–83,175 bp · −
rpl2 · OR565950.1 · 83,228–84,719 bp · −
rpl23 · OR565950.1 · 84,738–85,019 bp · −
trnI-CAU · OR565950.1 · 85,185–85,258 bp · −
trnL-CAA · OR565950.1 · 92,765–92,845 bp · −
ndhB · OR565950.1 · 93,385–95,596 bp · −
rps7 · OR565950.1 · 95,871–96,338 bp · −
trnN-GUU · OR565950.1 · 107,280–107,351 bp · −
ndhF · OR565950.1 · 108,741–110,963 bp · −
ndhD · OR565950.1 · 113,681–115,201 bp · −
psaC · OR565950.1 · 115,300–115,545 bp · −
ndhE · OR565950.1 · 115,808–116,113 bp · −
ndhG · OR565950.1 · 116,329–116,859 bp · −
ndhI · OR565950.1 · 117,238–117,744 bp · −
ndhA · OR565950.1 · 117,831–119,996 bp · −
ndhH · OR565950.1 · 119,998–121,179 bp · −
rps15 · OR565950.1 · 121,280–121,615 bp · −
ycf1 · OR565950.1 · 121,933–127,485 bp · −
trnR-ACG · OR565950.1 · 128,443–128,516 bp · −
rrn5 · OR565950.1 · 128,751–128,871 bp · −
rrn4.5 · OR565950.1 · 129,127–129,229 bp · −
rrn23 · OR565950.1 · 129,328–132,137 bp · −
trnA-UGC · OR565950.1 · 132,330–133,208 bp · −
trnI-GAU · OR565950.1 · 133,273–134,281 bp · −
rrn16 · OR565950.1 · 134,571–136,061 bp · −
trnV-GAC · OR565950.1 · 136,289–136,360 bp · −
ycf15 · OR565950.1 · 142,658–142,921 bp · −
ycf2 · OR565950.1 · 142,949–149,815 bp · −
psbK · OR565950.1 · 7,615–7,800 bp · +
psbI · OR565950.1 · 8,170–8,280 bp · +
trnG-UCC · OR565950.1 · 9,107–9,866 bp · +
trnR-UCU · OR565950.1 · 10,040–10,114 bp · +
trnC-GCA · OR565950.1 · 28,085–28,160 bp · +
petN · OR565950.1 · 28,800–28,889 bp · +
trnT-GGU · OR565950.1 · 31,298–31,368 bp · +
psbD · OR565950.1 · 32,618–33,679 bp · +
psbC · OR565950.1 · 33,627–35,048 bp · +
psbZ · OR565950.1 · 35,697–35,885 bp · +
trnG-GCC · OR565950.1 · 36,115–36,185 bp · +
trnS-GGA · OR565950.1 · 44,482–44,568 bp · +
trnL-UAA · OR565950.1 · 46,633–47,206 bp · +
trnF-GAA · OR565950.1 · 47,498–47,570 bp · +
trnM-CAU · OR565950.1 · 51,717–51,788 bp · +
rbcL · OR565950.1 · 54,683–56,149 bp · +
accD · OR565950.1 · 56,839–58,305 bp · +
psaI · OR565950.1 · 58,991–59,101 bp · +
ycf4 · OR565950.1 · 59,537–60,091 bp · +
cemA · OR565950.1 · 60,652–61,341 bp · +
petA · OR565950.1 · 61,558–62,520 bp · +
petL · OR565950.1 · 65,284–65,379 bp · +
petG · OR565950.1 · 65,554–65,667 bp · +
psaJ · OR565950.1 · 66,385–66,519 bp · +
rpl33 · OR565950.1 · 66,992–67,192 bp · +
rps18 · OR565950.1 · 67,339–67,665 bp · +
rps12 · OR565950.1 · 137,977–138,770 bp · +
psbB · OR565950.1 · 71,581–73,107 bp · +
psbT · OR565950.1 · 73,300–73,407 bp · +
psbH · OR565950.1 · 73,703–73,924 bp · +
petB · OR565950.1 · 74,049–75,424 bp · +
petD · OR565950.1 · 75,619–76,840 bp · +
ycf2 · OR565950.1 · 85,347–92,213 bp · +
ycf15 · OR565950.1 · 92,256–92,504 bp · +
trnV-GAC · OR565950.1 · 98,802–98,873 bp · +
rrn16 · OR565950.1 · 99,101–100,591 bp · +
trnI-GAU · OR565950.1 · 100,881–101,889 bp · +
trnA-UGC · OR565950.1 · 101,954–102,832 bp · +
rrn23 · OR565950.1 · 103,025–105,834 bp · +
rrn4.5 · OR565950.1 · 105,933–106,035 bp · +
