Coordinate-aware organelle record

Paraphlomis formosana chloroplast genome

Available OR565953.1 152,198 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	306	1365	1059
trnK-UUU	gene	translation-rna	−	1597	4181	2584
matK	gene	other	−	1896	3432	1536
rps16	gene	ribosomal-protein	−	5108	6254	1146
trnQ-UUG	gene	translation-rna	−	7201	7273	72
psbK	gene	photosystem-ii	+	7609	7795	186
psbI	gene	photosystem-ii	+	8173	8284	111
trnS-GCU	gene	translation-rna	−	8406	8494	88
trnG-UCC	gene	translation-rna	+	9185	9936	751
trnR-UCU	gene	translation-rna	+	10112	10184	72
atpA	gene	atp-synthase	−	10280	11804	1524
atpF	gene	atp-synthase	−	11891	13112	1221
atpH	gene	atp-synthase	−	13477	13723	246
atpI	gene	atp-synthase	−	14758	15502	744
rps2	gene	ribosomal-protein	−	15732	16443	711
rpoC2	gene	rna-polymerase	−	16663	20851	4188
rpoC1	gene	rna-polymerase	−	21005	23836	2831
rpoB	gene	rna-polymerase	−	23862	27075	3213
trnC-GCA	gene	translation-rna	+	28176	28252	76
petN	gene	cytochrome	+	29088	29178	90
psbM	gene	photosystem-ii	−	29965	30070	105
trnD-GUC	gene	translation-rna	−	30593	30667	74
trnY-GUA	gene	translation-rna	−	30781	30865	84
trnE-UUC	gene	translation-rna	−	30924	30994	70
trnT-GGU	gene	translation-rna	+	31556	31627	71
psbD	gene	photosystem-ii	+	32877	33939	1062
psbC	gene	photosystem-ii	+	33886	35308	1422
trnS-UGA	gene	translation-rna	−	35540	35633	93
psbZ	gene	photosystem-ii	+	35958	36147	189
trnG-GCC	gene	translation-rna	+	36371	36442	71
trnfM-CAU	gene	translation-rna	−	36591	36665	74
rps14	gene	ribosomal-protein	−	36814	37117	303
psaB	gene	photosystem-i	−	37244	39449	2205
psaA	gene	photosystem-i	−	39474	41727	2253
ycf3	gene	other	−	42454	44408	1954
trnS-GGA	gene	translation-rna	+	44724	44811	87
rps4	gene	ribosomal-protein	−	45108	45714	606
trnT-UGU	gene	translation-rna	−	46104	46177	73
trnL-UAA	gene	translation-rna	+	46850	47424	574
trnF-GAA	gene	translation-rna	+	47715	47788	73
ndhJ	gene	nad-dehydrogenase	−	48456	48951	495
ndhK	gene	nad-dehydrogenase	−	49033	49711	678
ndhC	gene	nad-dehydrogenase	−	49764	50127	363
trnV-UAC	gene	translation-rna	−	51092	51745	653
trnM-CAU	gene	translation-rna	+	51934	52006	72
atpE	gene	atp-synthase	−	52223	52625	402
atpB	gene	atp-synthase	−	52621	54112	1491
rbcL	gene	other	+	54899	56354	1455
accD	gene	other	+	57039	58506	1467
psaI	gene	photosystem-i	+	59194	59305	111
ycf4	gene	other	+	59740	60295	555
cemA	gene	other	+	60855	61545	690
petA	gene	cytochrome	+	61761	62724	963
psbJ	gene	photosystem-ii	−	63770	63893	123
psbL	gene	photosystem-ii	−	64030	64147	117
psbF	gene	photosystem-ii	−	64170	64290	120
psbE	gene	photosystem-ii	−	64304	64556	252
petL	gene	cytochrome	+	65487	65583	96
petG	gene	cytochrome	+	65757	65871	114
trnW-CCA	gene	translation-rna	−	65996	66070	74
trnP-UGG	gene	translation-rna	−	66239	66313	74
psaJ	gene	photosystem-i	+	66587	66722	135
rpl33	gene	ribosomal-protein	+	67192	67393	201
rps18	gene	ribosomal-protein	+	67539	67845	306
rpl20	gene	ribosomal-protein	−	68024	68411	387
rps12	gene	ribosomal-protein	−	69177	97330	28153
rps12	gene	ribosomal-protein	+	69177	138927	69750
clpP	gene	other	−	69417	71283	1866
psbB	gene	photosystem-ii	+	71720	73247	1527
psbT	gene	photosystem-ii	+	73433	73541	108
psbN	gene	photosystem-ii	−	73601	73733	132
psbH	gene	photosystem-ii	+	73836	74058	222
petB	gene	cytochrome	+	74172	75552	1380
petD	gene	cytochrome	+	75746	76968	1222
rpoA	gene	rna-polymerase	−	77130	78144	1014
rps11	gene	ribosomal-protein	−	78215	78647	432
rpl36	gene	ribosomal-protein	−	78734	78848	114
infA	gene	other	−	78943	79177	234
rps8	gene	ribosomal-protein	−	79305	79719	414
rpl14	gene	ribosomal-protein	−	79909	80278	369
rpl16	gene	ribosomal-protein	−	80404	81711	1307
rps3	gene	ribosomal-protein	−	81857	82520	663
rpl22	gene	ribosomal-protein	−	82504	82969	465
rps19	gene	ribosomal-protein	−	83028	83307	279
rpl2	gene	ribosomal-protein	−	83358	84850	1492
rpl23	gene	ribosomal-protein	−	84868	85150	282
trnI-CAU	gene	translation-rna	−	85315	85389	74
ycf2	gene	other	+	85477	92362	6885
ycf15	gene	other	+	92404	92653	249
trnL-CAA	gene	translation-rna	−	92913	92994	81
ndhB	gene	nad-dehydrogenase	−	93529	95741	2212
rps7	gene	ribosomal-protein	−	96015	96483	468
trnV-GAC	gene	translation-rna	+	98946	99018	72
rrn16	gene	ribosomal-rna	+	99245	100736	1491
trnI-GAU	gene	translation-rna	+	101025	102034	1009
trnA-UGC	gene	translation-rna	+	102098	102977	879
rrn23	gene	ribosomal-rna	+	103169	105979	2810
rrn4.5	gene	ribosomal-rna	+	106077	106180	103
rrn5	gene	ribosomal-rna	+	106435	106556	121
trnR-ACG	gene	translation-rna	+	106790	106864	74
trnN-GUU	gene	translation-rna	−	107430	107502	72
ndhF	gene	nad-dehydrogenase	−	108891	111108	2217
rpl32	gene	ribosomal-protein	+	111612	111789	177
trnL-UAG	gene	translation-rna	+	112512	112592	80
ccsA	gene	other	+	112676	113648	972
ndhD	gene	nad-dehydrogenase	−	113830	115351	1521
psaC	gene	photosystem-i	−	115451	115697	246
ndhE	gene	nad-dehydrogenase	−	115959	116265	306
ndhG	gene	nad-dehydrogenase	−	116486	117017	531
ndhI	gene	nad-dehydrogenase	−	117395	117902	507
ndhA	gene	nad-dehydrogenase	−	117988	120147	2159
ndhH	gene	nad-dehydrogenase	−	120148	121330	1182
rps15	gene	ribosomal-protein	−	121430	121766	336
ycf1	gene	other	−	122083	127636	5553
trnN-GUU	gene	translation-rna	+	127961	128033	72
trnR-ACG	gene	translation-rna	−	128599	128673	74
rrn5	gene	ribosomal-rna	−	128907	129028	121
rrn4.5	gene	ribosomal-rna	−	129283	129386	103
rrn23	gene	ribosomal-rna	−	129484	132294	2810
trnA-UGC	gene	translation-rna	−	132486	133365	879
trnI-GAU	gene	translation-rna	−	133429	134438	1009
rrn16	gene	ribosomal-rna	−	134727	136218	1491
trnV-GAC	gene	translation-rna	−	136445	136517	72
rps7	gene	ribosomal-protein	+	138980	139448	468
ndhB	gene	nad-dehydrogenase	+	139722	141934	2212
trnL-CAA	gene	translation-rna	+	142469	142550	81
ycf15	gene	other	−	142810	143059	249
ycf2	gene	other	−	143101	149986	6885
trnI-CAU	gene	translation-rna	+	150074	150148	74
rpl23	gene	ribosomal-protein	+	150313	150595	282
rpl2	gene	ribosomal-protein	+	150613	152105	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR565953.1DNA · accDOR565953DNA · atpBOR565953DNA · matKOR565953DNA · ndhFOR565953DNA · psbAOR565953DNA · rbcLOR565953DNA · rps12OR565953DNA · ycf1OR565953