Coordinate-aware organelle record

Paraphlomis foliata subsp. montigena chloroplast genome

Available OR565931.1 152,219 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	306	1365	1059
trnK-UUU	gene	translation-rna	−	1597	4181	2584
matK	gene	other	−	1896	3432	1536
rps16	gene	ribosomal-protein	−	5108	6254	1146
trnQ-UUG	gene	translation-rna	−	7202	7274	72
psbK	gene	photosystem-ii	+	7610	7796	186
psbI	gene	photosystem-ii	+	8174	8285	111
trnS-GCU	gene	translation-rna	−	8407	8495	88
trnG-UCC	gene	translation-rna	+	9185	9936	751
trnR-UCU	gene	translation-rna	+	10109	10184	75
atpA	gene	atp-synthase	−	10280	11804	1524
atpF	gene	atp-synthase	−	11891	13112	1221
atpH	gene	atp-synthase	−	13477	13723	246
atpI	gene	atp-synthase	−	14758	15502	744
rps2	gene	ribosomal-protein	−	15732	16443	711
rpoC2	gene	rna-polymerase	−	16663	20851	4188
rpoC1	gene	rna-polymerase	−	21005	23836	2831
rpoB	gene	rna-polymerase	−	23862	27075	3213
trnC-GCA	gene	translation-rna	+	28176	28252	76
petN	gene	cytochrome	+	29088	29178	90
psbM	gene	photosystem-ii	−	29970	30075	105
trnD-GUC	gene	translation-rna	−	30598	30672	74
trnY-GUA	gene	translation-rna	−	30786	30870	84
trnE-UUC	gene	translation-rna	−	30929	30999	70
trnT-GGU	gene	translation-rna	+	31561	31632	71
psbD	gene	photosystem-ii	+	32882	33944	1062
psbC	gene	photosystem-ii	+	33891	35313	1422
trnS-UGA	gene	translation-rna	−	35545	35638	93
psbZ	gene	photosystem-ii	+	35954	36143	189
trnG-GCC	gene	translation-rna	+	36367	36438	71
trnfM-CAU	gene	translation-rna	−	36587	36661	74
rps14	gene	ribosomal-protein	−	36810	37113	303
psaB	gene	photosystem-i	−	37240	39445	2205
psaA	gene	photosystem-i	−	39470	41723	2253
ycf3	gene	other	−	42450	44404	1954
trnS-GGA	gene	translation-rna	+	44720	44807	87
rps4	gene	ribosomal-protein	−	45104	45710	606
trnT-UGU	gene	translation-rna	−	46100	46173	73
trnL-UAA	gene	translation-rna	+	46846	47420	574
trnF-GAA	gene	translation-rna	+	47711	47784	73
ndhJ	gene	nad-dehydrogenase	−	48452	48947	495
ndhK	gene	nad-dehydrogenase	−	49029	49707	678
ndhC	gene	nad-dehydrogenase	−	49760	50123	363
trnV-UAC	gene	translation-rna	−	51088	51741	653
trnM-CAU	gene	translation-rna	+	51930	52002	72
atpE	gene	atp-synthase	−	52219	52621	402
atpB	gene	atp-synthase	−	52617	54114	1497
rbcL	gene	other	+	54895	56350	1455
accD	gene	other	+	57035	58502	1467
psaI	gene	photosystem-i	+	59190	59301	111
ycf4	gene	other	+	59731	60286	555
cemA	gene	other	+	60846	61536	690
petA	gene	cytochrome	+	61752	62715	963
psbJ	gene	photosystem-ii	−	63761	63884	123
psbL	gene	photosystem-ii	−	64021	64138	117
psbF	gene	photosystem-ii	−	64161	64281	120
psbE	gene	photosystem-ii	−	64295	64547	252
petL	gene	cytochrome	+	65479	65575	96
petG	gene	cytochrome	+	65749	65863	114
trnW-CCA	gene	translation-rna	−	65988	66062	74
trnP-UGG	gene	translation-rna	−	66231	66305	74
psaJ	gene	photosystem-i	+	66579	66714	135
rpl33	gene	ribosomal-protein	+	67185	67386	201
rps18	gene	ribosomal-protein	+	67532	67838	306
rpl20	gene	ribosomal-protein	−	68017	68404	387
rps12	gene	ribosomal-protein	−	69170	97353	28183
rps12	gene	ribosomal-protein	+	69170	138948	69778
clpP	gene	other	−	69410	71275	1865
psbB	gene	photosystem-ii	+	71712	73239	1527
psbT	gene	photosystem-ii	+	73431	73539	108
psbN	gene	photosystem-ii	−	73599	73731	132
psbH	gene	photosystem-ii	+	73834	74056	222
petB	gene	cytochrome	+	74170	75551	1381
petD	gene	cytochrome	+	75745	76967	1222
rpoA	gene	rna-polymerase	−	77129	78143	1014
rps11	gene	ribosomal-protein	−	78214	78670	456
rpl36	gene	ribosomal-protein	−	78757	78871	114
infA	gene	other	−	78966	79200	234
rps8	gene	ribosomal-protein	−	79328	79742	414
rpl14	gene	ribosomal-protein	−	79932	80301	369
rpl16	gene	ribosomal-protein	−	80427	81734	1307
rps3	gene	ribosomal-protein	−	81880	82543	663
rpl22	gene	ribosomal-protein	−	82527	82992	465
rps19	gene	ribosomal-protein	−	83051	83330	279
rpl2	gene	ribosomal-protein	−	83381	84873	1492
rpl23	gene	ribosomal-protein	−	84891	85173	282
trnI-CAU	gene	translation-rna	−	85338	85412	74
ycf2	gene	other	+	85500	92385	6885
ycf15	gene	other	+	92427	92676	249
trnL-CAA	gene	translation-rna	−	92936	93017	81
ndhB	gene	nad-dehydrogenase	−	93552	95764	2212
rps7	gene	ribosomal-protein	−	96038	96506	468
trnV-GAC	gene	translation-rna	+	98969	99041	72
rrn16	gene	ribosomal-rna	+	99268	100759	1491
trnI-GAU	gene	translation-rna	+	101048	102057	1009
trnA-UGC	gene	translation-rna	+	102121	103000	879
rrn23	gene	ribosomal-rna	+	103192	106002	2810
rrn4.5	gene	ribosomal-rna	+	106100	106203	103
rrn5	gene	ribosomal-rna	+	106458	106579	121
trnR-ACG	gene	translation-rna	+	106813	106887	74
trnN-GUU	gene	translation-rna	−	107453	107525	72
ndhF	gene	nad-dehydrogenase	−	108914	111131	2217
rpl32	gene	ribosomal-protein	+	111635	111812	177
trnL-UAG	gene	translation-rna	+	112535	112615	80
ccsA	gene	other	+	112699	113671	972
ndhD	gene	nad-dehydrogenase	−	113853	115374	1521
psaC	gene	photosystem-i	−	115472	115718	246
ndhE	gene	nad-dehydrogenase	−	115980	116286	306
ndhG	gene	nad-dehydrogenase	−	116507	117038	531
ndhI	gene	nad-dehydrogenase	−	117416	117923	507
ndhA	gene	nad-dehydrogenase	−	118009	120168	2159
ndhH	gene	nad-dehydrogenase	−	120169	121351	1182
rps15	gene	ribosomal-protein	−	121463	121796	333
ycf1	gene	other	−	122113	127657	5544
trnN-GUU	gene	translation-rna	+	127982	128054	72
trnR-ACG	gene	translation-rna	−	128620	128694	74
rrn5	gene	ribosomal-rna	−	128928	129049	121
rrn4.5	gene	ribosomal-rna	−	129304	129407	103
rrn23	gene	ribosomal-rna	−	129505	132315	2810
trnA-UGC	gene	translation-rna	−	132507	133386	879
trnI-GAU	gene	translation-rna	−	133450	134459	1009
rrn16	gene	ribosomal-rna	−	134748	136239	1491
trnV-GAC	gene	translation-rna	−	136466	136538	72
rps7	gene	ribosomal-protein	+	139001	139469	468
ndhB	gene	nad-dehydrogenase	+	139743	141955	2212
trnL-CAA	gene	translation-rna	+	142490	142571	81
ycf15	gene	other	−	142831	143080	249
ycf2	gene	other	−	143122	150007	6885
trnI-CAU	gene	translation-rna	+	150095	150169	74
rpl23	gene	ribosomal-protein	+	150334	150616	282
rpl2	gene	ribosomal-protein	+	150634	152126	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR565931.1DNA · accDOR565931DNA · atpBOR565931DNA · matKOR565931DNA · ndhFOR565931DNA · psbAOR565931DNA · rbcLOR565931DNA · rps12OR565931DNA · ycf1OR565931