rrn5 · OR565950.1 · 106,291–106,411 bp · +
trnR-ACG · OR565950.1 · 106,646–106,719 bp · +
rpl32 · OR565950.1 · 111,469–111,645 bp · +
trnL-UAG · OR565950.1 · 112,369–112,448 bp · +
ccsA · OR565950.1 · 112,533–113,498 bp · +
trnN-GUU · OR565950.1 · 127,811–127,882 bp · +
rps7 · OR565950.1 · 138,824–139,291 bp · +
ndhB · OR565950.1 · 139,566–141,777 bp · +
trnL-CAA · OR565950.1 · 142,317–142,397 bp · +
trnI-CAU · OR565950.1 · 149,904–149,977 bp · +
rpl23 · OR565950.1 · 150,143–150,424 bp · +
rpl2 · OR565950.1 · 150,443–151,934 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Paraphlomis albiflora var. biflora
ANNOTATED PLASTOME
OR565950.1
152,028 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38007 76014 114021 152028 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 317 1375 1059 Locate
trnK-UUU gene − 1608 4196 2589 Locate
matK gene − 1912 3447 1536 Locate
rps16 gene − 5120 6260 1141 Locate
trnQ-UUG gene − 7207 7278 72 Locate
psbK gene + 7615 7800 186 Locate
psbI gene + 8170 8280 111 Locate
trnS-GCU gene − 8405 8492 88 Locate
trnG-UCC gene + 9107 9866 760 Locate
trnR-UCU gene + 10040 10114 75 Locate
atpA gene − 10211 11734 1524 Locate
atpF gene − 11822 13040 1219 Locate
atpH gene − 13412 13657 246 Locate
atpI gene − 14656 15399 744 Locate
rps2 gene − 15630 16340 711 Locate
rpoC2 gene − 16561 20751 4191 Locate
rpoC1 gene − 20906 23737 2832 Locate
rpoB gene − 23764 26976 3213 Locate
trnC-GCA gene + 28085 28160 76 Locate
petN gene + 28800 28889 90 Locate
psbM gene − 29677 29781 105 Locate
trnD-GUC gene − 30305 30378 74 Locate
trnY-GUA gene − 30493 30576 84 Locate
trnE-UUC gene − 30636 30708 73 Locate
trnT-GGU gene + 31298 31368 71 Locate
psbD gene + 32618 33679 1062 Locate
psbC gene + 33627 35048 1422 Locate
trnS-UGA gene − 35279 35371 93 Locate
psbZ gene + 35697 35885 189 Locate
trnG-GCC gene + 36115 36185 71 Locate
trnfM-CAU gene − 36335 36408 74 Locate
rps14 gene − 36558 36860 303 Locate
psaB gene − 36988 39192 2205 Locate
psaA gene − 39218 41470 2253 Locate
ycf3 gene − 42198 44152 1955 Locate
trnS-GGA gene + 44482 44568 87 Locate
rps4 gene − 44886 45491 606 Locate
trnT-UGU gene − 45884 45956 73 Locate
trnL-UAA gene + 46633 47206 574 Locate
trnF-GAA gene + 47498 47570 73 Locate
ndhJ gene − 48239 48715 477 Locate
ndhK gene − 48816 49493 678 Locate
ndhC gene − 49547 49909 363 Locate
trnV-UAC gene − 50875 51527 653 Locate
trnM-CAU gene + 51717 51788 72 Locate
atpE gene − 52007 52408 402 Locate
atpB gene − 52405 53895 1491 Locate
rbcL gene + 54683 56149 1467 Locate
accD gene + 56839 58305 1467 Locate
psaI gene + 58991 59101 111 Locate
ycf4 gene + 59537 60091 555 Locate
cemA gene + 60652 61341 690 Locate
petA gene + 61558 62520 963 Locate
psbJ gene − 63569 63691 123 Locate
psbL gene − 63829 63945 117 Locate
psbF gene − 63969 64088 120 Locate
psbE gene − 64103 64354 252 Locate
petL gene + 65284 65379 96 Locate
