Coordinate-aware organelle record

Paraphlomis intermedia chloroplast genome

Available OR565934.1 152,128 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	306	1365	1059
trnK-UUU	gene	translation-rna	−	1597	4186	2589
matK	gene	other	−	1901	3437	1536
rps16	gene	ribosomal-protein	−	5113	6254	1141
trnQ-UUG	gene	translation-rna	−	7197	7269	72
psbK	gene	photosystem-ii	+	7605	7791	186
psbI	gene	photosystem-ii	+	8169	8280	111
trnS-GCU	gene	translation-rna	−	8404	8492	88
trnG-UCC	gene	translation-rna	+	9183	9934	751
trnR-UCU	gene	translation-rna	+	10110	10182	72
atpA	gene	atp-synthase	−	10278	11802	1524
atpF	gene	atp-synthase	−	11889	13102	1213
atpH	gene	atp-synthase	−	13469	13715	246
atpI	gene	atp-synthase	−	14715	15459	744
rps2	gene	ribosomal-protein	−	15689	16400	711
rpoC2	gene	rna-polymerase	−	16699	20815	4116
rpoC1	gene	rna-polymerase	−	20969	23801	2832
rpoB	gene	rna-polymerase	−	23827	27040	3213
trnC-GCA	gene	translation-rna	+	28141	28217	76
petN	gene	cytochrome	+	29053	29143	90
psbM	gene	photosystem-ii	−	29931	30036	105
trnD-GUC	gene	translation-rna	−	30559	30633	74
trnY-GUA	gene	translation-rna	−	30747	30831	84
trnE-UUC	gene	translation-rna	−	30890	30963	73
trnT-GGU	gene	translation-rna	+	31522	31593	71
psbD	gene	photosystem-ii	+	32842	33904	1062
psbC	gene	photosystem-ii	+	33851	35273	1422
trnS-UGA	gene	translation-rna	−	35506	35599	93
psbZ	gene	photosystem-ii	+	35924	36113	189
trnG-GCC	gene	translation-rna	+	36336	36407	71
trnfM-CAU	gene	translation-rna	−	36556	36630	74
rps14	gene	ribosomal-protein	−	36779	37082	303
psaB	gene	photosystem-i	−	37209	39414	2205
psaA	gene	photosystem-i	−	39439	41692	2253
ycf3	gene	other	−	42419	44375	1956
trnS-GGA	gene	translation-rna	+	44704	44791	87
rps4	gene	ribosomal-protein	−	45088	45694	606
trnT-UGU	gene	translation-rna	−	46086	46159	73
trnL-UAA	gene	translation-rna	+	46834	47409	575
trnF-GAA	gene	translation-rna	+	47700	47773	73
ndhJ	gene	nad-dehydrogenase	−	48435	48930	495
ndhK	gene	nad-dehydrogenase	−	49012	49690	678
ndhC	gene	nad-dehydrogenase	−	49742	50105	363
trnV-UAC	gene	translation-rna	−	51070	51723	653
trnM-CAU	gene	translation-rna	+	51911	51984	73
atpE	gene	atp-synthase	−	52201	52603	402
atpB	gene	atp-synthase	−	52599	54096	1497
rbcL	gene	other	+	54898	56344	1446
accD	gene	other	+	56990	58457	1467
psaI	gene	photosystem-i	+	59144	59255	111
ycf4	gene	other	+	59690	60245	555
cemA	gene	other	+	60805	61495	690
petA	gene	cytochrome	+	61711	62674	963
psbJ	gene	photosystem-ii	−	63718	63841	123
psbL	gene	photosystem-ii	−	63978	64095	117
psbF	gene	photosystem-ii	−	64118	64238	120
psbE	gene	photosystem-ii	−	64252	64504	252
petL	gene	cytochrome	+	65433	65529	96
petG	gene	cytochrome	+	65703	65817	114
trnW-CCA	gene	translation-rna	−	65942	66016	74
trnP-UGG	gene	translation-rna	−	66185	66259	74
psaJ	gene	photosystem-i	+	66533	66668	135
rpl33	gene	ribosomal-protein	+	67137	67338	201
rps18	gene	ribosomal-protein	+	67484	67790	306
rpl20	gene	ribosomal-protein	−	67969	68356	387
rps12	gene	ribosomal-protein	−	69111	97264	28153
rps12	gene	ribosomal-protein	+	69111	138871	69760
clpP	gene	other	−	69351	71219	1868
psbB	gene	photosystem-ii	+	71657	73184	1527
psbT	gene	photosystem-ii	+	73374	73482	108
psbN	gene	photosystem-ii	−	73542	73674	132
psbH	gene	photosystem-ii	+	73777	73999	222
petB	gene	cytochrome	+	74123	75505	1382
petD	gene	cytochrome	+	75699	76921	1222
rpoA	gene	rna-polymerase	−	77083	78097	1014
rps11	gene	ribosomal-protein	−	78168	78600	432
rpl36	gene	ribosomal-protein	−	78687	78801	114
infA	gene	other	−	78896	79130	234
rps8	gene	ribosomal-protein	−	79253	79667	414
rpl14	gene	ribosomal-protein	−	79857	80226	369
rpl16	gene	ribosomal-protein	−	80352	81659	1307
rps3	gene	ribosomal-protein	−	81805	82468	663
rpl22	gene	ribosomal-protein	−	82452	82917	465
rps19	gene	ribosomal-protein	−	82976	83255	279
rpl2	gene	ribosomal-protein	−	83306	84798	1492
rpl23	gene	ribosomal-protein	−	84816	85098	282
trnI-CAU	gene	translation-rna	−	85263	85337	74
ycf2	gene	other	+	85425	92292	6867
ycf15	gene	other	+	92334	92583	249
trnL-CAA	gene	translation-rna	−	92843	92924	81
ndhB	gene	nad-dehydrogenase	−	93463	95675	2212
rps7	gene	ribosomal-protein	−	95949	96417	468
trnV-GAC	gene	translation-rna	+	98880	98952	72
rrn16	gene	ribosomal-rna	+	99179	100670	1491
trnI-GAU	gene	translation-rna	+	100959	101968	1009
trnA-UGC	gene	translation-rna	+	102032	102911	879
rrn23	gene	ribosomal-rna	+	103103	105913	2810
rrn4.5	gene	ribosomal-rna	+	106011	106114	103
rrn5	gene	ribosomal-rna	+	106369	106490	121
trnR-ACG	gene	translation-rna	+	106724	106797	73
trnN-GUU	gene	translation-rna	−	107364	107436	72
ndhF	gene	nad-dehydrogenase	−	108825	111048	2223
rpl32	gene	ribosomal-protein	+	111555	111732	177
trnL-UAG	gene	translation-rna	+	112455	112535	80
ccsA	gene	other	+	112619	113591	972
ndhD	gene	nad-dehydrogenase	−	113773	115294	1521
psaC	gene	photosystem-i	−	115393	115639	246
ndhE	gene	nad-dehydrogenase	−	115901	116207	306
ndhG	gene	nad-dehydrogenase	−	116428	116959	531
ndhI	gene	nad-dehydrogenase	−	117338	117845	507
ndhA	gene	nad-dehydrogenase	−	117931	120091	2160
ndhH	gene	nad-dehydrogenase	−	120092	121274	1182
rps15	gene	ribosomal-protein	−	121374	121647	273
ycf1	gene	other	−	122027	127580	5553
trnN-GUU	gene	translation-rna	+	127905	127977	72
trnR-ACG	gene	translation-rna	−	128544	128617	73
rrn5	gene	ribosomal-rna	−	128851	128972	121
rrn4.5	gene	ribosomal-rna	−	129227	129330	103
rrn23	gene	ribosomal-rna	−	129428	132238	2810
trnA-UGC	gene	translation-rna	−	132430	133309	879
trnI-GAU	gene	translation-rna	−	133373	134382	1009
rrn16	gene	ribosomal-rna	−	134671	136162	1491
trnV-GAC	gene	translation-rna	−	136389	136461	72
rps7	gene	ribosomal-protein	+	138924	139392	468
ndhB	gene	nad-dehydrogenase	+	139666	141878	2212
trnL-CAA	gene	translation-rna	+	142417	142498	81
ycf15	gene	other	−	142758	143007	249
ycf2	gene	other	−	143049	149916	6867
trnI-CAU	gene	translation-rna	+	150004	150078	74
rpl23	gene	ribosomal-protein	+	150243	150525	282
rpl2	gene	ribosomal-protein	+	150543	152035	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeOR565934.1DNA · accDOR565934DNA · atpBOR565934DNA · matKOR565934DNA · ndhFOR565934DNA · psbAOR565934DNA · rbcLOR565934DNA · rps12OR565934DNA · ycf1OR565934