Coordinate-aware organelle record

Paraphlomis hirsutissima chloroplast genome

Available OR565958.1 152,222 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	307	1366	1059
trnK-UUU	gene	translation-rna	−	1598	4188	2590
matK	gene	other	−	1903	3439	1536
rps16	gene	ribosomal-protein	−	5114	6255	1141
trnQ-UUG	gene	translation-rna	−	7202	7274	72
psbK	gene	photosystem-ii	+	7610	7796	186
psbI	gene	photosystem-ii	+	8171	8282	111
trnS-GCU	gene	translation-rna	−	8413	8501	88
trnG-UCC	gene	translation-rna	+	9200	9960	760
trnR-UCU	gene	translation-rna	+	10136	10208	72
atpA	gene	atp-synthase	−	10304	11828	1524
atpF	gene	atp-synthase	−	11915	13138	1223
atpH	gene	atp-synthase	−	13504	13750	246
atpI	gene	atp-synthase	−	14749	15493	744
rps2	gene	ribosomal-protein	−	15723	16434	711
rpoC2	gene	rna-polymerase	−	16733	20843	4110
rpoC1	gene	rna-polymerase	−	20997	23829	2832
rpoB	gene	rna-polymerase	−	23855	27068	3213
trnC-GCA	gene	translation-rna	+	28169	28245	76
petN	gene	cytochrome	+	29075	29171	96
psbM	gene	photosystem-ii	−	29946	30051	105
trnD-GUC	gene	translation-rna	−	30574	30648	74
trnY-GUA	gene	translation-rna	−	30762	30846	84
trnE-UUC	gene	translation-rna	−	30905	30975	70
trnT-GGU	gene	translation-rna	+	31537	31608	71
psbD	gene	photosystem-ii	+	32859	33921	1062
psbC	gene	photosystem-ii	+	33868	35290	1422
trnS-UGA	gene	translation-rna	−	35520	35613	93
psbZ	gene	photosystem-ii	+	35937	36126	189
trnG-GCC	gene	translation-rna	+	36355	36426	71
trnfM-CAU	gene	translation-rna	−	36575	36649	74
rps14	gene	ribosomal-protein	−	36798	37101	303
psaB	gene	photosystem-i	−	37228	39433	2205
psaA	gene	photosystem-i	−	39458	41711	2253
ycf3	gene	other	−	42446	44402	1956
trnS-GGA	gene	translation-rna	+	44731	44818	87
rps4	gene	ribosomal-protein	−	45142	45748	606
trnT-UGU	gene	translation-rna	−	46138	46211	73
trnL-UAA	gene	translation-rna	+	46888	47462	574
trnF-GAA	gene	translation-rna	+	47753	47826	73
ndhJ	gene	nad-dehydrogenase	−	48488	48965	477
ndhK	gene	nad-dehydrogenase	−	49065	49743	678
ndhC	gene	nad-dehydrogenase	−	49796	50159	363
trnV-UAC	gene	translation-rna	−	51124	51771	647
trnM-CAU	gene	translation-rna	+	51959	52032	73
atpE	gene	atp-synthase	−	52249	52651	402
atpB	gene	atp-synthase	−	52647	54138	1491
rbcL	gene	other	+	54947	56402	1455
accD	gene	other	+	57091	58558	1467
psaI	gene	photosystem-i	+	59244	59355	111
ycf4	gene	other	+	59790	60345	555
cemA	gene	other	+	60912	61602	690
petA	gene	cytochrome	+	61818	62781	963
psbJ	gene	photosystem-ii	−	63825	63948	123
psbL	gene	photosystem-ii	−	64085	64202	117
psbF	gene	photosystem-ii	−	64225	64345	120
psbE	gene	photosystem-ii	−	64359	64611	252
petL	gene	cytochrome	+	65538	65634	96
petG	gene	cytochrome	+	65808	65922	114
trnW-CCA	gene	translation-rna	−	66047	66121	74
trnP-UGG	gene	translation-rna	−	66290	66364	74
psaJ	gene	photosystem-i	+	66638	66773	135
rpl33	gene	ribosomal-protein	+	67245	67446	201
rps18	gene	ribosomal-protein	+	67592	67898	306
rpl20	gene	ribosomal-protein	−	68077	68464	387
rps12	gene	ribosomal-protein	−	69230	97362	28132
rps12	gene	ribosomal-protein	+	69230	138964	69734
clpP	gene	other	−	69470	71335	1865
psbB	gene	photosystem-ii	+	71772	73299	1527
psbT	gene	photosystem-ii	+	73491	73599	108
psbN	gene	photosystem-ii	−	73659	73791	132
psbH	gene	photosystem-ii	+	73894	74116	222
petB	gene	cytochrome	+	74240	75619	1379
petD	gene	cytochrome	+	75813	77035	1222
rpoA	gene	rna-polymerase	−	77197	78211	1014
rps11	gene	ribosomal-protein	−	78282	78714	432
rpl36	gene	ribosomal-protein	−	78801	78915	114
infA	gene	other	−	79010	79244	234
rps8	gene	ribosomal-protein	−	79368	79782	414
rpl14	gene	ribosomal-protein	−	79954	80323	369
rpl16	gene	ribosomal-protein	−	80449	81756	1307
rps3	gene	ribosomal-protein	−	81902	82565	663
rpl22	gene	ribosomal-protein	−	82549	83014	465
rps19	gene	ribosomal-protein	−	83073	83352	279
rpl2	gene	ribosomal-protein	−	83404	84896	1492
rpl23	gene	ribosomal-protein	−	84914	85196	282
trnI-CAU	gene	translation-rna	−	85361	85435	74
ycf2	gene	other	+	85523	92390	6867
ycf15	gene	other	+	92432	92681	249
trnL-CAA	gene	translation-rna	−	92941	93022	81
ndhB	gene	nad-dehydrogenase	−	93561	95773	2212
rps7	gene	ribosomal-protein	−	96047	96515	468
trnV-GAC	gene	translation-rna	+	98978	99050	72
rrn16	gene	ribosomal-rna	+	99277	100768	1491
trnI-GAU	gene	translation-rna	+	101057	102066	1009
trnA-UGC	gene	translation-rna	+	102130	103009	879
rrn23	gene	ribosomal-rna	+	103201	106011	2810
rrn4.5	gene	ribosomal-rna	+	106109	106212	103
rrn5	gene	ribosomal-rna	+	106467	106588	121
trnR-ACG	gene	translation-rna	+	106822	106895	73
trnN-GUU	gene	translation-rna	−	107462	107534	72
ndhF	gene	nad-dehydrogenase	−	108923	111146	2223
rpl32	gene	ribosomal-protein	+	111650	111827	177
trnL-UAG	gene	translation-rna	+	112550	112630	80
ccsA	gene	other	+	112714	113686	972
ndhD	gene	nad-dehydrogenase	−	113868	115389	1521
psaC	gene	photosystem-i	−	115487	115733	246
ndhE	gene	nad-dehydrogenase	−	115995	116301	306
ndhG	gene	nad-dehydrogenase	−	116522	117053	531
ndhI	gene	nad-dehydrogenase	−	117431	117929	498
ndhA	gene	nad-dehydrogenase	−	118015	120175	2160
ndhH	gene	nad-dehydrogenase	−	120176	121358	1182
rps15	gene	ribosomal-protein	−	121458	121731	273
ycf1	gene	other	−	122111	127673	5562
trnN-GUU	gene	translation-rna	+	127998	128070	72
trnR-ACG	gene	translation-rna	−	128637	128710	73
rrn5	gene	ribosomal-rna	−	128944	129065	121
rrn4.5	gene	ribosomal-rna	−	129320	129423	103
rrn23	gene	ribosomal-rna	−	129521	132331	2810
trnA-UGC	gene	translation-rna	−	132523	133402	879
trnI-GAU	gene	translation-rna	−	133466	134475	1009
rrn16	gene	ribosomal-rna	−	134764	136255	1491
trnV-GAC	gene	translation-rna	−	136482	136554	72
rps7	gene	ribosomal-protein	+	139017	139485	468
ndhB	gene	nad-dehydrogenase	+	139759	141971	2212
trnL-CAA	gene	translation-rna	+	142510	142591	81
ycf15	gene	other	−	142851	143100	249
ycf2	gene	other	−	143142	150009	6867
trnI-CAU	gene	translation-rna	+	150097	150171	74
rpl23	gene	ribosomal-protein	+	150336	150618	282
rpl2	gene	ribosomal-protein	+	150636	152128	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR565958.1DNA · accDOR565958DNA · atpBOR565958DNA · matKOR565958DNA · ndhFOR565958DNA · psbAOR565958DNA · rbcLOR565958DNA · rps12OR565958DNA · ycf1OR565958