Coordinate-aware organelle record

Paraphlomis caloneura chloroplast genome

Available OR565942.1 152,211 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	307	1366	1059
trnK-UUU	gene	translation-rna	−	1598	4189	2591
matK	gene	other	−	1904	3440	1536
rps16	gene	ribosomal-protein	−	5114	6255	1141
trnQ-UUG	gene	translation-rna	−	7203	7276	73
psbK	gene	photosystem-ii	+	7612	7798	186
psbI	gene	photosystem-ii	+	8173	8284	111
trnS-GCU	gene	translation-rna	−	8408	8496	88
trnG-UCC	gene	translation-rna	+	9189	9949	760
trnR-UCU	gene	translation-rna	+	10122	10197	75
atpA	gene	atp-synthase	−	10293	11817	1524
atpF	gene	atp-synthase	−	11904	13127	1223
atpH	gene	atp-synthase	−	13495	13741	246
atpI	gene	atp-synthase	−	14740	15484	744
rps2	gene	ribosomal-protein	−	15714	16425	711
rpoC2	gene	rna-polymerase	−	16724	20834	4110
rpoC1	gene	rna-polymerase	−	20988	23820	2832
rpoB	gene	rna-polymerase	−	23846	27059	3213
trnC-GCA	gene	translation-rna	+	28162	28238	76
petN	gene	cytochrome	+	29074	29164	90
psbM	gene	photosystem-ii	−	29951	30056	105
trnD-GUC	gene	translation-rna	−	30579	30653	74
trnY-GUA	gene	translation-rna	−	30767	30851	84
trnE-UUC	gene	translation-rna	−	30910	30983	73
trnT-GGU	gene	translation-rna	−	31542	31614	72
psbD	gene	photosystem-ii	+	32863	33925	1062
psbC	gene	photosystem-ii	+	33872	35294	1422
trnS-UGA	gene	translation-rna	−	35524	35617	93
psbZ	gene	photosystem-ii	+	35941	36130	189
trnG-GCC	gene	translation-rna	+	36359	36430	71
trnfM-CAU	gene	translation-rna	−	36579	36653	74
rps14	gene	ribosomal-protein	−	36802	37105	303
psaB	gene	photosystem-i	−	37232	39437	2205
psaA	gene	photosystem-i	−	39462	41715	2253
ycf3	gene	other	−	42442	44398	1956
trnS-GGA	gene	translation-rna	+	44727	44814	87
rps4	gene	ribosomal-protein	−	45112	45718	606
trnT-UGU	gene	translation-rna	−	46108	46181	73
trnL-UAA	gene	translation-rna	+	46869	47443	574
trnF-GAA	gene	translation-rna	+	47734	47807	73
ndhJ	gene	nad-dehydrogenase	−	48469	48946	477
ndhK	gene	nad-dehydrogenase	−	49046	49724	678
ndhC	gene	nad-dehydrogenase	−	49777	50140	363
trnV-UAC	gene	translation-rna	−	51105	51752	647
trnM-CAU	gene	translation-rna	+	51941	52013	72
atpE	gene	atp-synthase	−	52230	52632	402
atpB	gene	atp-synthase	−	52628	54119	1491
rbcL	gene	other	+	54901	56377	1476
accD	gene	other	+	57066	58533	1467
psaI	gene	photosystem-i	+	59219	59330	111
ycf4	gene	other	+	59765	60320	555
cemA	gene	other	+	60887	61577	690
petA	gene	cytochrome	+	61793	62756	963
psbJ	gene	photosystem-ii	−	63800	63923	123
psbL	gene	photosystem-ii	−	64060	64177	117
psbF	gene	photosystem-ii	−	64200	64320	120
psbE	gene	photosystem-ii	−	64334	64586	252
petL	gene	cytochrome	+	65516	65612	96
petG	gene	cytochrome	+	65786	65900	114
trnW-CCA	gene	translation-rna	−	66025	66099	74
trnP-UGG	gene	translation-rna	−	66268	66342	74
psaJ	gene	photosystem-i	+	66616	66751	135
rpl33	gene	ribosomal-protein	+	67223	67424	201
rps18	gene	ribosomal-protein	+	67570	67876	306
rpl20	gene	ribosomal-protein	−	68055	68442	387
rps12	gene	ribosomal-protein	−	69209	97360	28151
rps12	gene	ribosomal-protein	+	69209	138953	69744
clpP	gene	other	−	69449	71314	1865
psbB	gene	photosystem-ii	+	71751	73278	1527
psbT	gene	photosystem-ii	+	73471	73579	108
psbN	gene	photosystem-ii	−	73639	73771	132
psbH	gene	photosystem-ii	+	73874	74096	222
petB	gene	cytochrome	+	74220	75599	1379
petD	gene	cytochrome	+	75793	77015	1222
rpoA	gene	rna-polymerase	−	77177	78191	1014
rps11	gene	ribosomal-protein	−	78262	78694	432
rpl36	gene	ribosomal-protein	−	78781	78895	114
infA	gene	other	−	78990	79224	234
rps8	gene	ribosomal-protein	−	79348	79762	414
rpl14	gene	ribosomal-protein	−	79952	80321	369
rpl16	gene	ribosomal-protein	−	80447	81754	1307
rps3	gene	ribosomal-protein	−	81900	82563	663
rpl22	gene	ribosomal-protein	−	82547	83012	465
rps19	gene	ribosomal-protein	−	83071	83350	279
rpl2	gene	ribosomal-protein	−	83402	84894	1492
rpl23	gene	ribosomal-protein	−	84912	85194	282
trnI-CAU	gene	translation-rna	−	85359	85433	74
ycf2	gene	other	+	85521	92388	6867
ycf15	gene	other	+	92430	92679	249
trnL-CAA	gene	translation-rna	−	92939	93020	81
ndhB	gene	nad-dehydrogenase	−	93559	95771	2212
rps7	gene	ribosomal-protein	−	96045	96513	468
trnV-GAC	gene	translation-rna	+	98976	99048	72
rrn16	gene	ribosomal-rna	+	99275	100766	1491
trnI-GAU	gene	translation-rna	+	101055	102064	1009
trnA-UGC	gene	translation-rna	+	102128	103007	879
rrn23	gene	ribosomal-rna	+	103199	106009	2810
rrn4.5	gene	ribosomal-rna	+	106107	106210	103
rrn5	gene	ribosomal-rna	+	106465	106586	121
trnR-ACG	gene	translation-rna	+	106820	106894	74
trnN-GUU	gene	translation-rna	−	107460	107532	72
ndhF	gene	nad-dehydrogenase	−	108921	111144	2223
rpl32	gene	ribosomal-protein	+	111648	111825	177
trnL-UAG	gene	translation-rna	+	112548	112628	80
ccsA	gene	other	+	112712	113684	972
ndhD	gene	nad-dehydrogenase	−	113866	115387	1521
psaC	gene	photosystem-i	−	115485	115731	246
ndhE	gene	nad-dehydrogenase	−	115993	116299	306
ndhG	gene	nad-dehydrogenase	−	116520	117051	531
ndhI	gene	nad-dehydrogenase	−	117429	117927	498
ndhA	gene	nad-dehydrogenase	−	118013	120173	2160
ndhH	gene	nad-dehydrogenase	−	120174	121356	1182
rps15	gene	ribosomal-protein	−	121456	121729	273
ycf1	gene	other	−	122109	127662	5553
trnN-GUU	gene	translation-rna	+	127987	128059	72
trnR-ACG	gene	translation-rna	−	128625	128699	74
rrn5	gene	ribosomal-rna	−	128933	129054	121
rrn4.5	gene	ribosomal-rna	−	129309	129412	103
rrn23	gene	ribosomal-rna	−	129510	132320	2810
trnA-UGC	gene	translation-rna	−	132512	133391	879
trnI-GAU	gene	translation-rna	−	133455	134464	1009
rrn16	gene	ribosomal-rna	−	134753	136244	1491
trnV-GAC	gene	translation-rna	−	136471	136543	72
rps7	gene	ribosomal-protein	+	139006	139474	468
ndhB	gene	nad-dehydrogenase	+	139748	141960	2212
trnL-CAA	gene	translation-rna	+	142499	142580	81
ycf15	gene	other	−	142840	143104	264
ycf2	gene	other	−	143131	149998	6867
trnI-CAU	gene	translation-rna	+	150086	150160	74
rpl23	gene	ribosomal-protein	+	150325	150607	282
rpl2	gene	ribosomal-protein	+	150625	152117	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR565942.1DNA · accDOR565942DNA · atpBOR565942DNA · matKOR565942DNA · ndhFOR565942DNA · psbAOR565942DNA · rbcLOR565942DNA · rps12OR565942DNA · ycf1OR565942