petG gene + 65554 65667 114 Locate
trnW-CCA gene − 65794 65867 74 Locate
trnP-UGG gene − 66037 66110 74 Locate
psaJ gene + 66385 66519 135 Locate
rpl33 gene + 66992 67192 201 Locate
rps18 gene + 67339 67665 327 Locate
rpl20 gene − 67882 68268 387 Locate
rps12 gene − 69035 69148 114 Locate
clpP gene − 69275 71143 1869 Locate
psbB gene + 71581 73107 1527 Locate
psbT gene + 73300 73407 108 Locate
psbN gene − 73468 73599 132 Locate
psbH gene + 73703 73924 222 Locate
petB gene + 74049 75424 1376 Locate
petD gene + 75619 76840 1222 Locate
rpoA gene − 77003 78016 1014 Locate
rps11 gene − 78088 78519 432 Locate
rpl36 gene − 78607 78720 114 Locate
infA gene − 78816 79049 234 Locate
rps8 gene − 79173 79586 414 Locate
rpl14 gene − 79778 80146 369 Locate
rpl16 gene − 80273 81579 1307 Locate
rps3 gene − 81726 82388 663 Locate
rpl22 gene − 82373 82837 465 Locate
rps19 gene − 82897 83175 279 Locate
rpl2 gene − 83228 84719 1492 Locate
rpl23 gene − 84738 85019 282 Locate
trnI-CAU gene − 85185 85258 74 Locate
ycf2 gene + 85347 92213 6867 Locate
ycf15 gene + 92256 92504 249 Locate
trnL-CAA gene − 92765 92845 81 Locate
ndhB gene − 93385 95596 2212 Locate
rps7 gene − 95871 96338 468 Locate
rps12 gene − 96392 97185 794 Locate
trnV-GAC gene + 98802 98873 72 Locate
rrn16 gene + 99101 100591 1491 Locate
trnI-GAU gene + 100881 101889 1009 Locate
trnA-UGC gene + 101954 102832 879 Locate
rrn23 gene + 103025 105834 2810 Locate
rrn4.5 gene + 105933 106035 103 Locate
rrn5 gene + 106291 106411 121 Locate
trnR-ACG gene + 106646 106719 74 Locate
trnN-GUU gene − 107280 107351 72 Locate
ndhF gene − 108741 110963 2223 Locate
rpl32 gene + 111469 111645 177 Locate
trnL-UAG gene + 112369 112448 80 Locate
ccsA gene + 112533 113498 966 Locate
ndhD gene − 113681 115201 1521 Locate
psaC gene − 115300 115545 246 Locate
ndhE gene − 115808 116113 306 Locate
ndhG gene − 116329 116859 531 Locate
ndhI gene − 117238 117744 507 Locate
ndhA gene − 117831 119996 2166 Locate
ndhH gene − 119998 121179 1182 Locate
rps15 gene − 121280 121615 336 Locate
ycf1 gene − 121933 127485 5553 Locate
trnN-GUU gene + 127811 127882 72 Locate
trnR-ACG gene − 128443 128516 74 Locate
rrn5 gene − 128751 128871 121 Locate
rrn4.5 gene − 129127 129229 103 Locate
rrn23 gene − 129328 132137 2810 Locate
trnA-UGC gene − 132330 133208 879 Locate
trnI-GAU gene − 133273 134281 1009 Locate
rrn16 gene − 134571 136061 1491 Locate
trnV-GAC gene − 136289 136360 72 Locate
rps12 gene + 137977 138770 794 Locate
rps7 gene + 138824 139291 468 Locate
ndhB gene + 139566 141777 2212 Locate
trnL-CAA gene + 142317 142397 81 Locate
ycf15 gene − 142658 142921 264 Locate
ycf2 gene − 142949 149815 6867 Locate
trnI-CAU gene + 149904 149977 74 Locate
rpl23 gene + 150143 150424 282 Locate
rpl2 gene + 150443 151934 1492 Locate
Status Available
Accession OR565950.1
Length 152,028 bp
GC content 38.4%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources