Paraphlomis foliata chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · OR565957.1 · 2–76 bp · −
psbA · OR565957.1 · 308–1,366 bp · −
trnK-UUU · OR565957.1 · 1,599–4,189 bp · −
matK · OR565957.1 · 1,905–3,440 bp · −
rps16 · OR565957.1 · 5,116–6,256 bp · −
trnQ-UUG · OR565957.1 · 7,205–7,276 bp · −
trnS-GCU · OR565957.1 · 8,404–8,491 bp · −
atpA · OR565957.1 · 10,298–11,821 bp · −
atpF · OR565957.1 · 11,909–13,129 bp · −
atpH · OR565957.1 · 13,498–13,743 bp · −
atpI · OR565957.1 · 14,738–15,481 bp · −
rps2 · OR565957.1 · 15,712–16,422 bp · −
rpoC2 · OR565957.1 · 16,745–20,830 bp · −
rpoC1 · OR565957.1 · 20,985–23,816 bp · −
rpoB · OR565957.1 · 23,843–27,055 bp · −
psbM · OR565957.1 · 29,946–30,050 bp · −
trnD-GUC · OR565957.1 · 30,574–30,647 bp · −
trnY-GUA · OR565957.1 · 30,762–30,845 bp · −
trnE-UUC · OR565957.1 · 30,905–30,977 bp · −
trnS-UGA · OR565957.1 · 35,520–35,612 bp · −
trnfM-CAU · OR565957.1 · 36,575–36,648 bp · −
rps14 · OR565957.1 · 36,798–37,100 bp · −
psaB · OR565957.1 · 37,228–39,432 bp · −
psaA · OR565957.1 · 39,458–41,710 bp · −
ycf3 · OR565957.1 · 42,438–44,396 bp · −
rps4 · OR565957.1 · 45,111–45,716 bp · −
trnT-UGU · OR565957.1 · 46,107–46,179 bp · −
ndhJ · OR565957.1 · 48,458–48,934 bp · −
ndhK · OR565957.1 · 49,035–49,712 bp · −
ndhC · OR565957.1 · 49,766–50,128 bp · −
trnV-UAC · OR565957.1 · 51,094–51,740 bp · −
atpE · OR565957.1 · 52,226–52,627 bp · −
atpB · OR565957.1 · 52,624–54,114 bp · −
psbJ · OR565957.1 · 63,804–63,926 bp · −
psbL · OR565957.1 · 64,064–64,180 bp · −
psbF · OR565957.1 · 64,204–64,323 bp · −
psbE · OR565957.1 · 64,338–64,589 bp · −
trnW-CCA · OR565957.1 · 66,026–66,099 bp · −
trnP-UGG · OR565957.1 · 66,269–66,342 bp · −
rpl20 · OR565957.1 · 68,049–68,435 bp · −
rps12 · OR565957.1 · 69,202–69,315 bp · −
rps12 · OR565957.1 · 96,557–97,350 bp · −
clpP · OR565957.1 · 69,442–71,306 bp · −
psbN · OR565957.1 · 73,630–73,761 bp · −
rpoA · OR565957.1 · 77,168–78,181 bp · −
rps11 · OR565957.1 · 78,253–78,684 bp · −
rpl36 · OR565957.1 · 78,772–78,885 bp · −
infA · OR565957.1 · 78,981–79,214 bp · −
rps8 · OR565957.1 · 79,339–79,752 bp · −
rpl14 · OR565957.1 · 79,943–80,311 bp · −
rpl16 · OR565957.1 · 80,438–81,744 bp · −
rps3 · OR565957.1 · 81,891–82,553 bp · −
rpl22 · OR565957.1 · 82,538–83,002 bp · −
rps19 · OR565957.1 · 83,062–83,340 bp · −
rpl2 · OR565957.1 · 83,393–84,884 bp · −
rpl23 · OR565957.1 · 84,903–85,184 bp · −
trnI-CAU · OR565957.1 · 85,350–85,423 bp · −
trnL-CAA · OR565957.1 · 92,930–93,010 bp · −
ndhB · OR565957.1 · 93,550–95,761 bp · −
rps7 · OR565957.1 · 96,036–96,503 bp · −
trnN-GUU · OR565957.1 · 107,451–107,522 bp · −
ndhF · OR565957.1 · 108,912–111,134 bp · −
ndhD · OR565957.1 · 113,857–115,377 bp · −
psaC · OR565957.1 · 115,476–115,721 bp · −
ndhE · OR565957.1 · 115,984–116,289 bp · −
ndhG · OR565957.1 · 116,511–117,041 bp · −
ndhI · OR565957.1 · 117,420–117,917 bp · −
ndhA · OR565957.1 · 118,004–120,172 bp · −
ndhH · OR565957.1 · 120,174–121,355 bp · −
rps15 · OR565957.1 · 121,456–121,728 bp · −
ycf1 · OR565957.1 · 122,109–127,661 bp · −
trnR-ACG · OR565957.1 · 128,626–128,698 bp · −
rrn5 · OR565957.1 · 128,933–129,053 bp · −
rrn4.5 · OR565957.1 · 129,309–129,411 bp · −
rrn23 · OR565957.1 · 129,510–132,319 bp · −
trnA-UGC · OR565957.1 · 132,512–133,390 bp · −
trnI-GAU · OR565957.1 · 133,455–134,463 bp · −
rrn16 · OR565957.1 · 134,753–136,243 bp · −
trnV-GAC · OR565957.1 · 136,471–136,542 bp · −
ycf15 · OR565957.1 · 142,840–143,103 bp · −
ycf2 · OR565957.1 · 143,131–149,997 bp · −
psbK · OR565957.1 · 7,613–7,798 bp · +
psbI · OR565957.1 · 8,169–8,279 bp · +
trnG-UCC · OR565957.1 · 9,194–9,953 bp · +
trnR-UCU · OR565957.1 · 10,130–10,201 bp · +
trnC-GCA · OR565957.1 · 28,157–28,232 bp · +
petN · OR565957.1 · 29,063–29,158 bp · +
trnT-GGU · OR565957.1 · 31,537–31,607 bp · +
psbD · OR565957.1 · 32,859–33,920 bp · +
psbC · OR565957.1 · 33,868–35,289 bp · +
psbZ · OR565957.1 · 35,937–36,125 bp · +
trnG-GCC · OR565957.1 · 36,355–36,425 bp · +
trnS-GGA · OR565957.1 · 44,726–44,812 bp · +
trnL-UAA · OR565957.1 · 46,858–47,431 bp · +
trnF-GAA · OR565957.1 · 47,723–47,795 bp · +
trnM-CAU · OR565957.1 · 51,930–52,001 bp · +
rbcL · OR565957.1 · 54,924–56,378 bp · +
accD · OR565957.1 · 57,068–58,534 bp · +
psaI · OR565957.1 · 59,221–59,331 bp · +
ycf4 · OR565957.1 · 59,767–60,321 bp · +
cemA · OR565957.1 · 60,889–61,578 bp · +
petA · OR565957.1 · 61,795–62,757 bp · +
petL · OR565957.1 · 65,517–65,612 bp · +
petG · OR565957.1 · 65,787–65,900 bp · +
psaJ · OR565957.1 · 66,617–66,751 bp · +
rpl33 · OR565957.1 · 67,217–67,417 bp · +
rps18 · OR565957.1 · 67,564–67,869 bp · +
rps12 · OR565957.1 · 138,159–138,952 bp · +
psbB · OR565957.1 · 71,744–73,270 bp · +
psbT · OR565957.1 · 73,462–73,569 bp · +
psbH · OR565957.1 · 73,865–74,086 bp · +
petB · OR565957.1 · 74,211–75,589 bp · +
petD · OR565957.1 · 75,784–77,005 bp · +
ycf2 · OR565957.1 · 85,512–92,378 bp · +
ycf15 · OR565957.1 · 92,421–92,669 bp · +
trnV-GAC · OR565957.1 · 98,967–99,038 bp · +
rrn16 · OR565957.1 · 99,266–100,756 bp · +
trnI-GAU · OR565957.1 · 101,046–102,054 bp · +
trnA-UGC · OR565957.1 · 102,119–102,997 bp · +
rrn23 · OR565957.1 · 103,190–105,999 bp · +
rrn4.5 · OR565957.1 · 106,098–106,200 bp · +
rrn5 · OR565957.1 · 106,456–106,576 bp · +
trnR-ACG · OR565957.1 · 106,811–106,883 bp · +
rpl32 · OR565957.1 · 111,639–111,815 bp · +
trnL-UAG · OR565957.1 · 112,539–112,618 bp · +
ccsA · OR565957.1 · 112,703–113,674 bp · +
trnN-GUU · OR565957.1 · 127,987–128,058 bp · +
rps7 · OR565957.1 · 139,006–139,473 bp · +
ndhB · OR565957.1 · 139,748–141,959 bp · +
trnL-CAA · OR565957.1 · 142,499–142,579 bp · +
trnI-CAU · OR565957.1 · 150,086–150,159 bp · +
rpl23 · OR565957.1 · 150,325–150,606 bp · +
rpl2 · OR565957.1 · 150,625–152,116 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Paraphlomis foliata
ANNOTATED PLASTOME
OR565957.1
152,210 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38052 76105 114158 152210 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 308 1366 1059 Locate
trnK-UUU gene − 1599 4189 2591 Locate
matK gene − 1905 3440 1536 Locate
rps16 gene − 5116 6256 1141 Locate
trnQ-UUG gene − 7205 7276 72 Locate
psbK gene + 7613 7798 186 Locate
psbI gene + 8169 8279 111 Locate
trnS-GCU gene − 8404 8491 88 Locate
trnG-UCC gene + 9194 9953 760 Locate
trnR-UCU gene + 10130 10201 72 Locate
atpA gene − 10298 11821 1524 Locate
atpF gene − 11909 13129 1221 Locate
atpH gene − 13498 13743 246 Locate
atpI gene − 14738 15481 744 Locate
rps2 gene − 15712 16422 711 Locate
rpoC2 gene − 16745 20830 4086 Locate
rpoC1 gene − 20985 23816 2832 Locate
rpoB gene − 23843 27055 3213 Locate
trnC-GCA gene + 28157 28232 76 Locate
petN gene + 29063 29158 96 Locate
psbM gene − 29946 30050 105 Locate
trnD-GUC gene − 30574 30647 74 Locate
trnY-GUA gene − 30762 30845 84 Locate
trnE-UUC gene − 30905 30977 73 Locate
trnT-GGU gene + 31537 31607 71 Locate
psbD gene + 32859 33920 1062 Locate
psbC gene + 33868 35289 1422 Locate
trnS-UGA gene − 35520 35612 93 Locate
psbZ gene + 35937 36125 189 Locate
trnG-GCC gene + 36355 36425 71 Locate
trnfM-CAU gene − 36575 36648 74 Locate
rps14 gene − 36798 37100 303 Locate
psaB gene − 37228 39432 2205 Locate
psaA gene − 39458 41710 2253 Locate
ycf3 gene − 42438 44396 1959 Locate
trnS-GGA gene + 44726 44812 87 Locate
rps4 gene − 45111 45716 606 Locate
trnT-UGU gene − 46107 46179 73 Locate
trnL-UAA gene + 46858 47431 574 Locate
trnF-GAA gene + 47723 47795 73 Locate
ndhJ gene − 48458 48934 477 Locate
ndhK gene − 49035 49712 678 Locate
ndhC gene − 49766 50128 363 Locate
trnV-UAC gene − 51094 51740 647 Locate
trnM-CAU gene + 51930 52001 72 Locate
atpE gene − 52226 52627 402 Locate
atpB gene − 52624 54114 1491 Locate
rbcL gene + 54924 56378 1455 Locate
accD gene + 57068 58534 1467 Locate
psaI gene + 59221 59331 111 Locate
ycf4 gene + 59767 60321 555 Locate
cemA gene + 60889 61578 690 Locate
petA gene + 61795 62757 963 Locate
psbJ gene − 63804 63926 123 Locate
psbL gene − 64064 64180 117 Locate
psbF gene − 64204 64323 120 Locate
psbE gene − 64338 64589 252 Locate
petL gene + 65517 65612 96 Locate
petG gene + 65787 65900 114 Locate
trnW-CCA gene − 66026 66099 74 Locate
trnP-UGG gene − 66269 66342 74 Locate
psaJ gene + 66617 66751 135 Locate
rpl33 gene + 67217 67417 201 Locate
rps18 gene + 67564 67869 306 Locate
rpl20 gene − 68049 68435 387 Locate
rps12 gene − 69202 69315 114 Locate
clpP gene − 69442 71306 1865 Locate
psbB gene + 71744 73270 1527 Locate
psbT gene + 73462 73569 108 Locate
psbN gene − 73630 73761 132 Locate
psbH gene + 73865 74086 222 Locate
petB gene + 74211 75589 1379 Locate
petD gene + 75784 77005 1222 Locate
rpoA gene − 77168 78181 1014 Locate
rps11 gene − 78253 78684 432 Locate
rpl36 gene − 78772 78885 114 Locate
infA gene − 78981 79214 234 Locate
rps8 gene − 79339 79752 414 Locate
rpl14 gene − 79943 80311 369 Locate
rpl16 gene − 80438 81744 1307 Locate
rps3 gene − 81891 82553 663 Locate
rpl22 gene − 82538 83002 465 Locate
rps19 gene − 83062 83340 279 Locate
rpl2 gene − 83393 84884 1492 Locate
rpl23 gene − 84903 85184 282 Locate
trnI-CAU gene − 85350 85423 74 Locate
ycf2 gene + 85512 92378 6867 Locate
ycf15 gene + 92421 92669 249 Locate
trnL-CAA gene − 92930 93010 81 Locate
ndhB gene − 93550 95761 2212 Locate
rps7 gene − 96036 96503 468 Locate
rps12 gene − 96557 97350 794 Locate
trnV-GAC gene + 98967 99038 72 Locate
rrn16 gene + 99266 100756 1491 Locate
trnI-GAU gene + 101046 102054 1009 Locate
trnA-UGC gene + 102119 102997 879 Locate
rrn23 gene + 103190 105999 2810 Locate
rrn4.5 gene + 106098 106200 103 Locate
rrn5 gene + 106456 106576 121 Locate
trnR-ACG gene + 106811 106883 73 Locate
trnN-GUU gene − 107451 107522 72 Locate
ndhF gene − 108912 111134 2223 Locate
rpl32 gene + 111639 111815 177 Locate
trnL-UAG gene + 112539 112618 80 Locate
ccsA gene + 112703 113674 972 Locate
ndhD gene − 113857 115377 1521 Locate
psaC gene − 115476 115721 246 Locate
ndhE gene − 115984 116289 306 Locate
ndhG gene − 116511 117041 531 Locate
ndhI gene − 117420 117917 498 Locate
ndhA gene − 118004 120172 2169 Locate
ndhH gene − 120174 121355 1182 Locate
rps15 gene − 121456 121728 273 Locate
ycf1 gene − 122109 127661 5553 Locate
trnN-GUU gene + 127987 128058 72 Locate
trnR-ACG gene − 128626 128698 73 Locate
rrn5 gene − 128933 129053 121 Locate
rrn4.5 gene − 129309 129411 103 Locate
rrn23 gene − 129510 132319 2810 Locate
trnA-UGC gene − 132512 133390 879 Locate
trnI-GAU gene − 133455 134463 1009 Locate
rrn16 gene − 134753 136243 1491 Locate
trnV-GAC gene − 136471 136542 72 Locate
rps12 gene + 138159 138952 794 Locate
rps7 gene + 139006 139473 468 Locate
ndhB gene + 139748 141959 2212 Locate
trnL-CAA gene + 142499 142579 81 Locate
ycf15 gene − 142840 143103 264 Locate
ycf2 gene − 143131 149997 6867 Locate
trnI-CAU gene + 150086 150159 74 Locate
rpl23 gene + 150325 150606 282 Locate
rpl2 gene + 150625 152116 1492 Locate
Status Available
Accession OR565957.1
Length 152,210 bp
GC content 38.4%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources