Paraphlomis albotomentosa chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · OR565962.1 · 2–76 bp · −
psbA · OR565962.1 · 308–1,366 bp · −
trnK-UUU · OR565962.1 · 1,599–4,187 bp · −
matK · OR565962.1 · 1,903–3,438 bp · −
rps16 · OR565962.1 · 5,098–6,238 bp · −
trnQ-UUG · OR565962.1 · 7,187–7,258 bp · −
trnS-GCU · OR565962.1 · 8,390–8,477 bp · −
atpA · OR565962.1 · 10,274–11,797 bp · −
atpF · OR565962.1 · 11,885–13,105 bp · −
atpH · OR565962.1 · 13,474–13,719 bp · −
atpI · OR565962.1 · 14,719–15,462 bp · −
rps2 · OR565962.1 · 15,693–16,403 bp · −
rpoC2 · OR565962.1 · 16,704–20,813 bp · −
rpoC1 · OR565962.1 · 20,968–23,799 bp · −
rpoB · OR565962.1 · 23,826–27,038 bp · −
psbM · OR565962.1 · 29,929–30,033 bp · −
trnD-GUC · OR565962.1 · 30,557–30,630 bp · −
trnY-GUA · OR565962.1 · 30,745–30,828 bp · −
trnE-UUC · OR565962.1 · 30,888–30,960 bp · −
trnS-UGA · OR565962.1 · 35,502–35,594 bp · −
trnfM-CAU · OR565962.1 · 36,557–36,630 bp · −
rps14 · OR565962.1 · 36,780–37,082 bp · −
psaB · OR565962.1 · 37,210–39,414 bp · −
psaA · OR565962.1 · 39,440–41,692 bp · −
ycf3 · OR565962.1 · 42,420–44,379 bp · −
rps4 · OR565962.1 · 45,094–45,699 bp · −
trnT-UGU · OR565962.1 · 46,090–46,162 bp · −
ndhJ · OR565962.1 · 48,447–48,923 bp · −
ndhK · OR565962.1 · 49,024–49,701 bp · −
ndhC · OR565962.1 · 49,755–50,117 bp · −
trnV-UAC · OR565962.1 · 51,083–51,729 bp · −
atpE · OR565962.1 · 52,208–52,609 bp · −
atpB · OR565962.1 · 52,606–54,096 bp · −
psbJ · OR565962.1 · 63,784–63,906 bp · −
psbL · OR565962.1 · 64,044–64,160 bp · −
psbF · OR565962.1 · 64,184–64,303 bp · −
psbE · OR565962.1 · 64,318–64,569 bp · −
trnW-CCA · OR565962.1 · 66,008–66,081 bp · −
trnP-UGG · OR565962.1 · 66,251–66,324 bp · −
rpl20 · OR565962.1 · 68,038–68,424 bp · −
rps12 · OR565962.1 · 69,191–69,304 bp · −
rps12 · OR565962.1 · 96,555–97,348 bp · −
clpP · OR565962.1 · 69,430–71,296 bp · −
psbN · OR565962.1 · 73,623–73,754 bp · −
rpoA · OR565962.1 · 77,161–78,174 bp · −
rps11 · OR565962.1 · 78,246–78,677 bp · −
rpl36 · OR565962.1 · 78,765–78,878 bp · −
infA · OR565962.1 · 78,974–79,207 bp · −
rps8 · OR565962.1 · 79,332–79,745 bp · −
rpl14 · OR565962.1 · 79,936–80,304 bp · −
rpl16 · OR565962.1 · 80,431–81,737 bp · −
rps3 · OR565962.1 · 81,884–82,546 bp · −
rpl22 · OR565962.1 · 82,531–82,995 bp · −
rps19 · OR565962.1 · 83,055–83,333 bp · −
rpl2 · OR565962.1 · 83,386–84,877 bp · −
rpl23 · OR565962.1 · 84,896–85,177 bp · −
trnI-CAU · OR565962.1 · 85,343–85,416 bp · −
trnL-CAA · OR565962.1 · 92,928–93,008 bp · −
ndhB · OR565962.1 · 93,548–95,759 bp · −
rps7 · OR565962.1 · 96,034–96,501 bp · −
trnN-GUU · OR565962.1 · 107,449–107,520 bp · −
ndhF · OR565962.1 · 108,910–111,132 bp · −
ndhD · OR565962.1 · 113,856–115,376 bp · −
psaC · OR565962.1 · 115,476–115,721 bp · −
ndhE · OR565962.1 · 115,984–116,289 bp · −
ndhG · OR565962.1 · 116,511–117,041 bp · −
ndhI · OR565962.1 · 117,420–117,917 bp · −
ndhA · OR565962.1 · 118,004–120,163 bp · −
ndhH · OR565962.1 · 120,165–121,346 bp · −
rps15 · OR565962.1 · 121,447–121,719 bp · −
ycf1 · OR565962.1 · 122,100–127,652 bp · −
trnR-ACG · OR565962.1 · 128,616–128,689 bp · −
rrn5 · OR565962.1 · 128,924–129,044 bp · −
rrn4.5 · OR565962.1 · 129,300–129,402 bp · −
rrn23 · OR565962.1 · 129,501–132,310 bp · −
trnA-UGC · OR565962.1 · 132,503–133,381 bp · −
trnI-GAU · OR565962.1 · 133,446–134,454 bp · −
rrn16 · OR565962.1 · 134,744–136,234 bp · −
trnV-GAC · OR565962.1 · 136,462–136,533 bp · −
ycf15 · OR565962.1 · 142,836–143,084 bp · −
ycf2 · OR565962.1 · 143,127–149,993 bp · −
psbK · OR565962.1 · 7,595–7,780 bp · +
psbI · OR565962.1 · 8,156–8,266 bp · +
trnG-UCC · OR565962.1 · 9,170–9,929 bp · +
trnR-UCU · OR565962.1 · 10,103–10,177 bp · +
trnC-GCA · OR565962.1 · 28,140–28,220 bp · +
petN · OR565962.1 · 29,046–29,141 bp · +
trnT-GGU · OR565962.1 · 31,520–31,590 bp · +
psbD · OR565962.1 · 32,841–33,902 bp · +
psbC · OR565962.1 · 33,850–35,271 bp · +
psbZ · OR565962.1 · 35,919–36,107 bp · +
trnG-GCC · OR565962.1 · 36,337–36,407 bp · +
trnS-GGA · OR565962.1 · 44,709–44,795 bp · +
trnL-UAA · OR565962.1 · 46,841–47,414 bp · +
trnF-GAA · OR565962.1 · 47,706–47,778 bp · +
trnM-CAU · OR565962.1 · 51,919–51,990 bp · +
rbcL · OR565962.1 · 54,906–56,360 bp · +
accD · OR565962.1 · 57,050–58,516 bp · +
psaI · OR565962.1 · 59,203–59,313 bp · +
ycf4 · OR565962.1 · 59,749–60,303 bp · +
cemA · OR565962.1 · 60,871–61,560 bp · +
petA · OR565962.1 · 61,777–62,739 bp · +
petL · OR565962.1 · 65,499–65,594 bp · +
petG · OR565962.1 · 65,769–65,882 bp · +
psaJ · OR565962.1 · 66,599–66,733 bp · +
rpl33 · OR565962.1 · 67,206–67,406 bp · +
rps18 · OR565962.1 · 67,553–67,858 bp · +
rps12 · OR565962.1 · 138,150–138,943 bp · +
psbB · OR565962.1 · 71,734–73,260 bp · +
psbT · OR565962.1 · 73,455–73,562 bp · +
psbH · OR565962.1 · 73,858–74,079 bp · +
petB · OR565962.1 · 74,204–75,582 bp · +
petD · OR565962.1 · 75,777–76,998 bp · +
ycf2 · OR565962.1 · 85,505–92,371 bp · +
ycf15 · OR565962.1 · 92,414–92,662 bp · +
trnV-GAC · OR565962.1 · 98,965–99,036 bp · +
rrn16 · OR565962.1 · 99,264–100,754 bp · +
trnI-GAU · OR565962.1 · 101,044–102,052 bp · +
trnA-UGC · OR565962.1 · 102,117–102,995 bp · +
rrn23 · OR565962.1 · 103,188–105,997 bp · +
rrn4.5 · OR565962.1 · 106,096–106,198 bp · +
rrn5 · OR565962.1 · 106,454–106,574 bp · +
trnR-ACG · OR565962.1 · 106,809–106,882 bp · +
rpl32 · OR565962.1 · 111,638–111,814 bp · +
trnL-UAG · OR565962.1 · 112,538–112,617 bp · +
ccsA · OR565962.1 · 112,702–113,673 bp · +
trnN-GUU · OR565962.1 · 127,978–128,049 bp · +
rps7 · OR565962.1 · 138,997–139,464 bp · +
ndhB · OR565962.1 · 139,739–141,950 bp · +
trnL-CAA · OR565962.1 · 142,490–142,570 bp · +
trnI-CAU · OR565962.1 · 150,082–150,155 bp · +
rpl23 · OR565962.1 · 150,321–150,602 bp · +
rpl2 · OR565962.1 · 150,621–152,112 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Paraphlomis albotomentosa
ANNOTATED PLASTOME
OR565962.1
152,206 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38052 76103 114154 152206 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 308 1366 1059 Locate
trnK-UUU gene − 1599 4187 2589 Locate
matK gene − 1903 3438 1536 Locate
rps16 gene − 5098 6238 1141 Locate
trnQ-UUG gene − 7187 7258 72 Locate
psbK gene + 7595 7780 186 Locate
psbI gene + 8156 8266 111 Locate
trnS-GCU gene − 8390 8477 88 Locate
trnG-UCC gene + 9170 9929 760 Locate
trnR-UCU gene + 10103 10177 75 Locate
atpA gene − 10274 11797 1524 Locate
atpF gene − 11885 13105 1221 Locate
atpH gene − 13474 13719 246 Locate
atpI gene − 14719 15462 744 Locate
rps2 gene − 15693 16403 711 Locate
rpoC2 gene − 16704 20813 4110 Locate
rpoC1 gene − 20968 23799 2832 Locate
rpoB gene − 23826 27038 3213 Locate
trnC-GCA gene + 28140 28220 81 Locate
petN gene + 29046 29141 96 Locate
psbM gene − 29929 30033 105 Locate
trnD-GUC gene − 30557 30630 74 Locate
trnY-GUA gene − 30745 30828 84 Locate
trnE-UUC gene − 30888 30960 73 Locate
trnT-GGU gene + 31520 31590 71 Locate
psbD gene + 32841 33902 1062 Locate
psbC gene + 33850 35271 1422 Locate
trnS-UGA gene − 35502 35594 93 Locate
psbZ gene + 35919 36107 189 Locate
trnG-GCC gene + 36337 36407 71 Locate
trnfM-CAU gene − 36557 36630 74 Locate
rps14 gene − 36780 37082 303 Locate
psaB gene − 37210 39414 2205 Locate
psaA gene − 39440 41692 2253 Locate
ycf3 gene − 42420 44379 1960 Locate
trnS-GGA gene + 44709 44795 87 Locate
rps4 gene − 45094 45699 606 Locate
trnT-UGU gene − 46090 46162 73 Locate
trnL-UAA gene + 46841 47414 574 Locate
trnF-GAA gene + 47706 47778 73 Locate
ndhJ gene − 48447 48923 477 Locate
ndhK gene − 49024 49701 678 Locate
ndhC gene − 49755 50117 363 Locate
trnV-UAC gene − 51083 51729 647 Locate
trnM-CAU gene + 51919 51990 72 Locate
atpE gene − 52208 52609 402 Locate
atpB gene − 52606 54096 1491 Locate
rbcL gene + 54906 56360 1455 Locate
accD gene + 57050 58516 1467 Locate
psaI gene + 59203 59313 111 Locate
ycf4 gene + 59749 60303 555 Locate
cemA gene + 60871 61560 690 Locate
petA gene + 61777 62739 963 Locate
psbJ gene − 63784 63906 123 Locate
psbL gene − 64044 64160 117 Locate
psbF gene − 64184 64303 120 Locate
psbE gene − 64318 64569 252 Locate
petL gene + 65499 65594 96 Locate
petG gene + 65769 65882 114 Locate
trnW-CCA gene − 66008 66081 74 Locate
trnP-UGG gene − 66251 66324 74 Locate
psaJ gene + 66599 66733 135 Locate
rpl33 gene + 67206 67406 201 Locate
rps18 gene + 67553 67858 306 Locate
rpl20 gene − 68038 68424 387 Locate
rps12 gene − 69191 69304 114 Locate
clpP gene − 69430 71296 1867 Locate
psbB gene + 71734 73260 1527 Locate
psbT gene + 73455 73562 108 Locate
psbN gene − 73623 73754 132 Locate
psbH gene + 73858 74079 222 Locate
petB gene + 74204 75582 1379 Locate
petD gene + 75777 76998 1222 Locate
rpoA gene − 77161 78174 1014 Locate
rps11 gene − 78246 78677 432 Locate
rpl36 gene − 78765 78878 114 Locate
infA gene − 78974 79207 234 Locate
rps8 gene − 79332 79745 414 Locate
rpl14 gene − 79936 80304 369 Locate
rpl16 gene − 80431 81737 1307 Locate
rps3 gene − 81884 82546 663 Locate
rpl22 gene − 82531 82995 465 Locate
rps19 gene − 83055 83333 279 Locate
rpl2 gene − 83386 84877 1492 Locate
rpl23 gene − 84896 85177 282 Locate
trnI-CAU gene − 85343 85416 74 Locate
ycf2 gene + 85505 92371 6867 Locate
ycf15 gene + 92414 92662 249 Locate
trnL-CAA gene − 92928 93008 81 Locate
ndhB gene − 93548 95759 2212 Locate
rps7 gene − 96034 96501 468 Locate
rps12 gene − 96555 97348 794 Locate
trnV-GAC gene + 98965 99036 72 Locate
rrn16 gene + 99264 100754 1491 Locate
trnI-GAU gene + 101044 102052 1009 Locate
trnA-UGC gene + 102117 102995 879 Locate
rrn23 gene + 103188 105997 2810 Locate
rrn4.5 gene + 106096 106198 103 Locate
rrn5 gene + 106454 106574 121 Locate
trnR-ACG gene + 106809 106882 74 Locate
trnN-GUU gene − 107449 107520 72 Locate
ndhF gene − 108910 111132 2223 Locate
rpl32 gene + 111638 111814 177 Locate
trnL-UAG gene + 112538 112617 80 Locate
ccsA gene + 112702 113673 972 Locate
ndhD gene − 113856 115376 1521 Locate
psaC gene − 115476 115721 246 Locate
ndhE gene − 115984 116289 306 Locate
ndhG gene − 116511 117041 531 Locate
ndhI gene − 117420 117917 498 Locate
ndhA gene − 118004 120163 2160 Locate
ndhH gene − 120165 121346 1182 Locate
rps15 gene − 121447 121719 273 Locate
ycf1 gene − 122100 127652 5553 Locate
trnN-GUU gene + 127978 128049 72 Locate
trnR-ACG gene − 128616 128689 74 Locate
rrn5 gene − 128924 129044 121 Locate
rrn4.5 gene − 129300 129402 103 Locate
rrn23 gene − 129501 132310 2810 Locate
trnA-UGC gene − 132503 133381 879 Locate
trnI-GAU gene − 133446 134454 1009 Locate
rrn16 gene − 134744 136234 1491 Locate
trnV-GAC gene − 136462 136533 72 Locate
rps12 gene + 138150 138943 794 Locate
rps7 gene + 138997 139464 468 Locate
ndhB gene + 139739 141950 2212 Locate
trnL-CAA gene + 142490 142570 81 Locate
ycf15 gene − 142836 143084 249 Locate
ycf2 gene − 143127 149993 6867 Locate
trnI-CAU gene + 150082 150155 74 Locate
rpl23 gene + 150321 150602 282 Locate
rpl2 gene + 150621 152112 1492 Locate
Status Available
Accession OR565962.1
Length 152,206 bp
GC content 38.4%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources